RNA–Protein interactions for RNA: ENST00000288398.10

TPM1-202, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,295 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-202ENST00000288398 LCA10Q71F78 164 aa6.35□□□□□ -1.39
TPM1-202ENST00000288398 TP53AIP1Q9HCN2 124 aa6.35□□□□□ -1.39
TPM1-202ENST00000288398 KRTAP3-1Q9BYR8 98 aa6.33□□□□□ -1.4
TPM1-202ENST00000288398 NEBP20929 6669 aa6.31□□□□□ -1.4
TPM1-202ENST00000288398 SPRR2GQ9BYE4 73 aa6.3□□□□□ -1.4
TPM1-202ENST00000288398 MT1BP07438 61 aa6.29□□□□□ -1.4
TPM1-202ENST00000288398 KLKP1Q107X0 134 aa6.29□□□□□ -1.4
TPM1-202ENST00000288398 KRTAP19-8Q3LI54 63 aa6.28□□□□□ -1.4
TPM1-202ENST00000288398 A0A087WVE0 104 aa6.25□□□□□ -1.41
TPM1-202ENST00000288398 ATOX1O00244 68 aa6.25□□□□□ -1.41
TPM1-202ENST00000288398 PCP4P48539 62 aa6.23□□□□□ -1.41
TPM1-202ENST00000288398 KRTAP10-5P60370 271 aa6.23□□□□□ -1.41
TPM1-202ENST00000288398 SMIM20Q8N5G0 67 aa6.23□□□□□ -1.41
TPM1-202ENST00000288398 CRIPTQ9P021 101 aa6.23□□□□□ -1.41
TPM1-202ENST00000288398 CYP4F30PQ9H0H9 118 aa6.2□□□□□ -1.42
TPM1-202ENST00000288398 LOC101927531A0A1B0GV80 90 aa6.19□□□□□ -1.42
TPM1-202ENST00000288398 ANAPC13Q9BS18 74 aa6.19□□□□□ -1.42
TPM1-202ENST00000288398 TRAV22A0A0B4J277 110 aa6.18□□□□□ -1.42
TPM1-202ENST00000288398 SERP2Q8N6R1 65 aa6.18□□□□□ -1.42
TPM1-202ENST00000288398 TRAV7A0A075B6U4 112 aa6.17□□□□□ -1.42
TPM1-202ENST00000288398 OCR1Q9BZK8 76 aa6.17□□□□□ -1.42
TPM1-202ENST00000288398 COX7CP15954 63 aa6.16□□□□□ -1.42
TPM1-202ENST00000288398 UQCRQO14949 82 aa6.15□□□□□ -1.42
TPM1-202ENST00000288398 NDUFC1O43677 76 aa6.14□□□□□ -1.43
TPM1-202ENST00000288398 KRTAP20-1Q3LI63 56 aa6.14□□□□□ -1.43
TPM1-202ENST00000288398 MUC12Q9UKN1 5478 aa6.13□□□□□ -1.43
TPM1-202ENST00000288398 KRTAP5-9P26371 169 aa6.09□□□□□ -1.43
TPM1-202ENST00000288398 H0Y9P7 68 aa6.07□□□□□ -1.44
TPM1-202ENST00000288398 H0YAA0 97 aa6.06□□□□□ -1.44
TPM1-202ENST00000288398 H3BPC8 53 aa6.05□□□□□ -1.44
TPM1-202ENST00000288398 CCDC179H3BU77 68 aa6.05□□□□□ -1.44
TPM1-202ENST00000288398 PRO2289Q9P1D8 64 aa6.05□□□□□ -1.44
TPM1-202ENST00000288398 A8MUN3 132 aa6.04□□□□□ -1.44
TPM1-202ENST00000288398 ADM2Q7Z4H4 148 aa6.03□□□□□ -1.44
TPM1-202ENST00000288398 KMT2DO14686 5537 aa6□□□□□ -1.45
TPM1-202ENST00000288398 PLAC4Q8WY50 150 aa5.99□□□□□ -1.45
TPM1-202ENST00000288398 C20orf197Q8N268 126 aa5.98□□□□□ -1.45
TPM1-202ENST00000288398 MDN1Q9NU22 5596 aa5.98□□□□□ -1.45
TPM1-202ENST00000288398 MP68P56378 58 aa5.96□□□□□ -1.46
TPM1-202ENST00000288398 LINC00208Q96KT6 92 aa5.95□□□□□ -1.46
TPM1-202ENST00000288398 SPRR2FQ96RM1 72 aa5.95□□□□□ -1.46
TPM1-202ENST00000288398 H7BZZ5 65 aa5.94□□□□□ -1.46
TPM1-202ENST00000288398 CYSTM1Q9H1C7 97 aa5.93□□□□□ -1.46
TPM1-202ENST00000288398 R4GN34 69 aa5.93□□□□□ -1.46
TPM1-202ENST00000288398 KRTAP2-3P0C7H8 128 aa5.92□□□□□ -1.46
TPM1-202ENST00000288398 KRTAP2-4Q9BYR9 128 aa5.92□□□□□ -1.46
TPM1-202ENST00000288398 SPRR2EP22531 72 aa5.91□□□□□ -1.46
TPM1-202ENST00000288398 SPRR2BP35325 72 aa5.91□□□□□ -1.46
TPM1-202ENST00000288398 SPRR2AP35326 72 aa5.91□□□□□ -1.46
TPM1-202ENST00000288398 TMEM258P61165 79 aa5.91□□□□□ -1.46
TPM1-202ENST00000288398 SNURFQ9Y675 71 aa5.9□□□□□ -1.46
TPM1-202ENST00000288398 KRTAP8-1Q8IUC2 63 aa5.89□□□□□ -1.47
TPM1-202ENST00000288398 MT1XP80297 61 aa5.87□□□□□ -1.47
TPM1-202ENST00000288398 SPANXA2-OT1Q8N9U9 137 aa5.87□□□□□ -1.47
TPM1-202ENST00000288398 M0QZ58 72 aa5.86□□□□□ -1.47
TPM1-202ENST00000288398 ATP5EP56381 51 aaPredicted RBP5.85□□□□□ -1.47
TPM1-202ENST00000288398 RPS28P62857 69 aaKnown RBP5.81□□□□□ -1.48
TPM1-202ENST00000288398 LINC01554Q52M75 96 aa5.81□□□□□ -1.48
TPM1-202ENST00000288398 P0C880 135 aa5.8□□□□□ -1.48
TPM1-202ENST00000288398 KRTAP12-2P59991 146 aa5.79□□□□□ -1.48
TPM1-202ENST00000288398 DMAC1Q96GE9 116 aa5.75□□□□□ -1.49
TPM1-202ENST00000288398 LCE1AQ5T7P2 110 aa5.74□□□□□ -1.49
TPM1-202ENST00000288398 SPRR2DP22532 72 aa5.73□□□□□ -1.49
TPM1-202ENST00000288398 KRTAP2-2Q9BYT5 123 aa5.72□□□□□ -1.49
TPM1-202ENST00000288398 KRTAP2-1Q9BYU5 128 aa5.72□□□□□ -1.49
TPM1-202ENST00000288398 SERP1Q9Y6X1 66 aa5.72□□□□□ -1.49
TPM1-202ENST00000288398 KRTAP4-8A0A0G2JLE6 195 aa5.67□□□□□ -1.5
TPM1-202ENST00000288398 SPTSSBQ8NFR3 76 aa5.67□□□□□ -1.5
TPM1-202ENST00000288398 KRTAP4-8Q9BYQ9 185 aa5.67□□□□□ -1.5
TPM1-202ENST00000288398 ACYP2P14621 99 aa5.64□□□□□ -1.51
TPM1-202ENST00000288398 KRTAP23-1A1A580 65 aa5.61□□□□□ -1.51
TPM1-202ENST00000288398 KRTAP10-7P60409 375 aaPredicted RBP5.61□□□□□ -1.51
TPM1-202ENST00000288398 CHKB-CPT1BH3BT56 60 aa5.6□□□□□ -1.51
TPM1-202ENST00000288398 SMIM26A0A096LP01 95 aa5.58□□□□□ -1.52
TPM1-202ENST00000288398 KRTAP10-12P60413 245 aa5.58□□□□□ -1.52
TPM1-202ENST00000288398 COA5Q86WW8 74 aa5.58□□□□□ -1.52
TPM1-202ENST00000288398 LCE3BQ5TA77 95 aa5.56□□□□□ -1.52
TPM1-202ENST00000288398 Q1T7F1 81 aa5.5□□□□□ -1.53
TPM1-202ENST00000288398 V9GYY9 64 aa5.48□□□□□ -1.53
TPM1-202ENST00000288398 CAMK2N1Q7Z7J9 78 aa5.47□□□□□ -1.53
TPM1-202ENST00000288398 LINC01558Q9Y6Z2 57 aa5.44□□□□□ -1.54
TPM1-202ENST00000288398 A0A0A0MQY5 61 aa5.41□□□□□ -1.54
TPM1-202ENST00000288398 KRTAP13-4Q3LI77 160 aa5.32□□□□□ -1.56
TPM1-202ENST00000288398 SEC61GP60059 68 aa5.31□□□□□ -1.56
TPM1-202ENST00000288398 PRR15LQ9BU68 103 aa5.28□□□□□ -1.56
TPM1-202ENST00000288398 KRTAP19-4Q3LI73 84 aa5.27□□□□□ -1.57
TPM1-202ENST00000288398 A0A1B0GU69 56 aa5.26□□□□□ -1.57
TPM1-202ENST00000288398 A0A0D9SG42 100 aa5.25□□□□□ -1.57
TPM1-202ENST00000288398 LCE5AQ5TCM9 118 aa5.25□□□□□ -1.57
TPM1-202ENST00000288398 KRTAP19-3Q7Z4W3 81 aa5.25□□□□□ -1.57
TPM1-202ENST00000288398 DSTQ03001 7570 aaKnown RBP5.25□□□□□ -1.57
TPM1-202ENST00000288398 GPR98Q8WXG9 6306 aa5.25□□□□□ -1.57
TPM1-202ENST00000288398 PSPHP1O15172 72 aa5.24□□□□□ -1.57
TPM1-202ENST00000288398 MT1EP04732 61 aa5.23□□□□□ -1.57
TPM1-202ENST00000288398 KRTAP19-7Q3SYF9 63 aa5.23□□□□□ -1.57
TPM1-202ENST00000288398 SPINT4Q6UDR6 99 aa5.21□□□□□ -1.58
TPM1-202ENST00000288398 KRTAP4-9Q9BYQ8 210 aa5.19□□□□□ -1.58
TPM1-202ENST00000288398 SPATA8Q6RVD6 105 aa5.16□□□□□ -1.58
TPM1-202ENST00000288398 UQCR11O14957 56 aa5.15□□□□□ -1.59
TPM1-202ENST00000288398 PP632Q6XCG6 107 aa5.15□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms