RNA–Protein interactions for RNA: ENST00000278833.3

ROM1-201, Transcript of retinal outer segment membrane protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene ROM1, Length 1,878 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ROM1-201ENST00000278833 DMBT1Q9UGM3 2413 aaPredicted RBP13.32□□□□□ -0.28
ROM1-201ENST00000278833 KRTAP10-8P60410 259 aa13.31□□□□□ -0.28
ROM1-201ENST00000278833 TNXBP22105 4242 aa13.29□□□□□ -0.28
ROM1-201ENST00000278833 J3QL48 77 aa13.25□□□□□ -0.29
ROM1-201ENST00000278833 MT1HL1P0DM35 61 aa13.25□□□□□ -0.29
ROM1-201ENST00000278833 COX6B2Q6YFQ2 88 aa13.24□□□□□ -0.29
ROM1-201ENST00000278833 RBM12B-AS1Q9P1G2 102 aa13.16□□□□□ -0.3
ROM1-201ENST00000278833 HERC1Q15751 4861 aa13.16□□□□□ -0.3
ROM1-201ENST00000278833 RPL37P61927 97 aaKnown RBP13.11□□□□□ -0.31
ROM1-201ENST00000278833 H0YAA0 97 aa13.04□□□□□ -0.32
ROM1-201ENST00000278833 H1FX-AS1Q4G0G2 97 aa13.02□□□□□ -0.32
ROM1-201ENST00000278833 A0A1B0GU33 70 aa13.02□□□□□ -0.33
ROM1-201ENST00000278833 XP32Q5T750 250 aa12.99□□□□□ -0.33
ROM1-201ENST00000278833 PRAC1Q96KF2 57 aa12.88□□□□□ -0.35
ROM1-201ENST00000278833 ADM2Q7Z4H4 148 aa12.86□□□□□ -0.35
ROM1-201ENST00000278833 KRTAP3-3Q9BYR6 98 aa12.84□□□□□ -0.35
ROM1-201ENST00000278833 HMCN2Q8NDA2 5059 aa12.76□□□□□ -0.37
ROM1-201ENST00000278833 S4R3F8 94 aa12.73□□□□□ -0.37
ROM1-201ENST00000278833 KRTAP10-6P60371 365 aaPredicted RBP12.7□□□□□ -0.38
ROM1-201ENST00000278833 TPRXLQ17RH7 258 aa12.65□□□□□ -0.38
ROM1-201ENST00000278833 KRTAP3-2Q9BYR7 98 aa12.63□□□□□ -0.39
ROM1-201ENST00000278833 K7ERS5 55 aa12.61□□□□□ -0.39
ROM1-201ENST00000278833 CSAG1Q6PB30 78 aa12.59□□□□□ -0.39
ROM1-201ENST00000278833 LPAP08519 4548 aa12.58□□□□□ -0.4
ROM1-201ENST00000278833 LINC01554Q52M75 96 aa12.57□□□□□ -0.4
ROM1-201ENST00000278833 LRP2P98164 4655 aa12.56□□□□□ -0.4
ROM1-201ENST00000278833 KRTAP13-4Q3LI77 160 aa12.46□□□□□ -0.41
ROM1-201ENST00000278833 KRTAP25-1Q3LHN0 102 aa12.4□□□□□ -0.42
ROM1-201ENST00000278833 UBR4Q5T4S7 5183 aa12.38□□□□□ -0.43
ROM1-201ENST00000278833 P0C880 135 aa12.36□□□□□ -0.43
ROM1-201ENST00000278833 ROMO1P60602 79 aa12.3□□□□□ -0.44
ROM1-201ENST00000278833 A0A0D9SG42 100 aa12.21□□□□□ -0.45
ROM1-201ENST00000278833 M0QZ58 72 aa12.17□□□□□ -0.46
ROM1-201ENST00000278833 SEC61BP60468 96 aaKnown RBP12.14□□□□□ -0.47
ROM1-201ENST00000278833 RNF213Q63HN8 5207 aa12.11□□□□□ -0.47
ROM1-201ENST00000278833 H3BS24 57 aa12.08□□□□□ -0.48
ROM1-201ENST00000278833 KRTAP12-1P59990 96 aa12.06□□□□□ -0.48
ROM1-201ENST00000278833 MUC2Q02817 5179 aa12.06□□□□□ -0.48
ROM1-201ENST00000278833 KRTAP12-2P59991 146 aa12.05□□□□□ -0.48
ROM1-201ENST00000278833 MUC17Q685J3 4493 aa12.04□□□□□ -0.48
ROM1-201ENST00000278833 CRIPTQ9P021 101 aa11.92□□□□□ -0.5
ROM1-201ENST00000278833 SPINT4Q6UDR6 99 aa11.86□□□□□ -0.51
ROM1-201ENST00000278833 KRTAP4-1Q9BYQ7 146 aa11.84□□□□□ -0.51
ROM1-201ENST00000278833 KRTAP19-2Q3LHN2 52 aa11.79□□□□□ -0.52
ROM1-201ENST00000278833 R4GN34 69 aa11.74□□□□□ -0.53
ROM1-201ENST00000278833 C10orf95Q9H7T3 257 aa11.65□□□□□ -0.54
ROM1-201ENST00000278833 FAT4Q6V0I7 4981 aa11.58□□□□□ -0.56
ROM1-201ENST00000278833 LORP23490 312 aaPredicted RBP11.55□□□□□ -0.56
ROM1-201ENST00000278833 LCE2CQ5TA81 110 aa11.4□□□□□ -0.58
