RNA–Protein interactions for RNA: ENST00000273286.5

LRTM1-201, Transcript of leucine rich repeats and transmembrane domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRTM1, Length 1,423 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM1-201ENST00000273286 Q6ZVQ6 151 aa4.78□□□□□ -1.64
LRTM1-201ENST00000273286 MACF1Q9UPN3 7388 aaKnown RBP4.77□□□□□ -1.65
LRTM1-201ENST00000273286 MT1FP04733 61 aa4.77□□□□□ -1.65
LRTM1-201ENST00000273286 DEFB116Q30KQ4 102 aa4.77□□□□□ -1.65
LRTM1-201ENST00000273286 A8MWP4 228 aa4.76□□□□□ -1.65
LRTM1-201ENST00000273286 C8orf87E5RJ46 101 aa4.76□□□□□ -1.65
LRTM1-201ENST00000273286 IGHV6-1A0A0B4J1U7 121 aa4.75□□□□□ -1.65
LRTM1-201ENST00000273286 A0A1B0GVX0 72 aa4.75□□□□□ -1.65
LRTM1-201ENST00000273286 SYNE2Q8WXH0 6885 aaKnown RBP4.74□□□□□ -1.65
LRTM1-201ENST00000273286 ATP5EP2Q5VTU8 51 aa4.73□□□□□ -1.65
LRTM1-201ENST00000273286 K7ERU9 68 aa4.72□□□□□ -1.65
LRTM1-201ENST00000273286 CXCL6P80162 114 aa4.72□□□□□ -1.65
LRTM1-201ENST00000273286 PRR15Q8IV56 129 aa4.72□□□□□ -1.65
LRTM1-201ENST00000273286 IGKV3D-7A0A0C4DH55 119 aa4.72□□□□□ -1.65
LRTM1-201ENST00000273286 ZCCHC13Q8WW36 166 aaKnown RBP4.71□□□□□ -1.66
LRTM1-201ENST00000273286 K7EQZ3 153 aa4.7□□□□□ -1.66
LRTM1-201ENST00000273286 SPINK7P58062 85 aa4.69□□□□□ -1.66
LRTM1-201ENST00000273286 LINC00643Q86TS7 51 aa4.69□□□□□ -1.66
LRTM1-201ENST00000273286 C8orf17Q9NRJ1 99 aa4.69□□□□□ -1.66
LRTM1-201ENST00000273286 KRTAP19-6Q3LI70 58 aa4.67□□□□□ -1.66
LRTM1-201ENST00000273286 Q8N9L7 120 aa4.66□□□□□ -1.66
LRTM1-201ENST00000273286 TMEM254Q8TBM7 123 aa4.66□□□□□ -1.66
LRTM1-201ENST00000273286 MMP24-AS1A0A0U1RRL7 71 aa4.65□□□□□ -1.66
LRTM1-201ENST00000273286 hDV103S1A0JD37 113 aa4.65□□□□□ -1.66
LRTM1-201ENST00000273286 HCG22E2RYF7 251 aa4.65□□□□□ -1.66
LRTM1-201ENST00000273286 CASC2Q6XLA1 102 aa4.64□□□□□ -1.67
LRTM1-201ENST00000273286 MRPL34Q9BQ48 92 aaKnown RBP4.64□□□□□ -1.67
LRTM1-201ENST00000273286 HIST1H4AP62805 103 aaKnown RBP4.63□□□□□ -1.67
LRTM1-201ENST00000273286 WFDC13Q8IUB5 93 aa4.63□□□□□ -1.67
LRTM1-201ENST00000273286 NDUFS5O43920 106 aa4.62□□□□□ -1.67
LRTM1-201ENST00000273286 IMUPQ9GZP8 106 aa4.57□□□□□ -1.68
LRTM1-201ENST00000273286 TP53AIP1Q9HCN2 124 aa4.57□□□□□ -1.68
LRTM1-201ENST00000273286 KRTAP6-3Q3LI67 103 aa4.55□□□□□ -1.68
LRTM1-201ENST00000273286 H1FX-AS1Q4G0G2 97 aa4.55□□□□□ -1.68
LRTM1-201ENST00000273286 A0A087WVE0 104 aa4.54□□□□□ -1.68
LRTM1-201ENST00000273286 MT-ATP8P03928 68 aa4.53□□□□□ -1.68
LRTM1-201ENST00000273286 SCGB1A1P11684 91 aa4.52□□□□□ -1.69
LRTM1-201ENST00000273286 UQCRQO14949 82 aa4.5□□□□□ -1.69
LRTM1-201ENST00000273286 KRTAP5-5Q701N2 237 aaPredicted RBP4.49□□□□□ -1.69
LRTM1-201ENST00000273286 KRTAP5-2Q701N4 177 aa4.49□□□□□ -1.69
LRTM1-201ENST00000273286 TRAV22A0A0B4J277 110 aa4.48□□□□□ -1.69
LRTM1-201ENST00000273286 ATOX1O00244 68 aa4.48□□□□□ -1.69
LRTM1-201ENST00000273286 C7orf65Q6ZTY9 151 aa4.48□□□□□ -1.69
LRTM1-201ENST00000273286 Q5W150 140 aa4.47□□□□□ -1.69
LRTM1-201ENST00000273286 SMIM20Q8N5G0 67 aa4.47□□□□□ -1.69
LRTM1-201ENST00000273286 FAM236AA0A1B0GUQ0 79 aa4.46□□□□□ -1.69
LRTM1-201ENST00000273286 FAM236BA0A1B0GV22 79 aa4.46□□□□□ -1.69
LRTM1-201ENST00000273286 MP68P56378 58 aa4.46□□□□□ -1.7
LRTM1-201ENST00000273286 NEBP20929 6669 aa4.45□□□□□ -1.7
LRTM1-201ENST00000273286 OCR1Q9BZK8 76 aa4.45□□□□□ -1.7
LRTM1-201ENST00000273286 LOC101927531A0A1B0GV80 90 aa4.44□□□□□ -1.7
LRTM1-201ENST00000273286 H0Y9P7 68 aa4.44□□□□□ -1.7
LRTM1-201ENST00000273286 C5orf47Q569G3 176 aa4.44□□□□□ -1.7
LRTM1-201ENST00000273286 A6NN06 94 aa4.41□□□□□ -1.7
LRTM1-201ENST00000273286 H3BPC8 53 aa4.41□□□□□ -1.7
LRTM1-201ENST00000273286 TRAV7A0A075B6U4 112 aa4.4□□□□□ -1.7
LRTM1-201ENST00000273286 C1orf64Q8NEQ6 169 aa4.39□□□□□ -1.71
LRTM1-201ENST00000273286 MUC12Q9UKN1 5478 aa4.39□□□□□ -1.71
LRTM1-201ENST00000273286 C4orf26Q17RF5 130 aa4.38□□□□□ -1.71
LRTM1-201ENST00000273286 Q5VV11 94 aa4.38□□□□□ -1.71
LRTM1-201ENST00000273286 LINC00208Q96KT6 92 aa4.38□□□□□ -1.71
LRTM1-201ENST00000273286 CYP4F30PQ9H0H9 118 aa4.38□□□□□ -1.71
LRTM1-201ENST00000273286 CSAG1Q6PB30 78 aa4.37□□□□□ -1.71
LRTM1-201ENST00000273286 SERP2Q8N6R1 65 aa4.36□□□□□ -1.71
LRTM1-201ENST00000273286 SPRR2GQ9BYE4 73 aa4.35□□□□□ -1.71
LRTM1-201ENST00000273286 S4R3F8 94 aa4.34□□□□□ -1.71
LRTM1-201ENST00000273286 MT1BP07438 61 aa4.33□□□□□ -1.72
LRTM1-201ENST00000273286 KRTAP19-8Q3LI54 63 aa4.33□□□□□ -1.72
LRTM1-201ENST00000273286 KLKP1Q107X0 134 aa4.29□□□□□ -1.72
LRTM1-201ENST00000273286 ANAPC13Q9BS18 74 aa4.29□□□□□ -1.72
LRTM1-201ENST00000273286 A8MUN3 132 aa4.29□□□□□ -1.72
LRTM1-201ENST00000273286 COX7CP15954 63 aa4.29□□□□□ -1.72
LRTM1-201ENST00000273286 KRTAP20-1Q3LI63 56 aa4.29□□□□□ -1.72
LRTM1-201ENST00000273286 LCA10Q71F78 164 aa4.29□□□□□ -1.72
LRTM1-201ENST00000273286 C20orf197Q8N268 126 aa4.28□□□□□ -1.72
LRTM1-201ENST00000273286 CRIPTQ9P021 101 aa4.28□□□□□ -1.72
LRTM1-201ENST00000273286 KMT2DO14686 5537 aa4.26□□□□□ -1.73
LRTM1-201ENST00000273286 SNURFQ9Y675 71 aa4.26□□□□□ -1.73
LRTM1-201ENST00000273286 MDN1Q9NU22 5596 aa4.26□□□□□ -1.73
LRTM1-201ENST00000273286 LCE1CQ5T751 118 aa4.25□□□□□ -1.73
LRTM1-201ENST00000273286 LCE1BQ5T7P3 118 aa4.25□□□□□ -1.73
LRTM1-201ENST00000273286 NDUFC1O43677 76 aa4.24□□□□□ -1.73
LRTM1-201ENST00000273286 SPANXA2-OT1Q8N9U9 137 aa4.21□□□□□ -1.73
LRTM1-201ENST00000273286 DMAC1Q96GE9 116 aa4.21□□□□□ -1.73
LRTM1-201ENST00000273286 ACYP2P14621 99 aa4.18□□□□□ -1.74
LRTM1-201ENST00000273286 H0YAA0 97 aa4.17□□□□□ -1.74
LRTM1-201ENST00000273286 PRO2289Q9P1D8 64 aa4.16□□□□□ -1.74
LRTM1-201ENST00000273286 KRTAP2-3P0C7H8 128 aa4.15□□□□□ -1.74
LRTM1-201ENST00000273286 KRTAP2-4Q9BYR9 128 aa4.15□□□□□ -1.74
LRTM1-201ENST00000273286 CCDC179H3BU77 68 aa4.14□□□□□ -1.75
LRTM1-201ENST00000273286 H7BZZ5 65 aa4.14□□□□□ -1.75
LRTM1-201ENST00000273286 CHKB-CPT1BH3BT56 60 aa4.13□□□□□ -1.75
LRTM1-201ENST00000273286 SPTSSBQ8NFR3 76 aa4.13□□□□□ -1.75
LRTM1-201ENST00000273286 ATP5EP56381 51 aaPredicted RBP4.11□□□□□ -1.75
LRTM1-201ENST00000273286 CYSTM1Q9H1C7 97 aa4.1□□□□□ -1.75
LRTM1-201ENST00000273286 SPRR2FQ96RM1 72 aa4.09□□□□□ -1.75
LRTM1-201ENST00000273286 SPRR2EP22531 72 aa4.07□□□□□ -1.76
LRTM1-201ENST00000273286 SPRR2BP35325 72 aa4.07□□□□□ -1.76
LRTM1-201ENST00000273286 SPRR2AP35326 72 aa4.07□□□□□ -1.76
LRTM1-201ENST00000273286 TMEM258P61165 79 aa4.07□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 8.1 ms