RNA–Protein interactions for RNA: ENST00000285176.13

CCDC144B-201, Transcript of coiled-coil domain containing 144B (pseudogene), humanhuman

BASIC

Gene CCDC144B, Length 4,310 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144B-201ENST00000285176 HSPG2P98160 4391 aa4.92□□□□□ -1.62
CCDC144B-201ENST00000285176 M0R2T5 61 aa4.91□□□□□ -1.62
CCDC144B-201ENST00000285176 RPS29P62273 56 aaKnown RBP4.91□□□□□ -1.62
CCDC144B-201ENST00000285176 PRAC1Q96KF2 57 aa4.89□□□□□ -1.63
CCDC144B-201ENST00000285176 MT1HL1P0DM35 61 aa4.87□□□□□ -1.63
CCDC144B-201ENST00000285176 CAMK2N1Q7Z7J9 78 aa4.87□□□□□ -1.63
CCDC144B-201ENST00000285176 R4GN34 69 aa4.86□□□□□ -1.63
CCDC144B-201ENST00000285176 XP32Q5T750 250 aa4.86□□□□□ -1.63
CCDC144B-201ENST00000285176 SPATA8Q6RVD6 105 aa4.86□□□□□ -1.63
CCDC144B-201ENST00000285176 ABCA13Q86UQ4 5058 aa4.84□□□□□ -1.64
CCDC144B-201ENST00000285176 KRTAP16-1A8MUX0 517 aa4.83□□□□□ -1.64
CCDC144B-201ENST00000285176 H1FX-AS1Q4G0G2 97 aa4.83□□□□□ -1.64
CCDC144B-201ENST00000285176 LRP2P98164 4655 aa4.82□□□□□ -1.64
CCDC144B-201ENST00000285176 A8MU10 97 aa4.81□□□□□ -1.64
CCDC144B-201ENST00000285176 RPL37P61927 97 aaKnown RBP4.81□□□□□ -1.64
CCDC144B-201ENST00000285176 ADM2Q7Z4H4 148 aa4.79□□□□□ -1.64
CCDC144B-201ENST00000285176 KRTAP13-3Q3SY46 172 aa4.79□□□□□ -1.64
CCDC144B-201ENST00000285176 A8MUU9 505 aa4.78□□□□□ -1.64
CCDC144B-201ENST00000285176 M0QZ58 72 aa4.78□□□□□ -1.64
CCDC144B-201ENST00000285176 C20orf166-AS1Q96NR2 134 aa4.77□□□□□ -1.65
CCDC144B-201ENST00000285176 HERC1Q15751 4861 aa4.76□□□□□ -1.65
CCDC144B-201ENST00000285176 LPAP08519 4548 aa4.76□□□□□ -1.65
CCDC144B-201ENST00000285176 BIRC6Q9NR09 4857 aa4.75□□□□□ -1.65
CCDC144B-201ENST00000285176 ROMO1P60602 79 aa4.7□□□□□ -1.66
CCDC144B-201ENST00000285176 TPRXLQ17RH7 258 aa4.7□□□□□ -1.66
CCDC144B-201ENST00000285176 PKHD1L1Q86WI1 4243 aa4.69□□□□□ -1.66
CCDC144B-201ENST00000285176 MUC2Q02817 5179 aa4.69□□□□□ -1.66
CCDC144B-201ENST00000285176 PCLOQ9Y6V0 5065 aa4.68□□□□□ -1.66
CCDC144B-201ENST00000285176 RNF213Q63HN8 5207 aa4.66□□□□□ -1.66
CCDC144B-201ENST00000285176 A6NN06 94 aa4.66□□□□□ -1.66
CCDC144B-201ENST00000285176 LUZP6Q538Z0 58 aa4.6□□□□□ -1.67
CCDC144B-201ENST00000285176 TNXBP22105 4242 aa4.59□□□□□ -1.67
CCDC144B-201ENST00000285176 UBR4Q5T4S7 5183 aa4.58□□□□□ -1.68
CCDC144B-201ENST00000285176 KRTAP3-1Q9BYR8 98 aa4.57□□□□□ -1.68
CCDC144B-201ENST00000285176 PLAC4Q8WY50 150 aa4.55□□□□□ -1.68
CCDC144B-201ENST00000285176 H0YAA0 97 aa4.52□□□□□ -1.69
CCDC144B-201ENST00000285176 KRTAP25-1Q3LHN0 102 aa4.51□□□□□ -1.69
CCDC144B-201ENST00000285176 KRTAP4-1Q9BYQ7 146 aa4.5□□□□□ -1.69
CCDC144B-201ENST00000285176 P0C880 135 aa4.49□□□□□ -1.69
CCDC144B-201ENST00000285176 FAT4Q6V0I7 4981 aa4.48□□□□□ -1.69
CCDC144B-201ENST00000285176 C10orf95Q9H7T3 257 aa4.41□□□□□ -1.7
CCDC144B-201ENST00000285176 H3BS24 57 aa4.4□□□□□ -1.71
CCDC144B-201ENST00000285176 TNP1P09430 55 aa4.36□□□□□ -1.71
CCDC144B-201ENST00000285176 FSIP2Q5CZC0 6907 aa4.36□□□□□ -1.71
CCDC144B-201ENST00000285176 HMCN2Q8NDA2 5059 aa4.35□□□□□ -1.71
CCDC144B-201ENST00000285176 KRTAP10-10P60014 251 aa4.34□□□□□ -1.71
CCDC144B-201ENST00000285176 KRTAP3-3Q9BYR6 98 aa4.33□□□□□ -1.72
CCDC144B-201ENST00000285176 NDUFAF8A1L188 74 aa4.28□□□□□ -1.72
CCDC144B-201ENST00000285176 A0A0A0MQY5 61 aa4.27□□□□□ -1.73
CCDC144B-201ENST00000285176 KRTAP13-4Q3LI77 160 aa4.27□□□□□ -1.73
CCDC144B-201ENST00000285176 KRTAP12-2P59991 146 aa4.26□□□□□ -1.73
CCDC144B-201ENST00000285176 LORP23490 312 aaPredicted RBP4.25□□□□□ -1.73
CCDC144B-201ENST00000285176 KRTAP10-6P60371 365 aaPredicted RBP4.24□□□□□ -1.73
CCDC144B-201ENST00000285176 PP632Q6XCG6 107 aa4.21□□□□□ -1.74
CCDC144B-201ENST00000285176 KRTAP12-1P59990 96 aa4.2□□□□□ -1.74
CCDC144B-201ENST00000285176 KRTAP3-2Q9BYR7 98 aa4.19□□□□□ -1.74
CCDC144B-201ENST00000285176 MT1HP80294 61 aa4.14□□□□□ -1.75
CCDC144B-201ENST00000285176 MUC17Q685J3 4493 aa4.11□□□□□ -1.75
CCDC144B-201ENST00000285176 PRO2289Q9P1D8 64 aa4.08□□□□□ -1.76
CCDC144B-201ENST00000285176 LCE2CQ5TA81 110 aa4.05□□□□□ -1.76
CCDC144B-201ENST00000285176 USH2AO75445 5202 aa4.04□□□□□ -1.76
CCDC144B-201ENST00000285176 FLGP20930 4061 aaPredicted RBP4.04□□□□□ -1.76
CCDC144B-201ENST00000285176 KRTAP19-2Q3LHN2 52 aa4.03□□□□□ -1.76
CCDC144B-201ENST00000285176 MT1FP04733 61 aa4.02□□□□□ -1.77
CCDC144B-201ENST00000285176 MT2AP02795 61 aa4.01□□□□□ -1.77
CCDC144B-201ENST00000285176 KRTAP9-8Q9BYQ0 159 aa3.89□□□□□ -1.79
CCDC144B-201ENST00000285176 KRTAP19-1Q8IUB9 90 aa3.85□□□□□ -1.79
CCDC144B-201ENST00000285176 KRTAP15-1Q3LI76 137 aa3.79□□□□□ -1.8
CCDC144B-201ENST00000285176 SPRR2GQ9BYE4 73 aa3.78□□□□□ -1.8
CCDC144B-201ENST00000285176 KMT2DO14686 5537 aa3.76□□□□□ -1.81
CCDC144B-201ENST00000285176 LCE2DQ5TA82 110 aaPredicted RBP3.76□□□□□ -1.81
CCDC144B-201ENST00000285176 KRTAP10-12P60413 245 aa3.75□□□□□ -1.81
CCDC144B-201ENST00000285176 LCE2AQ5TA79 106 aaPredicted RBP3.73□□□□□ -1.81
CCDC144B-201ENST00000285176 LCE2BO14633 110 aa3.73□□□□□ -1.81
CCDC144B-201ENST00000285176 KRTAP9-3Q9BYQ3 159 aa3.73□□□□□ -1.81
CCDC144B-201ENST00000285176 MT1BP07438 61 aa3.7□□□□□ -1.82
CCDC144B-201ENST00000285176 LCE3AQ5TA76 89 aa3.68□□□□□ -1.82
CCDC144B-201ENST00000285176 KRTAP12-3P60328 96 aa3.66□□□□□ -1.82
CCDC144B-201ENST00000285176 KRTAP10-7P60409 375 aaPredicted RBP3.62□□□□□ -1.83
CCDC144B-201ENST00000285176 MT1XP80297 61 aa3.61□□□□□ -1.83
CCDC144B-201ENST00000285176 KRTAP19-8Q3LI54 63 aa3.6□□□□□ -1.83
CCDC144B-201ENST00000285176 KRTAP4-8A0A0G2JLE6 195 aa3.6□□□□□ -1.83
CCDC144B-201ENST00000285176 KRTAP4-8Q9BYQ9 185 aa3.6□□□□□ -1.83
CCDC144B-201ENST00000285176 SSPOA2VEC9 5147 aa3.6□□□□□ -1.83
CCDC144B-201ENST00000285176 KRTAP23-1A1A580 65 aa3.59□□□□□ -1.83
CCDC144B-201ENST00000285176 KRTAP10-5P60370 271 aa3.59□□□□□ -1.84
CCDC144B-201ENST00000285176 DSTQ03001 7570 aaKnown RBP3.59□□□□□ -1.84
CCDC144B-201ENST00000285176 CRCT1Q9UGL9 99 aa3.56□□□□□ -1.84
CCDC144B-201ENST00000285176 SYNE2Q8WXH0 6885 aaKnown RBP3.53□□□□□ -1.84
CCDC144B-201ENST00000285176 KRTAP9-2Q9BYQ4 174 aa3.52□□□□□ -1.85
CCDC144B-201ENST00000285176 KRTAP8-1Q8IUC2 63 aa3.5□□□□□ -1.85
CCDC144B-201ENST00000285176 OBSCNQ5VST9 7968 aa3.5□□□□□ -1.85
CCDC144B-201ENST00000285176 MUC12Q9UKN1 5478 aa3.48□□□□□ -1.85
CCDC144B-201ENST00000285176 MACF1Q9UPN3 7388 aaKnown RBP3.46□□□□□ -1.85
CCDC144B-201ENST00000285176 FCGBPQ9Y6R7 5405 aaPredicted RBP3.46□□□□□ -1.85
CCDC144B-201ENST00000285176 KRTAP19-5Q3LI72 72 aa3.45□□□□□ -1.86
CCDC144B-201ENST00000285176 SPRR2FQ96RM1 72 aa3.43□□□□□ -1.86
CCDC144B-201ENST00000285176 SYNE1Q8NF91 8797 aaKnown RBP3.38□□□□□ -1.87
CCDC144B-201ENST00000285176 INE1O15225 51 aa3.35□□□□□ -1.87
CCDC144B-201ENST00000285176 KRTAP4-7Q9BYR0 210 aa3.33□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms