RNA–Protein interactions for RNA: ENST00000267935.12

COMMD4-201, Transcript of COMM domain containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COMMD4, Length 1,067 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-201ENST00000267935 UQCRQO14949 82 aa6.38□□□□□ -1.39
COMMD4-201ENST00000267935 IMUPQ9GZP8 106 aa6.38□□□□□ -1.39
COMMD4-201ENST00000267935 TRAV22A0A0B4J277 110 aa6.37□□□□□ -1.39
COMMD4-201ENST00000267935 SCGB1A1P11684 91 aa6.37□□□□□ -1.39
COMMD4-201ENST00000267935 C1orf64Q8NEQ6 169 aa6.37□□□□□ -1.39
COMMD4-201ENST00000267935 KRTAP10-5P60370 271 aa6.35□□□□□ -1.39
COMMD4-201ENST00000267935 MUC12Q9UKN1 5478 aa6.35□□□□□ -1.39
COMMD4-201ENST00000267935 H0Y9P7 68 aa6.34□□□□□ -1.39
COMMD4-201ENST00000267935 KLKP1Q107X0 134 aa6.33□□□□□ -1.4
COMMD4-201ENST00000267935 LCA10Q71F78 164 aa6.33□□□□□ -1.4
COMMD4-201ENST00000267935 ATOX1O00244 68 aa6.32□□□□□ -1.4
COMMD4-201ENST00000267935 KRTAP3-1Q9BYR8 98 aa6.32□□□□□ -1.4
COMMD4-201ENST00000267935 OCR1Q9BZK8 76 aa6.32□□□□□ -1.4
COMMD4-201ENST00000267935 LOC101927531A0A1B0GV80 90 aa6.31□□□□□ -1.4
COMMD4-201ENST00000267935 KRTAP5-9P26371 169 aa6.29□□□□□ -1.4
COMMD4-201ENST00000267935 MP68P56378 58 aa6.29□□□□□ -1.4
COMMD4-201ENST00000267935 CYP4F30PQ9H0H9 118 aa6.29□□□□□ -1.4
COMMD4-201ENST00000267935 CRIPTQ9P021 101 aa6.28□□□□□ -1.4
COMMD4-201ENST00000267935 LINC00208Q96KT6 92 aa6.26□□□□□ -1.41
COMMD4-201ENST00000267935 SMIM20Q8N5G0 67 aa6.23□□□□□ -1.41
COMMD4-201ENST00000267935 H3BPC8 53 aa6.21□□□□□ -1.42
COMMD4-201ENST00000267935 TRAV7A0A075B6U4 112 aa6.2□□□□□ -1.42
COMMD4-201ENST00000267935 KRTAP2-3P0C7H8 128 aa6.18□□□□□ -1.42
COMMD4-201ENST00000267935 KRTAP2-4Q9BYR9 128 aa6.18□□□□□ -1.42
COMMD4-201ENST00000267935 KRTAP3-3Q9BYR6 98 aa6.17□□□□□ -1.42
COMMD4-201ENST00000267935 KMT2DO14686 5537 aa6.16□□□□□ -1.42
COMMD4-201ENST00000267935 MDN1Q9NU22 5596 aa6.12□□□□□ -1.43
COMMD4-201ENST00000267935 NDUFC1O43677 76 aa6.11□□□□□ -1.43
COMMD4-201ENST00000267935 PRO2289Q9P1D8 64 aa6.11□□□□□ -1.43
COMMD4-201ENST00000267935 SERP2Q8N6R1 65 aa6.1□□□□□ -1.43
COMMD4-201ENST00000267935 SPRR2FQ96RM1 72 aa6.08□□□□□ -1.44
COMMD4-201ENST00000267935 A8MUN3 132 aa6.07□□□□□ -1.44
COMMD4-201ENST00000267935 H0YAA0 97 aa6.06□□□□□ -1.44
COMMD4-201ENST00000267935 SPRR2EP22531 72 aa6.06□□□□□ -1.44
COMMD4-201ENST00000267935 SPRR2BP35325 72 aa6.06□□□□□ -1.44
COMMD4-201ENST00000267935 SPRR2AP35326 72 aa6.06□□□□□ -1.44
COMMD4-201ENST00000267935 SNURFQ9Y675 71 aa6.06□□□□□ -1.44
COMMD4-201ENST00000267935 C20orf197Q8N268 126 aa6.05□□□□□ -1.44
COMMD4-201ENST00000267935 PLAC4Q8WY50 150 aa6.03□□□□□ -1.44
COMMD4-201ENST00000267935 COX7CP15954 63 aa6□□□□□ -1.45
COMMD4-201ENST00000267935 ADM2Q7Z4H4 148 aa5.99□□□□□ -1.45
COMMD4-201ENST00000267935 KRTAP8-1Q8IUC2 63 aa5.99□□□□□ -1.45
COMMD4-201ENST00000267935 DMAC1Q96GE9 116 aa5.99□□□□□ -1.45
COMMD4-201ENST00000267935 ANAPC13Q9BS18 74 aa5.97□□□□□ -1.45
COMMD4-201ENST00000267935 KRTAP2-2Q9BYT5 123 aa5.97□□□□□ -1.45
COMMD4-201ENST00000267935 KRTAP2-1Q9BYU5 128 aa5.97□□□□□ -1.45
COMMD4-201ENST00000267935 MT1XP80297 61 aa5.94□□□□□ -1.46
COMMD4-201ENST00000267935 ACYP2P14621 99 aa5.93□□□□□ -1.46
COMMD4-201ENST00000267935 SPANXA2-OT1Q8N9U9 137 aa5.91□□□□□ -1.46
COMMD4-201ENST00000267935 R4GN34 69 aa5.91□□□□□ -1.46
COMMD4-201ENST00000267935 KRTAP12-2P59991 146 aa5.9□□□□□ -1.46
COMMD4-201ENST00000267935 LCE1AQ5T7P2 110 aa5.9□□□□□ -1.46
COMMD4-201ENST00000267935 SPRR2DP22532 72 aa5.87□□□□□ -1.47
COMMD4-201ENST00000267935 CHKB-CPT1BH3BT56 60 aa5.86□□□□□ -1.47
COMMD4-201ENST00000267935 CYSTM1Q9H1C7 97 aa5.83□□□□□ -1.48
COMMD4-201ENST00000267935 CCDC179H3BU77 68 aa5.82□□□□□ -1.48
COMMD4-201ENST00000267935 H7BZZ5 65 aa5.82□□□□□ -1.48
COMMD4-201ENST00000267935 M0QZ58 72 aa5.82□□□□□ -1.48
COMMD4-201ENST00000267935 SPTSSBQ8NFR3 76 aa5.82□□□□□ -1.48
COMMD4-201ENST00000267935 KRTAP4-8A0A0G2JLE6 195 aa5.77□□□□□ -1.49
COMMD4-201ENST00000267935 P0C880 135 aa5.77□□□□□ -1.49
COMMD4-201ENST00000267935 KRTAP4-8Q9BYQ9 185 aa5.77□□□□□ -1.49
COMMD4-201ENST00000267935 LINC01554Q52M75 96 aa5.76□□□□□ -1.49
COMMD4-201ENST00000267935 COA5Q86WW8 74 aa5.75□□□□□ -1.49
COMMD4-201ENST00000267935 LCE3BQ5TA77 95 aa5.72□□□□□ -1.49
COMMD4-201ENST00000267935 ATP5EP56381 51 aaPredicted RBP5.66□□□□□ -1.5
COMMD4-201ENST00000267935 KRTAP10-7P60409 375 aaPredicted RBP5.66□□□□□ -1.5
COMMD4-201ENST00000267935 KRTAP10-12P60413 245 aa5.66□□□□□ -1.5
COMMD4-201ENST00000267935 KRTAP3-2Q9BYR7 98 aa5.65□□□□□ -1.5
COMMD4-201ENST00000267935 TMEM258P61165 79 aa5.62□□□□□ -1.51
COMMD4-201ENST00000267935 SEC61GP60059 68 aa5.57□□□□□ -1.52
COMMD4-201ENST00000267935 SERP1Q9Y6X1 66 aa5.56□□□□□ -1.52
COMMD4-201ENST00000267935 PCP4P48539 62 aa5.49□□□□□ -1.53
COMMD4-201ENST00000267935 A0A1B0GU69 56 aa5.47□□□□□ -1.53
COMMD4-201ENST00000267935 A0A1B0GU33 70 aa5.41□□□□□ -1.54
COMMD4-201ENST00000267935 CAMK2N1Q7Z7J9 78 aa5.41□□□□□ -1.54
COMMD4-201ENST00000267935 GPR98Q8WXG9 6306 aa5.4□□□□□ -1.54
COMMD4-201ENST00000267935 KRTAP13-4Q3LI77 160 aa5.4□□□□□ -1.54
COMMD4-201ENST00000267935 PRR15LQ9BU68 103 aa5.4□□□□□ -1.54
COMMD4-201ENST00000267935 LINC01558Q9Y6Z2 57 aa5.38□□□□□ -1.55
COMMD4-201ENST00000267935 LCE5AQ5TCM9 118 aa5.36□□□□□ -1.55
COMMD4-201ENST00000267935 SPATA8Q6RVD6 105 aa5.36□□□□□ -1.55
COMMD4-201ENST00000267935 KRTAP4-9Q9BYQ8 210 aa5.36□□□□□ -1.55
COMMD4-201ENST00000267935 DSTQ03001 7570 aaKnown RBP5.35□□□□□ -1.55
COMMD4-201ENST00000267935 A0A0D9SG42 100 aa5.33□□□□□ -1.56
COMMD4-201ENST00000267935 KRTAP19-3Q7Z4W3 81 aa5.33□□□□□ -1.56
COMMD4-201ENST00000267935 KRTAP19-7Q3SYF9 63 aa5.3□□□□□ -1.56
COMMD4-201ENST00000267935 MT1EP04732 61 aa5.29□□□□□ -1.56
COMMD4-201ENST00000267935 V9GYY9 64 aa5.28□□□□□ -1.56
COMMD4-201ENST00000267935 SMIM26A0A096LP01 95 aa5.27□□□□□ -1.57
COMMD4-201ENST00000267935 SPINT4Q6UDR6 99 aa5.24□□□□□ -1.57
COMMD4-201ENST00000267935 MT1GP13640 62 aa5.22□□□□□ -1.57
COMMD4-201ENST00000267935 RPS28P62857 69 aaKnown RBP5.22□□□□□ -1.57
COMMD4-201ENST00000267935 Q1T7F1 81 aa5.22□□□□□ -1.57
COMMD4-201ENST00000267935 PP632Q6XCG6 107 aa5.22□□□□□ -1.57
COMMD4-201ENST00000267935 A8MU10 97 aa5.21□□□□□ -1.58
COMMD4-201ENST00000267935 UQCR11O14957 56 aa5.21□□□□□ -1.58
COMMD4-201ENST00000267935 PSPHP1O15172 72 aa5.2□□□□□ -1.58
COMMD4-201ENST00000267935 LCE1DQ5T752 114 aa5.2□□□□□ -1.58
COMMD4-201ENST00000267935 LCE4AQ5TA78 99 aa5.19□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms