RNA–Protein interactions for RNA: ENST00000282878.5

RAB3C-201, Transcript of RAB3C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB3C, Length 8,896 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3C-201ENST00000282878 P0C880 135 aa2.09□□□□□ -2.07
RAB3C-201ENST00000282878 PRO2289Q9P1D8 64 aa2.09□□□□□ -2.07
RAB3C-201ENST00000282878 KRTAP29-1A8MX34 341 aaPredicted RBP2.09□□□□□ -2.07
RAB3C-201ENST00000282878 INE1O15225 51 aa2.09□□□□□ -2.07
RAB3C-201ENST00000282878 FAT3Q8TDW7 4589 aa2.09□□□□□ -2.08
RAB3C-201ENST00000282878 SPRR1BP22528 89 aa2.08□□□□□ -2.08
RAB3C-201ENST00000282878 LCE6AA0A183 80 aa2.08□□□□□ -2.08
RAB3C-201ENST00000282878 KRTAP1-4P0C5Y4 121 aa2.07□□□□□ -2.08
RAB3C-201ENST00000282878 MYCBP2O75592 4640 aa2.07□□□□□ -2.08
RAB3C-201ENST00000282878 STAB2Q8WWQ8 2551 aa2.06□□□□□ -2.08
RAB3C-201ENST00000282878 FAT2Q9NYQ8 4349 aa2.06□□□□□ -2.08
RAB3C-201ENST00000282878 UBR4Q5T4S7 5183 aa2.06□□□□□ -2.08
RAB3C-201ENST00000282878 HERC2O95714 4834 aa2.06□□□□□ -2.08
RAB3C-201ENST00000282878 LRP1Q07954 4544 aaKnown RBP2.06□□□□□ -2.08
RAB3C-201ENST00000282878 PRKDCP78527 4128 aaKnown RBP2.05□□□□□ -2.08
RAB3C-201ENST00000282878 RNF213Q63HN8 5207 aa2.05□□□□□ -2.08
RAB3C-201ENST00000282878 KRTAP4-5Q9BYR2 181 aa2.04□□□□□ -2.08
RAB3C-201ENST00000282878 CMYA5Q8N3K9 4069 aa2.03□□□□□ -2.08
RAB3C-201ENST00000282878 LYSTQ99698 3801 aa2.02□□□□□ -2.09
RAB3C-201ENST00000282878 HMCN2Q8NDA2 5059 aa2.02□□□□□ -2.09
RAB3C-201ENST00000282878 COL7A1Q02388 2944 aa2.02□□□□□ -2.09
RAB3C-201ENST00000282878 TNP1P09430 55 aa2.02□□□□□ -2.09
RAB3C-201ENST00000282878 ANK2Q01484 3957 aa2.02□□□□□ -2.09
RAB3C-201ENST00000282878 A0A1B0GVY2 172 aa2.01□□□□□ -2.09
RAB3C-201ENST00000282878 FAT4Q6V0I7 4981 aa2.01□□□□□ -2.09
RAB3C-201ENST00000282878 KRTAP15-1Q3LI76 137 aa2.01□□□□□ -2.09
RAB3C-201ENST00000282878 HERC1Q15751 4861 aa2□□□□□ -2.09
RAB3C-201ENST00000282878 KRTAP3-1Q9BYR8 98 aa2□□□□□ -2.09
RAB3C-201ENST00000282878 DNAH3Q8TD57 4116 aa1.99□□□□□ -2.09
RAB3C-201ENST00000282878 LCE2DQ5TA82 110 aaPredicted RBP1.98□□□□□ -2.09
RAB3C-201ENST00000282878 KRTAP10-4P60372 401 aaPredicted RBP1.98□□□□□ -2.09
RAB3C-201ENST00000282878 LPAP08519 4548 aa1.97□□□□□ -2.09
RAB3C-201ENST00000282878 TPRXLQ17RH7 258 aa1.97□□□□□ -2.09
RAB3C-201ENST00000282878 KRTAP10-8P60410 259 aa1.97□□□□□ -2.09
RAB3C-201ENST00000282878 DNAH7Q8WXX0 4024 aa1.96□□□□□ -2.1
RAB3C-201ENST00000282878 PKD1P98161 4303 aa1.95□□□□□ -2.1
RAB3C-201ENST00000282878 TGP01266 2768 aa1.95□□□□□ -2.1
RAB3C-201ENST00000282878 KRTAP13-3Q3SY46 172 aa1.95□□□□□ -2.1
RAB3C-201ENST00000282878 C10orf95Q9H7T3 257 aa1.95□□□□□ -2.1
RAB3C-201ENST00000282878 ALMS1Q8TCU4 4167 aa1.94□□□□□ -2.1
RAB3C-201ENST00000282878 DNAH6Q9C0G6 4158 aa1.94□□□□□ -2.1
RAB3C-201ENST00000282878 KMT2AQ03164 3969 aa1.93□□□□□ -2.1
RAB3C-201ENST00000282878 HSPG2P98160 4391 aa1.92□□□□□ -2.1
RAB3C-201ENST00000282878 MUC2Q02817 5179 aa1.92□□□□□ -2.1
RAB3C-201ENST00000282878 LRP2P98164 4655 aa1.92□□□□□ -2.1
RAB3C-201ENST00000282878 MT3P25713 68 aa1.91□□□□□ -2.1
RAB3C-201ENST00000282878 LCE2CQ5TA81 110 aa1.9□□□□□ -2.11
RAB3C-201ENST00000282878 MT1HL1P0DM35 61 aa1.9□□□□□ -2.11
RAB3C-201ENST00000282878 FRAS1Q86XX4 4008 aa1.9□□□□□ -2.11
RAB3C-201ENST00000282878 XP32Q5T750 250 aa1.89□□□□□ -2.11
RAB3C-201ENST00000282878 PKHD1L1Q86WI1 4243 aa1.86□□□□□ -2.11
RAB3C-201ENST00000282878 KRTAP4-1Q9BYQ7 146 aa1.86□□□□□ -2.11
RAB3C-201ENST00000282878 KRTAP10-10P60014 251 aa1.85□□□□□ -2.11
RAB3C-201ENST00000282878 PKHD1P08F94 4074 aa1.85□□□□□ -2.11
RAB3C-201ENST00000282878 KRTAP13-4Q3LI77 160 aa1.85□□□□□ -2.11
RAB3C-201ENST00000282878 H0YAA0 97 aa1.84□□□□□ -2.11
RAB3C-201ENST00000282878 LORP23490 312 aaPredicted RBP1.84□□□□□ -2.12
RAB3C-201ENST00000282878 LCE2BO14633 110 aa1.84□□□□□ -2.12
RAB3C-201ENST00000282878 LCE2AQ5TA79 106 aaPredicted RBP1.82□□□□□ -2.12
RAB3C-201ENST00000282878 KRTAP12-2P59991 146 aa1.8□□□□□ -2.12
RAB3C-201ENST00000282878 USH2AO75445 5202 aa1.8□□□□□ -2.12
RAB3C-201ENST00000282878 KRTAP10-6P60371 365 aaPredicted RBP1.78□□□□□ -2.12
RAB3C-201ENST00000282878 VPS13BQ7Z7G8 4022 aa1.78□□□□□ -2.12
RAB3C-201ENST00000282878 FSIP2Q5CZC0 6907 aa1.78□□□□□ -2.13
RAB3C-201ENST00000282878 HECTD4Q9Y4D8 3996 aa1.75□□□□□ -2.13
RAB3C-201ENST00000282878 TNXBP22105 4242 aa1.75□□□□□ -2.13
RAB3C-201ENST00000282878 MUC17Q685J3 4493 aa1.73□□□□□ -2.13
RAB3C-201ENST00000282878 KRTAP12-1P59990 96 aa1.68□□□□□ -2.14
RAB3C-201ENST00000282878 SSPOA2VEC9 5147 aa1.66□□□□□ -2.14
RAB3C-201ENST00000282878 KRTAP19-2Q3LHN2 52 aa1.65□□□□□ -2.14
RAB3C-201ENST00000282878 MT1HP80294 61 aa1.62□□□□□ -2.15
RAB3C-201ENST00000282878 MT1FP04733 61 aa1.62□□□□□ -2.15
RAB3C-201ENST00000282878 MT2AP02795 61 aa1.59□□□□□ -2.15
RAB3C-201ENST00000282878 KMT2DO14686 5537 aa1.58□□□□□ -2.16
RAB3C-201ENST00000282878 KRTAP10-12P60413 245 aa1.58□□□□□ -2.16
RAB3C-201ENST00000282878 CRCT1Q9UGL9 99 aa1.58□□□□□ -2.16
RAB3C-201ENST00000282878 OBSCNQ5VST9 7968 aa1.55□□□□□ -2.16
RAB3C-201ENST00000282878 KRTAP19-1Q8IUB9 90 aa1.54□□□□□ -2.16
RAB3C-201ENST00000282878 LCE3AQ5TA76 89 aa1.53□□□□□ -2.16
RAB3C-201ENST00000282878 KRTAP9-8Q9BYQ0 159 aa1.53□□□□□ -2.16
RAB3C-201ENST00000282878 KRTAP4-8A0A0G2JLE6 195 aa1.51□□□□□ -2.17
RAB3C-201ENST00000282878 MT1BP07438 61 aa1.51□□□□□ -2.17
RAB3C-201ENST00000282878 KRTAP4-8Q9BYQ9 185 aa1.51□□□□□ -2.17
RAB3C-201ENST00000282878 KRTAP12-3P60328 96 aa1.5□□□□□ -2.17
RAB3C-201ENST00000282878 KRTAP10-7P60409 375 aaPredicted RBP1.5□□□□□ -2.17
RAB3C-201ENST00000282878 SYNE2Q8WXH0 6885 aaKnown RBP1.49□□□□□ -2.17
RAB3C-201ENST00000282878 KRTAP8-1Q8IUC2 63 aa1.49□□□□□ -2.17
RAB3C-201ENST00000282878 HMCN1Q96RW7 5635 aa1.49□□□□□ -2.17
RAB3C-201ENST00000282878 KRTAP10-5P60370 271 aa1.48□□□□□ -2.17
RAB3C-201ENST00000282878 KRTAP4-7Q9BYR0 210 aa1.47□□□□□ -2.17
RAB3C-201ENST00000282878 MACF1Q9UPN3 7388 aaKnown RBP1.47□□□□□ -2.17
RAB3C-201ENST00000282878 KRTAP9-3Q9BYQ3 159 aa1.47□□□□□ -2.17
RAB3C-201ENST00000282878 FCGBPQ9Y6R7 5405 aaPredicted RBP1.46□□□□□ -2.18
RAB3C-201ENST00000282878 MUC12Q9UKN1 5478 aa1.46□□□□□ -2.18
RAB3C-201ENST00000282878 MT1XP80297 61 aa1.46□□□□□ -2.18
RAB3C-201ENST00000282878 DSTQ03001 7570 aaKnown RBP1.45□□□□□ -2.18
RAB3C-201ENST00000282878 MUC5BQ9HC84 5762 aaPredicted RBP1.44□□□□□ -2.18
RAB3C-201ENST00000282878 SPRR2GQ9BYE4 73 aa1.44□□□□□ -2.18
RAB3C-201ENST00000282878 LCE5AQ5TCM9 118 aa1.42□□□□□ -2.18
RAB3C-201ENST00000282878 KRTAP19-8Q3LI54 63 aa1.42□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms