RNA–Protein interactions for RNA: ENST00000270349.11

SLC6A3-201, Transcript of solute carrier family 6 member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC6A3, Length 3,936 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A3-201ENST00000270349 EPPK1P58107 5090 aaKnown RBP6.3□□□□□ -1.4
SLC6A3-201ENST00000270349 CSAG1Q6PB30 78 aa6.29□□□□□ -1.4
SLC6A3-201ENST00000270349 MYCBP2O75592 4640 aa6.27□□□□□ -1.4
SLC6A3-201ENST00000270349 LINC01554Q52M75 96 aa6.27□□□□□ -1.41
SLC6A3-201ENST00000270349 PKHD1L1Q86WI1 4243 aa6.25□□□□□ -1.41
SLC6A3-201ENST00000270349 CRIPTQ9P021 101 aa6.25□□□□□ -1.41
SLC6A3-201ENST00000270349 COX6B2Q6YFQ2 88 aa6.21□□□□□ -1.42
SLC6A3-201ENST00000270349 FAT3Q8TDW7 4589 aa6.2□□□□□ -1.42
SLC6A3-201ENST00000270349 TNXBP22105 4242 aa6.19□□□□□ -1.42
SLC6A3-201ENST00000270349 SPATA8Q6RVD6 105 aa6.19□□□□□ -1.42
SLC6A3-201ENST00000270349 TPRXLQ17RH7 258 aa6.18□□□□□ -1.42
SLC6A3-201ENST00000270349 K7ERS5 55 aa6.17□□□□□ -1.42
SLC6A3-201ENST00000270349 SEC61BP60468 96 aaKnown RBP6.13□□□□□ -1.43
SLC6A3-201ENST00000270349 A0A1B0GU33 70 aa6.1□□□□□ -1.43
SLC6A3-201ENST00000270349 A0A0D9SG42 100 aa6.1□□□□□ -1.43
SLC6A3-201ENST00000270349 KRTAP3-1Q9BYR8 98 aa6.09□□□□□ -1.43
SLC6A3-201ENST00000270349 S4R3F8 94 aa6.08□□□□□ -1.44
SLC6A3-201ENST00000270349 HERC2O95714 4834 aa6.06□□□□□ -1.44
SLC6A3-201ENST00000270349 BIRC6Q9NR09 4857 aa6.02□□□□□ -1.45
SLC6A3-201ENST00000270349 ABCA13Q86UQ4 5058 aa6.02□□□□□ -1.45
SLC6A3-201ENST00000270349 H1FX-AS1Q4G0G2 97 aa6.02□□□□□ -1.45
SLC6A3-201ENST00000270349 A0A0A0MQY5 61 aa5.99□□□□□ -1.45
SLC6A3-201ENST00000270349 SPINT4Q6UDR6 99 aa5.98□□□□□ -1.45
SLC6A3-201ENST00000270349 H0YAA0 97 aa5.97□□□□□ -1.45
SLC6A3-201ENST00000270349 LRP2P98164 4655 aa5.96□□□□□ -1.46
SLC6A3-201ENST00000270349 LPAP08519 4548 aa5.92□□□□□ -1.46
SLC6A3-201ENST00000270349 KRTAP25-1Q3LHN0 102 aa5.92□□□□□ -1.46
SLC6A3-201ENST00000270349 ROMO1P60602 79 aa5.83□□□□□ -1.48
SLC6A3-201ENST00000270349 KRTAP3-3Q9BYR6 98 aa5.82□□□□□ -1.48
SLC6A3-201ENST00000270349 C10orf95Q9H7T3 257 aa5.79□□□□□ -1.48
SLC6A3-201ENST00000270349 P0C880 135 aa5.77□□□□□ -1.49
SLC6A3-201ENST00000270349 KRTAP4-1Q9BYQ7 146 aa5.77□□□□□ -1.49
SLC6A3-201ENST00000270349 KRTAP10-6P60371 365 aaPredicted RBP5.71□□□□□ -1.5
SLC6A3-201ENST00000270349 HERC1Q15751 4861 aa5.71□□□□□ -1.5
SLC6A3-201ENST00000270349 PCLOQ9Y6V0 5065 aa5.71□□□□□ -1.5
SLC6A3-201ENST00000270349 R4GN34 69 aa5.71□□□□□ -1.5
SLC6A3-201ENST00000270349 M0R2T5 61 aa5.7□□□□□ -1.5
SLC6A3-201ENST00000270349 M0QZ58 72 aa5.69□□□□□ -1.5
SLC6A3-201ENST00000270349 KRTAP3-2Q9BYR7 98 aa5.67□□□□□ -1.5
SLC6A3-201ENST00000270349 NDUFAF8A1L188 74 aa5.66□□□□□ -1.5
SLC6A3-201ENST00000270349 KRTAP13-4Q3LI77 160 aa5.63□□□□□ -1.51
SLC6A3-201ENST00000270349 HMCN2Q8NDA2 5059 aa5.57□□□□□ -1.52
SLC6A3-201ENST00000270349 MUC2Q02817 5179 aa5.55□□□□□ -1.52
SLC6A3-201ENST00000270349 MUC17Q685J3 4493 aa5.54□□□□□ -1.52
SLC6A3-201ENST00000270349 KRTAP12-2P59991 146 aa5.52□□□□□ -1.53
SLC6A3-201ENST00000270349 CAMK2N1Q7Z7J9 78 aa5.46□□□□□ -1.54
SLC6A3-201ENST00000270349 KRTAP19-2Q3LHN2 52 aa5.45□□□□□ -1.54
SLC6A3-201ENST00000270349 LORP23490 312 aaPredicted RBP5.45□□□□□ -1.54
SLC6A3-201ENST00000270349 KRTAP12-1P59990 96 aa5.44□□□□□ -1.54
SLC6A3-201ENST00000270349 FLGP20930 4061 aaPredicted RBP5.41□□□□□ -1.54
SLC6A3-201ENST00000270349 UBR4Q5T4S7 5183 aa5.41□□□□□ -1.54
SLC6A3-201ENST00000270349 RNF213Q63HN8 5207 aa5.4□□□□□ -1.55
SLC6A3-201ENST00000270349 KRTAP10-10P60014 251 aa5.37□□□□□ -1.55
SLC6A3-201ENST00000270349 LUZP6Q538Z0 58 aa5.36□□□□□ -1.55
SLC6A3-201ENST00000270349 LCE2CQ5TA81 110 aa5.34□□□□□ -1.55
SLC6A3-201ENST00000270349 MT1HP80294 61 aa5.34□□□□□ -1.56
SLC6A3-201ENST00000270349 FAT4Q6V0I7 4981 aa5.33□□□□□ -1.56
SLC6A3-201ENST00000270349 PLAC4Q8WY50 150 aa5.3□□□□□ -1.56
SLC6A3-201ENST00000270349 KRTAP15-1Q3LI76 137 aa5.27□□□□□ -1.57
SLC6A3-201ENST00000270349 MT2AP02795 61 aa5.18□□□□□ -1.58
SLC6A3-201ENST00000270349 MT1FP04733 61 aa5.16□□□□□ -1.58
SLC6A3-201ENST00000270349 TNP1P09430 55 aa5.11□□□□□ -1.59
SLC6A3-201ENST00000270349 SPRR2GQ9BYE4 73 aa5.1□□□□□ -1.59
SLC6A3-201ENST00000270349 KRTAP9-8Q9BYQ0 159 aa5.1□□□□□ -1.59
SLC6A3-201ENST00000270349 KRTAP19-1Q8IUB9 90 aa5.08□□□□□ -1.6
SLC6A3-201ENST00000270349 PP632Q6XCG6 107 aa4.97□□□□□ -1.61
SLC6A3-201ENST00000270349 PRO2289Q9P1D8 64 aa4.91□□□□□ -1.62
