RNA–Protein interactions for RNA: ENST00000278412.6

SSRP1-201, Transcript of structure specific recognition protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSRP1, Length 2,819 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1-201ENST00000278412 XP32Q5T750 250 aa6.29□□□□□ -1.4
SSRP1-201ENST00000278412 TP53AIP1Q9HCN2 124 aa6.28□□□□□ -1.4
SSRP1-201ENST00000278412 HMCN2Q8NDA2 5059 aa6.27□□□□□ -1.41
SSRP1-201ENST00000278412 HRES1P13985 223 aa6.27□□□□□ -1.41
SSRP1-201ENST00000278412 MUC2Q02817 5179 aa6.27□□□□□ -1.41
SSRP1-201ENST00000278412 C20orf166-AS1Q96NR2 134 aa6.27□□□□□ -1.41
SSRP1-201ENST00000278412 A8MUU9 505 aa6.26□□□□□ -1.41
SSRP1-201ENST00000278412 IGKV2D-30A0A075B6S6 120 aa6.26□□□□□ -1.41
SSRP1-201ENST00000278412 IGKV2-30P06310 120 aa6.26□□□□□ -1.41
SSRP1-201ENST00000278412 RPL37P61927 97 aaKnown RBP6.17□□□□□ -1.42
SSRP1-201ENST00000278412 SPATA8Q6RVD6 105 aa6.17□□□□□ -1.42
SSRP1-201ENST00000278412 UBR4Q5T4S7 5183 aa6.17□□□□□ -1.42
SSRP1-201ENST00000278412 TPRXLQ17RH7 258 aa6.17□□□□□ -1.42
SSRP1-201ENST00000278412 RNF213Q63HN8 5207 aa6.13□□□□□ -1.43
SSRP1-201ENST00000278412 CSAG1Q6PB30 78 aa6.12□□□□□ -1.43
SSRP1-201ENST00000278412 KRTAP4-1Q9BYQ7 146 aa6.09□□□□□ -1.43
SSRP1-201ENST00000278412 ACYP2P14621 99 aa6.08□□□□□ -1.44
SSRP1-201ENST00000278412 A0A1B0GU69 56 aa6.07□□□□□ -1.44
SSRP1-201ENST00000278412 MIR22HGQ0VDD5 57 aa6.07□□□□□ -1.44
SSRP1-201ENST00000278412 MUC17Q685J3 4493 aa6.07□□□□□ -1.44
SSRP1-201ENST00000278412 KRTAP3-1Q9BYR8 98 aa6.05□□□□□ -1.44
SSRP1-201ENST00000278412 UQCR11O14957 56 aa6.04□□□□□ -1.44
SSRP1-201ENST00000278412 DMAC1Q96GE9 116 aa6.02□□□□□ -1.45
SSRP1-201ENST00000278412 FAT4Q6V0I7 4981 aa6□□□□□ -1.45
SSRP1-201ENST00000278412 ROMO1P60602 79 aa5.96□□□□□ -1.46
SSRP1-201ENST00000278412 KRTAP25-1Q3LHN0 102 aa5.92□□□□□ -1.46
SSRP1-201ENST00000278412 SEC61BP60468 96 aaKnown RBP5.92□□□□□ -1.46
SSRP1-201ENST00000278412 COX6B2Q6YFQ2 88 aa5.91□□□□□ -1.46
SSRP1-201ENST00000278412 KRTAP19-2Q3LHN2 52 aa5.84□□□□□ -1.47
SSRP1-201ENST00000278412 KRTAP3-3Q9BYR6 98 aa5.82□□□□□ -1.48
SSRP1-201ENST00000278412 P0C880 135 aa5.8□□□□□ -1.48
SSRP1-201ENST00000278412 FLGP20930 4061 aaPredicted RBP5.78□□□□□ -1.48
SSRP1-201ENST00000278412 H1FX-AS1Q4G0G2 97 aa5.76□□□□□ -1.49
SSRP1-201ENST00000278412 S4R3F8 94 aa5.74□□□□□ -1.49
SSRP1-201ENST00000278412 H0YAA0 97 aa5.74□□□□□ -1.49
SSRP1-201ENST00000278412 LCE2CQ5TA81 110 aa5.72□□□□□ -1.49
SSRP1-201ENST00000278412 A0A0A0MQY5 61 aa5.63□□□□□ -1.51
SSRP1-201ENST00000278412 A0A1B0GU33 70 aa5.61□□□□□ -1.51
SSRP1-201ENST00000278412 KRTAP3-2Q9BYR7 98 aa5.6□□□□□ -1.51
SSRP1-201ENST00000278412 CRIPTQ9P021 101 aa5.6□□□□□ -1.51
SSRP1-201ENST00000278412 KRTAP10-6P60371 365 aaPredicted RBP5.58□□□□□ -1.52
SSRP1-201ENST00000278412 MT1HP80294 61 aa5.57□□□□□ -1.52
SSRP1-201ENST00000278412 K7ERS5 55 aa5.56□□□□□ -1.52
SSRP1-201ENST00000278412 SPINT4Q6UDR6 99 aa5.55□□□□□ -1.52
SSRP1-201ENST00000278412 NDUFAF8A1L188 74 aa5.54□□□□□ -1.52
SSRP1-201ENST00000278412 LORP23490 312 aaPredicted RBP5.54□□□□□ -1.52
SSRP1-201ENST00000278412 KRTAP15-1Q3LI76 137 aa5.54□□□□□ -1.52
SSRP1-201ENST00000278412 KRTAP13-4Q3LI77 160 aa5.51□□□□□ -1.53
SSRP1-201ENST00000278412 M0R2T5 61 aa5.5□□□□□ -1.53
SSRP1-201ENST00000278412 A0A0D9SG42 100 aa5.4□□□□□ -1.55
SSRP1-201ENST00000278412 KRTAP9-8Q9BYQ0 159 aa5.37□□□□□ -1.55
SSRP1-201ENST00000278412 MT1FP04733 61 aa5.37□□□□□ -1.55
SSRP1-201ENST00000278412 MT2AP02795 61 aa5.36□□□□□ -1.55
SSRP1-201ENST00000278412 C10orf95Q9H7T3 257 aa5.35□□□□□ -1.55
SSRP1-201ENST00000278412 M0QZ58 72 aa5.33□□□□□ -1.56
SSRP1-201ENST00000278412 LCE2AQ5TA79 106 aaPredicted RBP5.33□□□□□ -1.56
SSRP1-201ENST00000278412 R4GN34 69 aa5.3□□□□□ -1.56
SSRP1-201ENST00000278412 KRTAP10-10P60014 251 aa5.29□□□□□ -1.56
SSRP1-201ENST00000278412 USH2AO75445 5202 aa5.27□□□□□ -1.57
SSRP1-201ENST00000278412 LUZP6Q538Z0 58 aa5.25□□□□□ -1.57
SSRP1-201ENST00000278412 KRTAP12-2P59991 146 aa5.25□□□□□ -1.57
SSRP1-201ENST00000278412 KRTAP19-1Q8IUB9 90 aa5.24□□□□□ -1.57
SSRP1-201ENST00000278412 FSIP2Q5CZC0 6907 aa5.22□□□□□ -1.57
SSRP1-201ENST00000278412 KRTAP12-1P59990 96 aa5.2□□□□□ -1.58
SSRP1-201ENST00000278412 KRTAP9-3Q9BYQ3 159 aa5.16□□□□□ -1.58
SSRP1-201ENST00000278412 SPRR2GQ9BYE4 73 aa5.14□□□□□ -1.59
SSRP1-201ENST00000278412 LCE2BO14633 110 aa5.1□□□□□ -1.59
SSRP1-201ENST00000278412 MT1BP07438 61 aa5.05□□□□□ -1.6
SSRP1-201ENST00000278412 PLAC4Q8WY50 150 aa5.01□□□□□ -1.61
SSRP1-201ENST00000278412 SSPOA2VEC9 5147 aa4.99□□□□□ -1.61
SSRP1-201ENST00000278412 KRTAP19-8Q3LI54 63 aa4.99□□□□□ -1.61
SSRP1-201ENST00000278412 CAMK2N1Q7Z7J9 78 aa4.97□□□□□ -1.61
SSRP1-201ENST00000278412 MT1XP80297 61 aa4.88□□□□□ -1.63
SSRP1-201ENST00000278412 KMT2DO14686 5537 aa4.87□□□□□ -1.63
SSRP1-201ENST00000278412 KRTAP10-5P60370 271 aa4.87□□□□□ -1.63
SSRP1-201ENST00000278412 LCE2DQ5TA82 110 aaPredicted RBP4.79□□□□□ -1.64
SSRP1-201ENST00000278412 PP632Q6XCG6 107 aa4.75□□□□□ -1.65
SSRP1-201ENST00000278412 KRTAP10-7P60409 375 aaPredicted RBP4.75□□□□□ -1.65
SSRP1-201ENST00000278412 FCGBPQ9Y6R7 5405 aaPredicted RBP4.74□□□□□ -1.65
SSRP1-201ENST00000278412 KRTAP9-2Q9BYQ4 174 aa4.7□□□□□ -1.66
SSRP1-201ENST00000278412 TNP1P09430 55 aa4.66□□□□□ -1.66
SSRP1-201ENST00000278412 SPRR5A0A1B0GTR4 108 aa4.66□□□□□ -1.66
SSRP1-201ENST00000278412 PRO2289Q9P1D8 64 aa4.65□□□□□ -1.66
SSRP1-201ENST00000278412 KRTAP4-8A0A0G2JLE6 195 aa4.64□□□□□ -1.67
SSRP1-201ENST00000278412 KRTAP4-8Q9BYQ9 185 aa4.64□□□□□ -1.67
SSRP1-201ENST00000278412 KRTAP19-6Q3LI70 58 aa4.63□□□□□ -1.67
SSRP1-201ENST00000278412 LCE3AQ5TA76 89 aa4.62□□□□□ -1.67
SSRP1-201ENST00000278412 MACF1Q9UPN3 7388 aaKnown RBP4.59□□□□□ -1.67
SSRP1-201ENST00000278412 KRTAP10-12P60413 245 aa4.56□□□□□ -1.68
SSRP1-201ENST00000278412 SYNE2Q8WXH0 6885 aaKnown RBP4.55□□□□□ -1.68
SSRP1-201ENST00000278412 KRTAP23-1A1A580 65 aa4.53□□□□□ -1.68
SSRP1-201ENST00000278412 INE1O15225 51 aa4.49□□□□□ -1.69
SSRP1-201ENST00000278412 CRCT1Q9UGL9 99 aa4.49□□□□□ -1.69
SSRP1-201ENST00000278412 MUC12Q9UKN1 5478 aa4.47□□□□□ -1.69
SSRP1-201ENST00000278412 KRTAP19-5Q3LI72 72 aa4.42□□□□□ -1.7
SSRP1-201ENST00000278412 KRTAP8-1Q8IUC2 63 aa4.4□□□□□ -1.71
SSRP1-201ENST00000278412 KRTAP12-3P60328 96 aa4.37□□□□□ -1.71
SSRP1-201ENST00000278412 KRTAP19-7Q3SYF9 63 aa4.36□□□□□ -1.71
SSRP1-201ENST00000278412 MDN1Q9NU22 5596 aa4.29□□□□□ -1.72
SSRP1-201ENST00000278412 KRTAP9-6A0A140TA67 174 aa4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 79.1 ms