ROM1-201ENST00000278833 FLGP20930 4061 aaPredicted RBP11.37□□□□□ -0.59
ROM1-201ENST00000278833 LCE2AQ5TA79 106 aaPredicted RBP11.33□□□□□ -0.6
ROM1-201ENST00000278833 KRTAP15-1Q3LI76 137 aa11.28□□□□□ -0.6
ROM1-201ENST00000278833 MT1HP80294 61 aa11.21□□□□□ -0.61
ROM1-201ENST00000278833 CAMK2N1Q7Z7J9 78 aa11.09□□□□□ -0.63
ROM1-201ENST00000278833 PP632Q6XCG6 107 aa11.08□□□□□ -0.64
ROM1-201ENST00000278833 M0R2T5 61 aa11.04□□□□□ -0.64
ROM1-201ENST00000278833 SPRR2GQ9BYE4 73 aa10.88□□□□□ -0.67
ROM1-201ENST00000278833 KRTAP23-1A1A580 65 aa10.87□□□□□ -0.67
ROM1-201ENST00000278833 PLAC4Q8WY50 150 aa10.81□□□□□ -0.68
ROM1-201ENST00000278833 TNP1P09430 55 aa10.77□□□□□ -0.69
ROM1-201ENST00000278833 NDUFAF8A1L188 74 aa10.76□□□□□ -0.69
ROM1-201ENST00000278833 KRTAP19-1Q8IUB9 90 aa10.74□□□□□ -0.69
ROM1-201ENST00000278833 KRTAP9-8Q9BYQ0 159 aa10.7□□□□□ -0.7
ROM1-201ENST00000278833 MT2AP02795 61 aa10.59□□□□□ -0.71
ROM1-201ENST00000278833 KRTAP9-2Q9BYQ4 174 aa10.57□□□□□ -0.72
ROM1-201ENST00000278833 LCE2DQ5TA82 110 aaPredicted RBP10.53□□□□□ -0.72
ROM1-201ENST00000278833 MT1FP04733 61 aa10.52□□□□□ -0.73
ROM1-201ENST00000278833 KRTAP10-10P60014 251 aa10.47□□□□□ -0.73
ROM1-201ENST00000278833 KRTAP19-8Q3LI54 63 aa10.46□□□□□ -0.74
ROM1-201ENST00000278833 A0A0A0MQY5 61 aa10.42□□□□□ -0.74
ROM1-201ENST00000278833 FSIP2Q5CZC0 6907 aa10.34□□□□□ -0.75
ROM1-201ENST00000278833 KRTAP9-3Q9BYQ3 159 aa10.34□□□□□ -0.75
ROM1-201ENST00000278833 SPRR5A0A1B0GTR4 108 aa10.3□□□□□ -0.76
ROM1-201ENST00000278833 LUZP6Q538Z0 58 aa10.27□□□□□ -0.77
ROM1-201ENST00000278833 MT1BP07438 61 aa10.21□□□□□ -0.77
ROM1-201ENST00000278833 LCE2BO14633 110 aa10.19□□□□□ -0.78
ROM1-201ENST00000278833 LCE3AQ5TA76 89 aa10.15□□□□□ -0.78
ROM1-201ENST00000278833 USH2AO75445 5202 aa10.15□□□□□ -0.78
ROM1-201ENST00000278833 KRTAP10-5P60370 271 aa10.1□□□□□ -0.79
ROM1-201ENST00000278833 MT1XP80297 61 aa10.1□□□□□ -0.79
ROM1-201ENST00000278833 KRTAP8-1Q8IUC2 63 aa10.07□□□□□ -0.8
ROM1-201ENST00000278833 CRCT1Q9UGL9 99 aa10.06□□□□□ -0.8
ROM1-201ENST00000278833 KRTAP9-6A0A140TA67 174 aa10.02□□□□□ -0.8
ROM1-201ENST00000278833 SSPOA2VEC9 5147 aa9.96□□□□□ -0.81
ROM1-201ENST00000278833 KRTAP10-12P60413 245 aa9.86□□□□□ -0.83
ROM1-201ENST00000278833 PRO2289Q9P1D8 64 aa9.81□□□□□ -0.84
ROM1-201ENST00000278833 KRTAP12-3P60328 96 aa9.72□□□□□ -0.85
ROM1-201ENST00000278833 KRTAP19-6Q3LI70 58 aa9.72□□□□□ -0.85
ROM1-201ENST00000278833 KRTAP10-7P60409 375 aaPredicted RBP9.71□□□□□ -0.85
ROM1-201ENST00000278833 FCGBPQ9Y6R7 5405 aaPredicted RBP9.68□□□□□ -0.86
ROM1-201ENST00000278833 MACF1Q9UPN3 7388 aaKnown RBP9.35□□□□□ -0.91
ROM1-201ENST00000278833 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.35□□□□□ -0.91
ROM1-201ENST00000278833 KRTAP19-5Q3LI72 72 aa9.31□□□□□ -0.92
ROM1-201ENST00000278833 SYNE2Q8WXH0 6885 aaKnown RBP9.19□□□□□ -0.94
ROM1-201ENST00000278833 LCE3CQ5T5A8 94 aa9.17□□□□□ -0.94
ROM1-201ENST00000278833 KRTAP9-7A8MTY7 169 aa9.08□□□□□ -0.96
ROM1-201ENST00000278833 KRTAP19-4Q3LI73 84 aa9.07□□□□□ -0.96
ROM1-201ENST00000278833 KRTAP4-8A0A0G2JLE6 195 aa9.04□□□□□ -0.96
ROM1-201ENST00000278833 KRTAP4-8Q9BYQ9 185 aa9.04□□□□□ -0.96
ROM1-201ENST00000278833 KRTAP19-7Q3SYF9 63 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms