RNA–Protein interactions for RNA: ENST00000277817.10

HERC4-201, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best) BASIC

Gene HERC4, Length 4,371 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-201ENST00000277817 FP248Q71RG6 208 aaPredicted RBP1.73□□□□□ -2.13
HERC4-201ENST00000277817 KRTAP1-5Q9BYS1 174 aa1.73□□□□□ -2.13
HERC4-201ENST00000277817 C9orf92A6NGG3 77 aa1.73□□□□□ -2.13
HERC4-201ENST00000277817 A8MUU9 505 aa1.73□□□□□ -2.13
HERC4-201ENST00000277817 HMCN2Q8NDA2 5059 aa1.72□□□□□ -2.13
HERC4-201ENST00000277817 KRTAP2-2Q9BYT5 123 aa1.72□□□□□ -2.13
HERC4-201ENST00000277817 CYP4F30PQ9H0H9 118 aa1.72□□□□□ -2.13
HERC4-201ENST00000277817 SRRM2Q9UQ35 2752 aaKnown RBP1.72□□□□□ -2.13
HERC4-201ENST00000277817 IGLV7-46A0A075B6I9 117 aa1.71□□□□□ -2.14
HERC4-201ENST00000277817 FAM229BQ4G0N7 80 aa1.71□□□□□ -2.14
HERC4-201ENST00000277817 LINC00304Q8N9R0 145 aa1.71□□□□□ -2.14
HERC4-201ENST00000277817 LCA10Q71F78 164 aa1.71□□□□□ -2.14
HERC4-201ENST00000277817 UQCR11O14957 56 aa1.7□□□□□ -2.14
HERC4-201ENST00000277817 LINC00472Q9H8W2 130 aa1.7□□□□□ -2.14
HERC4-201ENST00000277817 Q1T7F1 81 aa1.7□□□□□ -2.14
HERC4-201ENST00000277817 MMP24-AS1A0A0U1RRL7 71 aa1.69□□□□□ -2.14
HERC4-201ENST00000277817 MIR22HGQ0VDD5 57 aa1.69□□□□□ -2.14
HERC4-201ENST00000277817 LCE6AA0A183 80 aa1.69□□□□□ -2.14
HERC4-201ENST00000277817 TENM1Q9UKZ4 2725 aa1.69□□□□□ -2.14
HERC4-201ENST00000277817 HERC1Q15751 4861 aa1.69□□□□□ -2.14
HERC4-201ENST00000277817 FLGP20930 4061 aaPredicted RBP1.69□□□□□ -2.14
HERC4-201ENST00000277817 HRES1P13985 223 aa1.68□□□□□ -2.14
HERC4-201ENST00000277817 SPRR1BP22528 89 aa1.68□□□□□ -2.14
HERC4-201ENST00000277817 PLAC8Q9NZF1 115 aa1.68□□□□□ -2.14
HERC4-201ENST00000277817 LINC01554Q52M75 96 aa1.68□□□□□ -2.14
HERC4-201ENST00000277817 VWFP04275 2813 aa1.68□□□□□ -2.14
HERC4-201ENST00000277817 A6NN06 94 aa1.67□□□□□ -2.14
HERC4-201ENST00000277817 LUZP6Q538Z0 58 aa1.67□□□□□ -2.14
HERC4-201ENST00000277817 LRP2P98164 4655 aa1.67□□□□□ -2.14
HERC4-201ENST00000277817 KRTAP11-1Q8IUC1 163 aa1.67□□□□□ -2.14
HERC4-201ENST00000277817 CDC42SE1Q9NRR8 79 aa1.67□□□□□ -2.14
HERC4-201ENST00000277817 LRP1Q07954 4544 aaKnown RBP1.66□□□□□ -2.14
HERC4-201ENST00000277817 A0A0D9SG42 100 aa1.65□□□□□ -2.14
HERC4-201ENST00000277817 KRTAP29-1A8MX34 341 aaPredicted RBP1.65□□□□□ -2.15
HERC4-201ENST00000277817 P0C880 135 aa1.65□□□□□ -2.15
HERC4-201ENST00000277817 KRTAP10-1P60331 282 aa1.65□□□□□ -2.15
HERC4-201ENST00000277817 Q5VV11 94 aa1.65□□□□□ -2.15
HERC4-201ENST00000277817 LINC01558Q9Y6Z2 57 aa1.65□□□□□ -2.15
HERC4-201ENST00000277817 SPINK7P58062 85 aa1.64□□□□□ -2.15
HERC4-201ENST00000277817 ZCCHC13Q8WW36 166 aaKnown RBP1.64□□□□□ -2.15
HERC4-201ENST00000277817 A0A1B0GU33 70 aa1.64□□□□□ -2.15
HERC4-201ENST00000277817 SPINT4Q6UDR6 99 aa1.64□□□□□ -2.15
HERC4-201ENST00000277817 LINC00483Q53H64 154 aa1.64□□□□□ -2.15
HERC4-201ENST00000277817 LCE1FQ5T754 118 aa1.64□□□□□ -2.15
HERC4-201ENST00000277817 TGP01266 2768 aa1.63□□□□□ -2.15
HERC4-201ENST00000277817 COX6B2Q6YFQ2 88 aa1.63□□□□□ -2.15
HERC4-201ENST00000277817 Q6ZRN7 208 aaPredicted RBP1.63□□□□□ -2.15
HERC4-201ENST00000277817 CRIPTQ9P021 101 aa1.63□□□□□ -2.15
HERC4-201ENST00000277817 KRTAP10-4P60372 401 aaPredicted RBP1.62□□□□□ -2.15
HERC4-201ENST00000277817 FAT4Q6V0I7 4981 aa1.61□□□□□ -2.15
HERC4-201ENST00000277817 KRTAP1-4P0C5Y4 121 aa1.61□□□□□ -2.15
HERC4-201ENST00000277817 ASB16-AS1Q495Z4 193 aa1.61□□□□□ -2.15
HERC4-201ENST00000277817 Q6ZSA8 131 aa1.61□□□□□ -2.15
HERC4-201ENST00000277817 KRTAP13-1Q8IUC0 172 aa1.6□□□□□ -2.15
HERC4-201ENST00000277817 DMAC1Q96GE9 116 aa1.6□□□□□ -2.15
HERC4-201ENST00000277817 A8MU10 97 aa1.59□□□□□ -2.16
HERC4-201ENST00000277817 KRTAP13-2Q52LG2 175 aa1.59□□□□□ -2.16
HERC4-201ENST00000277817 CSAG1Q6PB30 78 aa1.59□□□□□ -2.16
HERC4-201ENST00000277817 ROMO1P60602 79 aa1.58□□□□□ -2.16
HERC4-201ENST00000277817 Q5VSD8 79 aa1.58□□□□□ -2.16
HERC4-201ENST00000277817 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.58□□□□□ -2.16
HERC4-201ENST00000277817 SPATA8Q6RVD6 105 aa1.58□□□□□ -2.16
HERC4-201ENST00000277817 S4R3F8 94 aa1.58□□□□□ -2.16
HERC4-201ENST00000277817 NDUFAF8A1L188 74 aa1.56□□□□□ -2.16
HERC4-201ENST00000277817 H1FX-AS1Q4G0G2 97 aa1.56□□□□□ -2.16
HERC4-201ENST00000277817 M0R2T5 61 aa1.55□□□□□ -2.16
HERC4-201ENST00000277817 RPL37P61927 97 aaKnown RBP1.55□□□□□ -2.16
HERC4-201ENST00000277817 KRTAP10-8P60410 259 aa1.55□□□□□ -2.16
HERC4-201ENST00000277817 R4GN34 69 aa1.55□□□□□ -2.16
HERC4-201ENST00000277817 M0QZ58 72 aa1.53□□□□□ -2.16
HERC4-201ENST00000277817 RPS29P62273 56 aaKnown RBP1.53□□□□□ -2.16
HERC4-201ENST00000277817 C20orf166-AS1Q96NR2 134 aa1.53□□□□□ -2.16
HERC4-201ENST00000277817 UBR4Q5T4S7 5183 aa1.52□□□□□ -2.17
HERC4-201ENST00000277817 PRO2289Q9P1D8 64 aa1.52□□□□□ -2.17
HERC4-201ENST00000277817 GPR98Q8WXG9 6306 aa1.5□□□□□ -2.17
HERC4-201ENST00000277817 KRTAP25-1Q3LHN0 102 aa1.49□□□□□ -2.17
HERC4-201ENST00000277817 TPRXLQ17RH7 258 aa1.48□□□□□ -2.17
HERC4-201ENST00000277817 SSPOA2VEC9 5147 aa1.48□□□□□ -2.17
HERC4-201ENST00000277817 KRTAP13-3Q3SY46 172 aa1.47□□□□□ -2.17
HERC4-201ENST00000277817 H0YAA0 97 aa1.46□□□□□ -2.18
HERC4-201ENST00000277817 MT1HL1P0DM35 61 aa1.46□□□□□ -2.18
HERC4-201ENST00000277817 LPAP08519 4548 aa1.45□□□□□ -2.18
HERC4-201ENST00000277817 SPRR5A0A1B0GTR4 108 aa1.45□□□□□ -2.18
HERC4-201ENST00000277817 PLAC4Q8WY50 150 aa1.45□□□□□ -2.18
HERC4-201ENST00000277817 RNF213Q63HN8 5207 aa1.44□□□□□ -2.18
HERC4-201ENST00000277817 C10orf95Q9H7T3 257 aa1.44□□□□□ -2.18
HERC4-201ENST00000277817 MT3P25713 68 aa1.44□□□□□ -2.18
HERC4-201ENST00000277817 KRTAP19-2Q3LHN2 52 aa1.43□□□□□ -2.18
HERC4-201ENST00000277817 KRTAP10-6P60371 365 aaPredicted RBP1.42□□□□□ -2.18
HERC4-201ENST00000277817 HMCN1Q96RW7 5635 aa1.41□□□□□ -2.18
HERC4-201ENST00000277817 KRTAP10-12P60413 245 aa1.4□□□□□ -2.19
HERC4-201ENST00000277817 TNP1P09430 55 aa1.39□□□□□ -2.19
HERC4-201ENST00000277817 LCE3CQ5T5A8 94 aa1.38□□□□□ -2.19
HERC4-201ENST00000277817 KRTAP12-2P59991 146 aa1.37□□□□□ -2.19
HERC4-201ENST00000277817 MACF1Q9UPN3 7388 aaKnown RBP1.36□□□□□ -2.19
HERC4-201ENST00000277817 KRTAP10-10P60014 251 aa1.35□□□□□ -2.19
HERC4-201ENST00000277817 KRTAP13-4Q3LI77 160 aa1.35□□□□□ -2.19
HERC4-201ENST00000277817 PP632Q6XCG6 107 aa1.35□□□□□ -2.19
HERC4-201ENST00000277817 MUC2Q02817 5179 aa1.35□□□□□ -2.19
HERC4-201ENST00000277817 USH2AO75445 5202 aa1.35□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms