RNA–Protein interactions for RNA: ENST00000268607.9

MAP1LC3B-201, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MAP1LC3B, Length 2,688 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-201ENST00000268607 CRIPTQ9P021 101 aa8.8□□□□□ -1
MAP1LC3B-201ENST00000268607 KRTAP4-5Q9BYR2 181 aa8.76□□□□□ -1.01
MAP1LC3B-201ENST00000268607 P0C880 135 aa8.76□□□□□ -1.01
MAP1LC3B-201ENST00000268607 ABCA13Q86UQ4 5058 aa8.7□□□□□ -1.02
MAP1LC3B-201ENST00000268607 TNXBP22105 4242 aa8.69□□□□□ -1.02
MAP1LC3B-201ENST00000268607 FAT3Q8TDW7 4589 aa8.67□□□□□ -1.02
MAP1LC3B-201ENST00000268607 A0A1B0GU33 70 aa8.67□□□□□ -1.02
MAP1LC3B-201ENST00000268607 C9orf92A6NGG3 77 aa8.63□□□□□ -1.03
MAP1LC3B-201ENST00000268607 HERC2O95714 4834 aa8.6□□□□□ -1.03
MAP1LC3B-201ENST00000268607 BIRC6Q9NR09 4857 aa8.59□□□□□ -1.04
MAP1LC3B-201ENST00000268607 H1FX-AS1Q4G0G2 97 aa8.58□□□□□ -1.04
MAP1LC3B-201ENST00000268607 RPS29P62273 56 aaKnown RBP8.54□□□□□ -1.04
MAP1LC3B-201ENST00000268607 KRTAP3-1Q9BYR8 98 aa8.53□□□□□ -1.04
MAP1LC3B-201ENST00000268607 KRTAP10-8P60410 259 aa8.51□□□□□ -1.05
MAP1LC3B-201ENST00000268607 PCLOQ9Y6V0 5065 aa8.51□□□□□ -1.05
MAP1LC3B-201ENST00000268607 K7ERS5 55 aa8.51□□□□□ -1.05
MAP1LC3B-201ENST00000268607 MT1HL1P0DM35 61 aa8.48□□□□□ -1.05
MAP1LC3B-201ENST00000268607 SPINT4Q6UDR6 99 aa8.48□□□□□ -1.05
MAP1LC3B-201ENST00000268607 LPAP08519 4548 aa8.44□□□□□ -1.06
MAP1LC3B-201ENST00000268607 COX6B2Q6YFQ2 88 aa8.42□□□□□ -1.06
MAP1LC3B-201ENST00000268607 NDUFAF8A1L188 74 aa8.42□□□□□ -1.06
MAP1LC3B-201ENST00000268607 TPRXLQ17RH7 258 aa8.4□□□□□ -1.07
MAP1LC3B-201ENST00000268607 C20orf166-AS1Q96NR2 134 aa8.39□□□□□ -1.07
MAP1LC3B-201ENST00000268607 HERC1Q15751 4861 aa8.38□□□□□ -1.07
MAP1LC3B-201ENST00000268607 LRP2P98164 4655 aa8.34□□□□□ -1.07
MAP1LC3B-201ENST00000268607 C10orf95Q9H7T3 257 aa8.33□□□□□ -1.08
MAP1LC3B-201ENST00000268607 KRTAP15-1Q3LI76 137 aa8.3□□□□□ -1.08
MAP1LC3B-201ENST00000268607 RPL37P61927 97 aaKnown RBP8.28□□□□□ -1.08
MAP1LC3B-201ENST00000268607 A0A0D9SG42 100 aa8.27□□□□□ -1.09
MAP1LC3B-201ENST00000268607 J3QL48 77 aa8.27□□□□□ -1.09
MAP1LC3B-201ENST00000268607 KRTAP13-4Q3LI77 160 aa8.22□□□□□ -1.09
MAP1LC3B-201ENST00000268607 KRTAP10-6P60371 365 aaPredicted RBP8.19□□□□□ -1.1
MAP1LC3B-201ENST00000268607 MUC2Q02817 5179 aa8.16□□□□□ -1.1
MAP1LC3B-201ENST00000268607 XP32Q5T750 250 aa8.14□□□□□ -1.11
MAP1LC3B-201ENST00000268607 KRTAP3-3Q9BYR6 98 aa8.12□□□□□ -1.11
MAP1LC3B-201ENST00000268607 KRTAP3-2Q9BYR7 98 aa8.09□□□□□ -1.11
MAP1LC3B-201ENST00000268607 A0A0A0MQY5 61 aa8.09□□□□□ -1.11
MAP1LC3B-201ENST00000268607 S4R3F8 94 aa8.02□□□□□ -1.13
MAP1LC3B-201ENST00000268607 KRTAP12-2P59991 146 aa8□□□□□ -1.13
MAP1LC3B-201ENST00000268607 HMCN2Q8NDA2 5059 aa7.99□□□□□ -1.13
MAP1LC3B-201ENST00000268607 RNF213Q63HN8 5207 aa7.95□□□□□ -1.14
MAP1LC3B-201ENST00000268607 UBR4Q5T4S7 5183 aa7.93□□□□□ -1.14
MAP1LC3B-201ENST00000268607 KRTAP12-1P59990 96 aa7.86□□□□□ -1.15
MAP1LC3B-201ENST00000268607 KRTAP4-1Q9BYQ7 146 aa7.82□□□□□ -1.16
MAP1LC3B-201ENST00000268607 LUZP6Q538Z0 58 aa7.81□□□□□ -1.16
MAP1LC3B-201ENST00000268607 MUC17Q685J3 4493 aa7.77□□□□□ -1.17
MAP1LC3B-201ENST00000268607 FAT4Q6V0I7 4981 aa7.75□□□□□ -1.17
MAP1LC3B-201ENST00000268607 SEC61BP60468 96 aaKnown RBP7.68□□□□□ -1.18
MAP1LC3B-201ENST00000268607 PLAC4Q8WY50 150 aa7.65□□□□□ -1.18
MAP1LC3B-201ENST00000268607 M0QZ58 72 aa7.64□□□□□ -1.19
MAP1LC3B-201ENST00000268607 KRTAP19-2Q3LHN2 52 aa7.45□□□□□ -1.22
MAP1LC3B-201ENST00000268607 R4GN34 69 aa7.44□□□□□ -1.22
MAP1LC3B-201ENST00000268607 FLGP20930 4061 aaPredicted RBP7.36□□□□□ -1.23
MAP1LC3B-201ENST00000268607 LORP23490 312 aaPredicted RBP7.34□□□□□ -1.24
MAP1LC3B-201ENST00000268607 LCE2CQ5TA81 110 aa7.31□□□□□ -1.24
MAP1LC3B-201ENST00000268607 M0R2T5 61 aa7.2□□□□□ -1.26
MAP1LC3B-201ENST00000268607 PP632Q6XCG6 107 aa7.18□□□□□ -1.26
MAP1LC3B-201ENST00000268607 MT1HP80294 61 aa7.16□□□□□ -1.26
MAP1LC3B-201ENST00000268607 CAMK2N1Q7Z7J9 78 aa7.13□□□□□ -1.27
MAP1LC3B-201ENST00000268607 SPRR5A0A1B0GTR4 108 aa6.94□□□□□ -1.3
MAP1LC3B-201ENST00000268607 MT1FP04733 61 aa6.89□□□□□ -1.31
MAP1LC3B-201ENST00000268607 KRTAP9-8Q9BYQ0 159 aa6.89□□□□□ -1.31
MAP1LC3B-201ENST00000268607 KRTAP10-10P60014 251 aa6.88□□□□□ -1.31
MAP1LC3B-201ENST00000268607 MT2AP02795 61 aa6.88□□□□□ -1.31
MAP1LC3B-201ENST00000268607 TNP1P09430 55 aa6.87□□□□□ -1.31
MAP1LC3B-201ENST00000268607 USH2AO75445 5202 aa6.84□□□□□ -1.31
MAP1LC3B-201ENST00000268607 PRO2289Q9P1D8 64 aa6.81□□□□□ -1.32
MAP1LC3B-201ENST00000268607 KRTAP23-1A1A580 65 aa6.81□□□□□ -1.32
MAP1LC3B-201ENST00000268607 LCE2AQ5TA79 106 aaPredicted RBP6.8□□□□□ -1.32
MAP1LC3B-201ENST00000268607 FSIP2Q5CZC0 6907 aa6.78□□□□□ -1.32
MAP1LC3B-201ENST00000268607 KRTAP19-1Q8IUB9 90 aa6.73□□□□□ -1.33
MAP1LC3B-201ENST00000268607 SPRR2GQ9BYE4 73 aa6.68□□□□□ -1.34
MAP1LC3B-201ENST00000268607 KRTAP9-3Q9BYQ3 159 aa6.62□□□□□ -1.35
MAP1LC3B-201ENST00000268607 INE1O15225 51 aa6.57□□□□□ -1.36
MAP1LC3B-201ENST00000268607 LCE2BO14633 110 aa6.53□□□□□ -1.36
MAP1LC3B-201ENST00000268607 LCE3AQ5TA76 89 aa6.51□□□□□ -1.37
MAP1LC3B-201ENST00000268607 MT1BP07438 61 aa6.47□□□□□ -1.37
MAP1LC3B-201ENST00000268607 KRTAP19-8Q3LI54 63 aa6.4□□□□□ -1.38
MAP1LC3B-201ENST00000268607 SSPOA2VEC9 5147 aa6.38□□□□□ -1.39
MAP1LC3B-201ENST00000268607 KMT2DO14686 5537 aa6.34□□□□□ -1.39
MAP1LC3B-201ENST00000268607 KRTAP10-5P60370 271 aa6.31□□□□□ -1.4
MAP1LC3B-201ENST00000268607 MT1XP80297 61 aa6.31□□□□□ -1.4
MAP1LC3B-201ENST00000268607 KRTAP8-1Q8IUC2 63 aa6.27□□□□□ -1.41
MAP1LC3B-201ENST00000268607 KRTAP10-7P60409 375 aaPredicted RBP6.17□□□□□ -1.42
MAP1LC3B-201ENST00000268607 KRTAP12-3P60328 96 aa6.14□□□□□ -1.43
MAP1LC3B-201ENST00000268607 KRTAP10-12P60413 245 aa6.11□□□□□ -1.43
MAP1LC3B-201ENST00000268607 FCGBPQ9Y6R7 5405 aaPredicted RBP6.06□□□□□ -1.44
MAP1LC3B-201ENST00000268607 KRTAP9-2Q9BYQ4 174 aa6.02□□□□□ -1.45
MAP1LC3B-201ENST00000268607 LCE2DQ5TA82 110 aaPredicted RBP6□□□□□ -1.45
MAP1LC3B-201ENST00000268607 KRTAP4-8A0A0G2JLE6 195 aa6□□□□□ -1.45
MAP1LC3B-201ENST00000268607 KRTAP4-8Q9BYQ9 185 aa6□□□□□ -1.45
MAP1LC3B-201ENST00000268607 KRTAP19-6Q3LI70 58 aa5.92□□□□□ -1.46
MAP1LC3B-201ENST00000268607 MACF1Q9UPN3 7388 aaKnown RBP5.86□□□□□ -1.47
MAP1LC3B-201ENST00000268607 KRTAP19-5Q3LI72 72 aa5.85□□□□□ -1.47
MAP1LC3B-201ENST00000268607 SYNE2Q8WXH0 6885 aaKnown RBP5.81□□□□□ -1.48
MAP1LC3B-201ENST00000268607 LCE3CQ5T5A8 94 aa5.81□□□□□ -1.48
MAP1LC3B-201ENST00000268607 MUC12Q9UKN1 5478 aa5.79□□□□□ -1.48
MAP1LC3B-201ENST00000268607 CRCT1Q9UGL9 99 aa5.76□□□□□ -1.49
MAP1LC3B-201ENST00000268607 KRTAP9-6A8MVA2 160 aa5.69□□□□□ -1.5
MAP1LC3B-201ENST00000268607 KRTAP19-7Q3SYF9 63 aa5.62□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 71.8 ms