SLC6A3-201ENST00000270349 KRTAP19-8Q3LI54 63 aa4.91□□□□□ -1.62
SLC6A3-201ENST00000270349 KRTAP9-3Q9BYQ3 159 aa4.91□□□□□ -1.62
SLC6A3-201ENST00000270349 MT1BP07438 61 aa4.87□□□□□ -1.63
SLC6A3-201ENST00000270349 LCE2AQ5TA79 106 aaPredicted RBP4.87□□□□□ -1.63
SLC6A3-201ENST00000270349 LCE2BO14633 110 aa4.78□□□□□ -1.65
SLC6A3-201ENST00000270349 MT1XP80297 61 aa4.77□□□□□ -1.65
SLC6A3-201ENST00000270349 LCE3AQ5TA76 89 aa4.76□□□□□ -1.65
SLC6A3-201ENST00000270349 KRTAP10-5P60370 271 aa4.75□□□□□ -1.65
SLC6A3-201ENST00000270349 KRTAP10-12P60413 245 aa4.74□□□□□ -1.65
SLC6A3-201ENST00000270349 KRTAP23-1A1A580 65 aa4.72□□□□□ -1.65
SLC6A3-201ENST00000270349 USH2AO75445 5202 aa4.66□□□□□ -1.66
SLC6A3-201ENST00000270349 KRTAP10-7P60409 375 aaPredicted RBP4.65□□□□□ -1.66
SLC6A3-201ENST00000270349 FSIP2Q5CZC0 6907 aa4.64□□□□□ -1.67
SLC6A3-201ENST00000270349 KRTAP12-3P60328 96 aa4.58□□□□□ -1.68
SLC6A3-201ENST00000270349 KRTAP8-1Q8IUC2 63 aa4.54□□□□□ -1.68
SLC6A3-201ENST00000270349 KRTAP4-8A0A0G2JLE6 195 aa4.46□□□□□ -1.69
SLC6A3-201ENST00000270349 KRTAP4-8Q9BYQ9 185 aa4.46□□□□□ -1.69
SLC6A3-201ENST00000270349 KRTAP19-5Q3LI72 72 aa4.45□□□□□ -1.7
SLC6A3-201ENST00000270349 SSPOA2VEC9 5147 aa4.41□□□□□ -1.7
SLC6A3-201ENST00000270349 KMT2DO14686 5537 aa4.41□□□□□ -1.7
SLC6A3-201ENST00000270349 KRTAP19-6Q3LI70 58 aa4.39□□□□□ -1.71
SLC6A3-201ENST00000270349 LCE2DQ5TA82 110 aaPredicted RBP4.36□□□□□ -1.71
SLC6A3-201ENST00000270349 SPRR5A0A1B0GTR4 108 aa4.34□□□□□ -1.71
SLC6A3-201ENST00000270349 KRTAP9-2Q9BYQ4 174 aa4.25□□□□□ -1.73
SLC6A3-201ENST00000270349 INE1O15225 51 aa4.23□□□□□ -1.73
SLC6A3-201ENST00000270349 LCE3CQ5T5A8 94 aa4.23□□□□□ -1.73
SLC6A3-201ENST00000270349 FCGBPQ9Y6R7 5405 aaPredicted RBP4.22□□□□□ -1.73
SLC6A3-201ENST00000270349 KRTAP19-7Q3SYF9 63 aa4.22□□□□□ -1.73
SLC6A3-201ENST00000270349 MT1EP04732 61 aa4.18□□□□□ -1.74
SLC6A3-201ENST00000270349 SPRR2FQ96RM1 72 aa4.17□□□□□ -1.74
SLC6A3-201ENST00000270349 CRCT1Q9UGL9 99 aa4.15□□□□□ -1.74
SLC6A3-201ENST00000270349 MT1LQ93083 61 aa4.13□□□□□ -1.75
SLC6A3-201ENST00000270349 KRTAP4-7Q9BYR0 210 aa4.12□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms