RNA–Protein interactions for RNA: ENST00000266079.4

PRPF6-201, Transcript of pre-mRNA processing factor 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF6, Length 3,044 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF6-201ENST00000266079 KRTAP10-8P60410 259 aa7.05□□□□□ -1.28
PRPF6-201ENST00000266079 MT1HL1P0DM35 61 aa7.04□□□□□ -1.28
PRPF6-201ENST00000266079 SPINK1P00995 79 aa7.02□□□□□ -1.29
PRPF6-201ENST00000266079 HERC1Q15751 4861 aa7□□□□□ -1.29
PRPF6-201ENST00000266079 J3QL48 77 aa7□□□□□ -1.29
PRPF6-201ENST00000266079 IGKV2D-30A0A075B6S6 120 aa7□□□□□ -1.29
PRPF6-201ENST00000266079 KRTAP16-1A8MUX0 517 aa6.99□□□□□ -1.29
PRPF6-201ENST00000266079 A8MUU9 505 aa6.9□□□□□ -1.3
PRPF6-201ENST00000266079 C9orf92A6NGG3 77 aa6.89□□□□□ -1.31
PRPF6-201ENST00000266079 KRTAP25-1Q3LHN0 102 aa6.89□□□□□ -1.31
PRPF6-201ENST00000266079 RPS29P62273 56 aaKnown RBP6.87□□□□□ -1.31
PRPF6-201ENST00000266079 H0YAA0 97 aa6.87□□□□□ -1.31
PRPF6-201ENST00000266079 LPAP08519 4548 aa6.86□□□□□ -1.31
PRPF6-201ENST00000266079 ROMO1P60602 79 aa6.83□□□□□ -1.32
PRPF6-201ENST00000266079 LRP2P98164 4655 aa6.82□□□□□ -1.32
PRPF6-201ENST00000266079 A0A1B0GU33 70 aa6.78□□□□□ -1.32
PRPF6-201ENST00000266079 H1FX-AS1Q4G0G2 97 aa6.74□□□□□ -1.33
PRPF6-201ENST00000266079 HMCN2Q8NDA2 5059 aa6.74□□□□□ -1.33
PRPF6-201ENST00000266079 CRIPTQ9P021 101 aa6.67□□□□□ -1.34
PRPF6-201ENST00000266079 K7ERS5 55 aa6.66□□□□□ -1.34
PRPF6-201ENST00000266079 KRTAP3-1Q9BYR8 98 aa6.66□□□□□ -1.34
PRPF6-201ENST00000266079 XP32Q5T750 250 aa6.66□□□□□ -1.34
PRPF6-201ENST00000266079 P0C880 135 aa6.63□□□□□ -1.35
PRPF6-201ENST00000266079 TPRXLQ17RH7 258 aa6.63□□□□□ -1.35
PRPF6-201ENST00000266079 MUC2Q02817 5179 aa6.62□□□□□ -1.35
PRPF6-201ENST00000266079 UBR4Q5T4S7 5183 aa6.62□□□□□ -1.35
PRPF6-201ENST00000266079 COX6B2Q6YFQ2 88 aa6.6□□□□□ -1.35
PRPF6-201ENST00000266079 C20orf166-AS1Q96NR2 134 aa6.58□□□□□ -1.36
PRPF6-201ENST00000266079 RNF213Q63HN8 5207 aa6.58□□□□□ -1.36
PRPF6-201ENST00000266079 RPL37P61927 97 aaKnown RBP6.55□□□□□ -1.36
PRPF6-201ENST00000266079 SPINT4Q6UDR6 99 aa6.48□□□□□ -1.37
PRPF6-201ENST00000266079 KRTAP10-6P60371 365 aaPredicted RBP6.42□□□□□ -1.38
PRPF6-201ENST00000266079 SEC61BP60468 96 aaKnown RBP6.42□□□□□ -1.38
PRPF6-201ENST00000266079 KRTAP13-4Q3LI77 160 aa6.41□□□□□ -1.38
PRPF6-201ENST00000266079 KRTAP4-1Q9BYQ7 146 aa6.4□□□□□ -1.38
PRPF6-201ENST00000266079 A0A0D9SG42 100 aa6.4□□□□□ -1.39
PRPF6-201ENST00000266079 KRTAP15-1Q3LI76 137 aa6.37□□□□□ -1.39
PRPF6-201ENST00000266079 C10orf95Q9H7T3 257 aa6.37□□□□□ -1.39
PRPF6-201ENST00000266079 MUC17Q685J3 4493 aa6.35□□□□□ -1.39
PRPF6-201ENST00000266079 NDUFAF8A1L188 74 aa6.35□□□□□ -1.39
PRPF6-201ENST00000266079 KRTAP3-3Q9BYR6 98 aa6.35□□□□□ -1.39
PRPF6-201ENST00000266079 KRTAP3-2Q9BYR7 98 aa6.35□□□□□ -1.39
PRPF6-201ENST00000266079 FAT4Q6V0I7 4981 aa6.35□□□□□ -1.39
PRPF6-201ENST00000266079 S4R3F8 94 aa6.28□□□□□ -1.4
PRPF6-201ENST00000266079 KRTAP12-2P59991 146 aa6.23□□□□□ -1.41
PRPF6-201ENST00000266079 A0A0A0MQY5 61 aa6.18□□□□□ -1.42
PRPF6-201ENST00000266079 KRTAP12-1P59990 96 aa6.17□□□□□ -1.42
PRPF6-201ENST00000266079 KRTAP19-2Q3LHN2 52 aa6.09□□□□□ -1.43
PRPF6-201ENST00000266079 FLGP20930 4061 aaPredicted RBP6.06□□□□□ -1.44
PRPF6-201ENST00000266079 LCE2CQ5TA81 110 aa6.05□□□□□ -1.44
PRPF6-201ENST00000266079 M0QZ58 72 aa6.04□□□□□ -1.44
PRPF6-201ENST00000266079 M0R2T5 61 aa6□□□□□ -1.45
PRPF6-201ENST00000266079 MT1HP80294 61 aa5.96□□□□□ -1.46
PRPF6-201ENST00000266079 PLAC4Q8WY50 150 aa5.92□□□□□ -1.46
PRPF6-201ENST00000266079 LUZP6Q538Z0 58 aa5.86□□□□□ -1.47
PRPF6-201ENST00000266079 R4GN34 69 aa5.8□□□□□ -1.48
PRPF6-201ENST00000266079 LCE2AQ5TA79 106 aaPredicted RBP5.77□□□□□ -1.49
PRPF6-201ENST00000266079 LORP23490 312 aaPredicted RBP5.72□□□□□ -1.49
PRPF6-201ENST00000266079 KRTAP10-10P60014 251 aa5.7□□□□□ -1.5
PRPF6-201ENST00000266079 KRTAP9-8Q9BYQ0 159 aa5.69□□□□□ -1.5
PRPF6-201ENST00000266079 MT2AP02795 61 aa5.69□□□□□ -1.5
PRPF6-201ENST00000266079 PP632Q6XCG6 107 aa5.69□□□□□ -1.5
PRPF6-201ENST00000266079 MT1FP04733 61 aa5.68□□□□□ -1.5
PRPF6-201ENST00000266079 FSIP2Q5CZC0 6907 aa5.63□□□□□ -1.51
PRPF6-201ENST00000266079 USH2AO75445 5202 aa5.59□□□□□ -1.51
PRPF6-201ENST00000266079 CAMK2N1Q7Z7J9 78 aa5.56□□□□□ -1.52
PRPF6-201ENST00000266079 KRTAP19-1Q8IUB9 90 aa5.5□□□□□ -1.53
PRPF6-201ENST00000266079 KRTAP9-3Q9BYQ3 159 aa5.48□□□□□ -1.53
PRPF6-201ENST00000266079 SPRR5A0A1B0GTR4 108 aa5.46□□□□□ -1.54
PRPF6-201ENST00000266079 SPRR2GQ9BYE4 73 aa5.42□□□□□ -1.54
PRPF6-201ENST00000266079 KRTAP23-1A1A580 65 aa5.41□□□□□ -1.54
PRPF6-201ENST00000266079 LCE2BO14633 110 aa5.41□□□□□ -1.54
PRPF6-201ENST00000266079 TNP1P09430 55 aa5.4□□□□□ -1.54
PRPF6-201ENST00000266079 SSPOA2VEC9 5147 aa5.34□□□□□ -1.55
PRPF6-201ENST00000266079 MT1BP07438 61 aa5.31□□□□□ -1.56
PRPF6-201ENST00000266079 KRTAP19-8Q3LI54 63 aa5.28□□□□□ -1.56
PRPF6-201ENST00000266079 KRTAP9-2Q9BYQ4 174 aa5.24□□□□□ -1.57
PRPF6-201ENST00000266079 PRO2289Q9P1D8 64 aa5.22□□□□□ -1.57
PRPF6-201ENST00000266079 LCE2DQ5TA82 110 aaPredicted RBP5.21□□□□□ -1.57
PRPF6-201ENST00000266079 FCGBPQ9Y6R7 5405 aaPredicted RBP5.11□□□□□ -1.59
PRPF6-201ENST00000266079 MT1XP80297 61 aa5.11□□□□□ -1.59
PRPF6-201ENST00000266079 INE1O15225 51 aa5.1□□□□□ -1.59
PRPF6-201ENST00000266079 KMT2DO14686 5537 aa5.09□□□□□ -1.59
PRPF6-201ENST00000266079 KRTAP10-5P60370 271 aa5.09□□□□□ -1.59
PRPF6-201ENST00000266079 LCE3AQ5TA76 89 aa5.07□□□□□ -1.6
PRPF6-201ENST00000266079 KRTAP19-6Q3LI70 58 aa5.01□□□□□ -1.61
PRPF6-201ENST00000266079 CRCT1Q9UGL9 99 aa5.01□□□□□ -1.61
PRPF6-201ENST00000266079 KRTAP10-7P60409 375 aaPredicted RBP4.96□□□□□ -1.62
PRPF6-201ENST00000266079 KRTAP8-1Q8IUC2 63 aa4.95□□□□□ -1.62
PRPF6-201ENST00000266079 MACF1Q9UPN3 7388 aaKnown RBP4.93□□□□□ -1.62
PRPF6-201ENST00000266079 SYNE2Q8WXH0 6885 aaKnown RBP4.9□□□□□ -1.63
PRPF6-201ENST00000266079 KRTAP4-8A0A0G2JLE6 195 aa4.86□□□□□ -1.63
PRPF6-201ENST00000266079 KRTAP4-8Q9BYQ9 185 aa4.86□□□□□ -1.63
PRPF6-201ENST00000266079 KRTAP9-6A0A140TA67 174 aa4.85□□□□□ -1.63
PRPF6-201ENST00000266079 KRTAP10-12P60413 245 aa4.81□□□□□ -1.64
PRPF6-201ENST00000266079 KRTAP12-3P60328 96 aa4.8□□□□□ -1.64
PRPF6-201ENST00000266079 MUC12Q9UKN1 5478 aa4.74□□□□□ -1.65
PRPF6-201ENST00000266079 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.64□□□□□ -1.67
PRPF6-201ENST00000266079 MDN1Q9NU22 5596 aa4.64□□□□□ -1.67
PRPF6-201ENST00000266079 KRTAP19-5Q3LI72 72 aa4.62□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 113.9 ms