RNA–Protein interactions for RNA: ENST00000283290.9

ATG3-201, Transcript of autophagy related 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATG3, Length 1,570 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3-201ENST00000283290 H1FX-AS1Q4G0G2 97 aa8.48□□□□□ -1.05
ATG3-201ENST00000283290 TMEM258P61165 79 aa8.47□□□□□ -1.05
ATG3-201ENST00000283290 KRTAP9-8Q9BYQ0 159 aa8.44□□□□□ -1.06
ATG3-201ENST00000283290 LCE2BO14633 110 aa8.41□□□□□ -1.06
ATG3-201ENST00000283290 SPANXA2-OT1Q8N9U9 137 aa8.39□□□□□ -1.07
ATG3-201ENST00000283290 ATP5EP56381 51 aaPredicted RBP8.37□□□□□ -1.07
ATG3-201ENST00000283290 MT2AP02795 61 aa8.36□□□□□ -1.07
ATG3-201ENST00000283290 FSIP2Q5CZC0 6907 aa8.34□□□□□ -1.07
ATG3-201ENST00000283290 MT1FP04733 61 aa8.31□□□□□ -1.08
ATG3-201ENST00000283290 S4R3F8 94 aa8.31□□□□□ -1.08
ATG3-201ENST00000283290 LCA10Q71F78 164 aa8.31□□□□□ -1.08
ATG3-201ENST00000283290 KRTAP9-6A0A140TA67 174 aa8.27□□□□□ -1.09
ATG3-201ENST00000283290 KRTAP10-10P60014 251 aa8.25□□□□□ -1.09
ATG3-201ENST00000283290 DMAC1Q96GE9 116 aa8.23□□□□□ -1.09
ATG3-201ENST00000283290 CRCT1Q9UGL9 99 aa8.2□□□□□ -1.1
ATG3-201ENST00000283290 SERP1Q9Y6X1 66 aa8.2□□□□□ -1.1
ATG3-201ENST00000283290 USH2AO75445 5202 aa8.18□□□□□ -1.1
ATG3-201ENST00000283290 KRTAP9-3Q9BYQ3 159 aa8.17□□□□□ -1.1
ATG3-201ENST00000283290 A8MUN3 132 aa8.16□□□□□ -1.1
ATG3-201ENST00000283290 ACYP2P14621 99 aa8.16□□□□□ -1.1
ATG3-201ENST00000283290 RPS28P62857 69 aaKnown RBP8.16□□□□□ -1.1
ATG3-201ENST00000283290 LOC100996750A0A140TA64 210 aa8.15□□□□□ -1.1
ATG3-201ENST00000283290 CSAG1Q6PB30 78 aa8.15□□□□□ -1.1
ATG3-201ENST00000283290 KRTAP4-6Q9BYQ5 205 aa8.15□□□□□ -1.1
ATG3-201ENST00000283290 COA5Q86WW8 74 aa8.13□□□□□ -1.11
ATG3-201ENST00000283290 SSPOA2VEC9 5147 aa8.07□□□□□ -1.12
ATG3-201ENST00000283290 CHKB-CPT1BH3BT56 60 aa8.01□□□□□ -1.13
ATG3-201ENST00000283290 SMIM26A0A096LP01 95 aa7.97□□□□□ -1.13
ATG3-201ENST00000283290 ADM2Q7Z4H4 148 aa7.9□□□□□ -1.14
ATG3-201ENST00000283290 KRTAP19-1Q8IUB9 90 aa7.9□□□□□ -1.14
ATG3-201ENST00000283290 SPTSSBQ8NFR3 76 aa7.88□□□□□ -1.15
ATG3-201ENST00000283290 Q1T7F1 81 aa7.84□□□□□ -1.15
ATG3-201ENST00000283290 H0YAA0 97 aa7.83□□□□□ -1.16
ATG3-201ENST00000283290 FCGBPQ9Y6R7 5405 aaPredicted RBP7.82□□□□□ -1.16
ATG3-201ENST00000283290 V9GYY9 64 aa7.82□□□□□ -1.16
ATG3-201ENST00000283290 P0C880 135 aa7.8□□□□□ -1.16
ATG3-201ENST00000283290 LINC01558Q9Y6Z2 57 aa7.8□□□□□ -1.16
ATG3-201ENST00000283290 SPRR2GQ9BYE4 73 aa7.78□□□□□ -1.16
ATG3-201ENST00000283290 KRTAP19-6Q3LI70 58 aa7.75□□□□□ -1.17
ATG3-201ENST00000283290 MT1BP07438 61 aa7.71□□□□□ -1.18
ATG3-201ENST00000283290 PRR15LQ9BU68 103 aa7.7□□□□□ -1.18
ATG3-201ENST00000283290 CRIPTQ9P021 101 aa7.7□□□□□ -1.18
ATG3-201ENST00000283290 A0A1B0GU69 56 aa7.68□□□□□ -1.18
ATG3-201ENST00000283290 PSPHP1O15172 72 aa7.68□□□□□ -1.18
ATG3-201ENST00000283290 KRTAP19-8Q3LI54 63 aa7.68□□□□□ -1.18
ATG3-201ENST00000283290 Q5VV11 94 aa7.67□□□□□ -1.18
ATG3-201ENST00000283290 SEC61GP60059 68 aa7.64□□□□□ -1.19
ATG3-201ENST00000283290 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.63□□□□□ -1.19
ATG3-201ENST00000283290 M0QZ58 72 aa7.62□□□□□ -1.19
ATG3-201ENST00000283290 R4GN34 69 aa7.62□□□□□ -1.19
ATG3-201ENST00000283290 LINC01554Q52M75 96 aa7.55□□□□□ -1.2
ATG3-201ENST00000283290 MACF1Q9UPN3 7388 aaKnown RBP7.53□□□□□ -1.2
ATG3-201ENST00000283290 A6NN06 94 aa7.48□□□□□ -1.21
ATG3-201ENST00000283290 A0A1B0GU33 70 aa7.46□□□□□ -1.21
ATG3-201ENST00000283290 KRTAP9-7A8MTY7 169 aa7.46□□□□□ -1.21
ATG3-201ENST00000283290 KRTAP13-4Q3LI77 160 aa7.46□□□□□ -1.21
ATG3-201ENST00000283290 A6NED7 52 aa7.46□□□□□ -1.22
ATG3-201ENST00000283290 UQCR11O14957 56 aa7.45□□□□□ -1.22
ATG3-201ENST00000283290 SYNE2Q8WXH0 6885 aaKnown RBP7.44□□□□□ -1.22
ATG3-201ENST00000283290 KRTAP10-5P60370 271 aa7.43□□□□□ -1.22
ATG3-201ENST00000283290 PLAC4Q8WY50 150 aa7.38□□□□□ -1.23
ATG3-201ENST00000283290 MIR22HGQ0VDD5 57 aa7.35□□□□□ -1.23
ATG3-201ENST00000283290 SPATA8Q6RVD6 105 aa7.35□□□□□ -1.23
ATG3-201ENST00000283290 CDC42SE1Q9NRR8 79 aa7.33□□□□□ -1.24
ATG3-201ENST00000283290 BRK1Q8WUW1 75 aa7.33□□□□□ -1.24
ATG3-201ENST00000283290 MT1XP80297 61 aa7.31□□□□□ -1.24
ATG3-201ENST00000283290 KRTAP4-8Q9BYQ9 185 aa7.3□□□□□ -1.24
ATG3-201ENST00000283290 A0A0D9SG42 100 aa7.28□□□□□ -1.24
ATG3-201ENST00000283290 A8MU10 97 aa7.28□□□□□ -1.24
ATG3-201ENST00000283290 PRO2289Q9P1D8 64 aa7.2□□□□□ -1.26
ATG3-201ENST00000283290 KRTAP6-3Q3LI67 103 aa7.2□□□□□ -1.26
ATG3-201ENST00000283290 PRO0628Q9UI54 55 aa7.15□□□□□ -1.27
ATG3-201ENST00000283290 SPINT4Q6UDR6 99 aa7.12□□□□□ -1.27
ATG3-201ENST00000283290 KMT2DO14686 5537 aa7.08□□□□□ -1.28
ATG3-201ENST00000283290 KRTAP12-1P59990 96 aa7.08□□□□□ -1.28
ATG3-201ENST00000283290 CAMK2N1Q7Z7J9 78 aa7.08□□□□□ -1.28
ATG3-201ENST00000283290 KRTAP12-2P59991 146 aa7.07□□□□□ -1.28
ATG3-201ENST00000283290 KRTAP10-7P60409 375 aaPredicted RBP7.03□□□□□ -1.28
ATG3-201ENST00000283290 SVIPQ8NHG7 77 aa7.03□□□□□ -1.28
ATG3-201ENST00000283290 MUC12Q9UKN1 5478 aa7.02□□□□□ -1.28
ATG3-201ENST00000283290 K7ERS5 55 aa7.02□□□□□ -1.29
ATG3-201ENST00000283290 KRTAP5-9P26371 169 aa6.97□□□□□ -1.29
ATG3-201ENST00000283290 KRTAP4-8A0A0G2JLE6 195 aa6.96□□□□□ -1.29
ATG3-201ENST00000283290 NEBP20929 6669 aa6.94□□□□□ -1.3
ATG3-201ENST00000283290 PMAIP1Q13794 54 aa6.93□□□□□ -1.3
ATG3-201ENST00000283290 KRTAP10-12P60413 245 aa6.89□□□□□ -1.31
ATG3-201ENST00000283290 KRTAP8-1Q8IUC2 63 aa6.88□□□□□ -1.31
ATG3-201ENST00000283290 MDN1Q9NU22 5596 aa6.87□□□□□ -1.31
ATG3-201ENST00000283290 LCE3BQ5TA77 95 aa6.87□□□□□ -1.31
ATG3-201ENST00000283290 SPRR2FQ96RM1 72 aa6.84□□□□□ -1.31
ATG3-201ENST00000283290 KRTAP9-9Q9BYP9 154 aa6.84□□□□□ -1.31
ATG3-201ENST00000283290 KRTAP9-4Q9BYQ2 154 aa6.84□□□□□ -1.31
ATG3-201ENST00000283290 KRTAP4-12Q9BQ66 201 aa6.82□□□□□ -1.32
ATG3-201ENST00000283290 C10orf95Q9H7T3 257 aa6.76□□□□□ -1.33
ATG3-201ENST00000283290 ROMO1P60602 79 aa6.74□□□□□ -1.33
ATG3-201ENST00000283290 SPRR2EP22531 72 aa6.69□□□□□ -1.34
ATG3-201ENST00000283290 SPRR2BP35325 72 aa6.69□□□□□ -1.34
ATG3-201ENST00000283290 SPRR2AP35326 72 aa6.69□□□□□ -1.34
ATG3-201ENST00000283290 KTN1-AS1Q86SY8 53 aa6.63□□□□□ -1.35
ATG3-201ENST00000283290 LCE1AQ5T7P2 110 aa6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 145.3 ms