RNA–Protein interactions for RNA: ENST00000265036.9

DEPDC1B-201, Transcript of DEP domain containing 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DEPDC1B, Length 2,499 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1B-201ENST00000265036 H1FX-AS1Q4G0G2 97 aa3.51□□□□□ -1.85
DEPDC1B-201ENST00000265036 MT2AP02795 61 aa3.5□□□□□ -1.85
DEPDC1B-201ENST00000265036 TMEM258P61165 79 aa3.5□□□□□ -1.85
DEPDC1B-201ENST00000265036 KRTAP3-1Q9BYR8 98 aa3.5□□□□□ -1.85
DEPDC1B-201ENST00000265036 CYP4F30PQ9H0H9 118 aa3.5□□□□□ -1.85
DEPDC1B-201ENST00000265036 MT1FP04733 61 aa3.49□□□□□ -1.85
DEPDC1B-201ENST00000265036 C1orf64Q8NEQ6 169 aa3.49□□□□□ -1.85
DEPDC1B-201ENST00000265036 OCR1Q9BZK8 76 aa3.49□□□□□ -1.85
DEPDC1B-201ENST00000265036 BRK1Q8WUW1 75 aa3.49□□□□□ -1.85
DEPDC1B-201ENST00000265036 LINC00208Q96KT6 92 aa3.49□□□□□ -1.85
DEPDC1B-201ENST00000265036 USH2AO75445 5202 aa3.49□□□□□ -1.85
DEPDC1B-201ENST00000265036 LOC101927531A0A1B0GV80 90 aa3.48□□□□□ -1.85
DEPDC1B-201ENST00000265036 KRTAP10-10P60014 251 aa3.47□□□□□ -1.85
DEPDC1B-201ENST00000265036 ATOX1O00244 68 aa3.46□□□□□ -1.86
DEPDC1B-201ENST00000265036 IMUPQ9GZP8 106 aa3.45□□□□□ -1.86
DEPDC1B-201ENST00000265036 MP68P56378 58 aa3.45□□□□□ -1.86
DEPDC1B-201ENST00000265036 KLKP1Q107X0 134 aa3.45□□□□□ -1.86
DEPDC1B-201ENST00000265036 PMAIP1Q13794 54 aa3.45□□□□□ -1.86
DEPDC1B-201ENST00000265036 KRTAP9-9Q9BYP9 154 aa3.45□□□□□ -1.86
DEPDC1B-201ENST00000265036 KRTAP9-4Q9BYQ2 154 aa3.45□□□□□ -1.86
DEPDC1B-201ENST00000265036 S4R3F8 94 aa3.45□□□□□ -1.86
DEPDC1B-201ENST00000265036 LCA10Q71F78 164 aa3.44□□□□□ -1.86
DEPDC1B-201ENST00000265036 SERP2Q8N6R1 65 aa3.41□□□□□ -1.86
DEPDC1B-201ENST00000265036 KRTAP4-2Q9BYR5 136 aa3.41□□□□□ -1.86
DEPDC1B-201ENST00000265036 SSPOA2VEC9 5147 aa3.41□□□□□ -1.86
DEPDC1B-201ENST00000265036 SERP1Q9Y6X1 66 aa3.41□□□□□ -1.86
DEPDC1B-201ENST00000265036 H3BS24 57 aa3.39□□□□□ -1.87
DEPDC1B-201ENST00000265036 KRTAP9-3Q9BYQ3 159 aa3.39□□□□□ -1.87
DEPDC1B-201ENST00000265036 CRCT1Q9UGL9 99 aa3.39□□□□□ -1.87
DEPDC1B-201ENST00000265036 SMIM26A0A096LP01 95 aa3.38□□□□□ -1.87
DEPDC1B-201ENST00000265036 CSAG1Q6PB30 78 aa3.38□□□□□ -1.87
DEPDC1B-201ENST00000265036 TRAV7A0A075B6U4 112 aa3.37□□□□□ -1.87
DEPDC1B-201ENST00000265036 SNURFQ9Y675 71 aa3.37□□□□□ -1.87
DEPDC1B-201ENST00000265036 C20orf197Q8N268 126 aa3.36□□□□□ -1.87
DEPDC1B-201ENST00000265036 H3BPC8 53 aa3.35□□□□□ -1.87
DEPDC1B-201ENST00000265036 H7BZZ5 65 aa3.35□□□□□ -1.87
DEPDC1B-201ENST00000265036 A8MUN3 132 aa3.33□□□□□ -1.88
DEPDC1B-201ENST00000265036 NDUFC1O43677 76 aa3.33□□□□□ -1.88
DEPDC1B-201ENST00000265036 DMAC1Q96GE9 116 aa3.32□□□□□ -1.88
DEPDC1B-201ENST00000265036 KRTAP4-9Q9BYQ8 210 aa3.31□□□□□ -1.88
DEPDC1B-201ENST00000265036 A8MU10 97 aa3.3□□□□□ -1.88
DEPDC1B-201ENST00000265036 LCE1DQ5T752 114 aa3.3□□□□□ -1.88
DEPDC1B-201ENST00000265036 KRTAP19-1Q8IUB9 90 aa3.29□□□□□ -1.88
DEPDC1B-201ENST00000265036 FCGBPQ9Y6R7 5405 aaPredicted RBP3.29□□□□□ -1.88
DEPDC1B-201ENST00000265036 ADM2Q7Z4H4 148 aa3.27□□□□□ -1.89
DEPDC1B-201ENST00000265036 MACF1Q9UPN3 7388 aaKnown RBP3.27□□□□□ -1.89
DEPDC1B-201ENST00000265036 KTN1-AS1Q86SY8 53 aa3.27□□□□□ -1.89
DEPDC1B-201ENST00000265036 KRTAP4-12Q9BQ66 201 aa3.27□□□□□ -1.89
DEPDC1B-201ENST00000265036 ACYP2P14621 99 aa3.24□□□□□ -1.89
DEPDC1B-201ENST00000265036 PSPHP1O15172 72 aa3.24□□□□□ -1.89
DEPDC1B-201ENST00000265036 P0C880 135 aa3.24□□□□□ -1.89
DEPDC1B-201ENST00000265036 SYNE2Q8WXH0 6885 aaKnown RBP3.23□□□□□ -1.89
DEPDC1B-201ENST00000265036 CHKB-CPT1BH3BT56 60 aa3.23□□□□□ -1.89
DEPDC1B-201ENST00000265036 SPRR2GQ9BYE4 73 aa3.23□□□□□ -1.89
DEPDC1B-201ENST00000265036 H0YAA0 97 aa3.21□□□□□ -1.89
DEPDC1B-201ENST00000265036 MT1BP07438 61 aa3.21□□□□□ -1.89
DEPDC1B-201ENST00000265036 ATP5EP56381 51 aaPredicted RBP3.21□□□□□ -1.89
DEPDC1B-201ENST00000265036 Q5VV11 94 aa3.2□□□□□ -1.9
DEPDC1B-201ENST00000265036 SPANXA2-OT1Q8N9U9 137 aa3.2□□□□□ -1.9
DEPDC1B-201ENST00000265036 Q1T7F1 81 aa3.19□□□□□ -1.9
DEPDC1B-201ENST00000265036 KRTAP19-6Q3LI70 58 aa3.19□□□□□ -1.9
DEPDC1B-201ENST00000265036 KRTAP19-8Q3LI54 63 aa3.18□□□□□ -1.9
DEPDC1B-201ENST00000265036 SPTSSBQ8NFR3 76 aa3.18□□□□□ -1.9
DEPDC1B-201ENST00000265036 A6NN06 94 aa3.18□□□□□ -1.9
DEPDC1B-201ENST00000265036 R4GN34 69 aa3.18□□□□□ -1.9
DEPDC1B-201ENST00000265036 CRIPTQ9P021 101 aa3.17□□□□□ -1.9
DEPDC1B-201ENST00000265036 M0QZ58 72 aa3.17□□□□□ -1.9
DEPDC1B-201ENST00000265036 LINC01554Q52M75 96 aa3.17□□□□□ -1.9
DEPDC1B-201ENST00000265036 COA5Q86WW8 74 aa3.17□□□□□ -1.9
DEPDC1B-201ENST00000265036 PRAC1Q96KF2 57 aa3.12□□□□□ -1.91
DEPDC1B-201ENST00000265036 KRTAP9-7A8MTY7 169 aa3.1□□□□□ -1.91
DEPDC1B-201ENST00000265036 KRTAP10-5P60370 271 aa3.09□□□□□ -1.92
DEPDC1B-201ENST00000265036 KMT2DO14686 5537 aa3.08□□□□□ -1.92
DEPDC1B-201ENST00000265036 A0A0A0MQY5 61 aa3.08□□□□□ -1.92
DEPDC1B-201ENST00000265036 KRTAP13-4Q3LI77 160 aa3.08□□□□□ -1.92
DEPDC1B-201ENST00000265036 PLAC4Q8WY50 150 aa3.07□□□□□ -1.92
DEPDC1B-201ENST00000265036 PRR15LQ9BU68 103 aa3.07□□□□□ -1.92
DEPDC1B-201ENST00000265036 A6NED7 52 aa3.06□□□□□ -1.92
DEPDC1B-201ENST00000265036 MT1XP80297 61 aa3.04□□□□□ -1.92
DEPDC1B-201ENST00000265036 CDC42SE1Q9NRR8 79 aa3.04□□□□□ -1.92
DEPDC1B-201ENST00000265036 A0A0D9SG42 100 aa3.02□□□□□ -1.93
DEPDC1B-201ENST00000265036 SPATA8Q6RVD6 105 aa3.02□□□□□ -1.93
DEPDC1B-201ENST00000265036 KRTAP4-11Q9BYQ6 195 aa3.02□□□□□ -1.93
DEPDC1B-201ENST00000265036 PRO2289Q9P1D8 64 aa3□□□□□ -1.93
DEPDC1B-201ENST00000265036 MUC12Q9UKN1 5478 aa3□□□□□ -1.93
DEPDC1B-201ENST00000265036 A0A1B0GU69 56 aa2.99□□□□□ -1.93
DEPDC1B-201ENST00000265036 A0A1B0GU33 70 aa2.98□□□□□ -1.93
DEPDC1B-201ENST00000265036 KRTAP6-3Q3LI67 103 aa2.95□□□□□ -1.94
DEPDC1B-201ENST00000265036 CAMK2N1Q7Z7J9 78 aa2.95□□□□□ -1.94
DEPDC1B-201ENST00000265036 SPINT4Q6UDR6 99 aa2.94□□□□□ -1.94
DEPDC1B-201ENST00000265036 MDN1Q9NU22 5596 aa2.94□□□□□ -1.94
DEPDC1B-201ENST00000265036 KRTAP10-7P60409 375 aaPredicted RBP2.94□□□□□ -1.94
DEPDC1B-201ENST00000265036 NEBP20929 6669 aa2.93□□□□□ -1.94
DEPDC1B-201ENST00000265036 KRTAP12-2P59991 146 aa2.91□□□□□ -1.94
DEPDC1B-201ENST00000265036 LINC01558Q9Y6Z2 57 aa2.91□□□□□ -1.94
DEPDC1B-201ENST00000265036 KRTAP12-1P59990 96 aa2.9□□□□□ -1.95
DEPDC1B-201ENST00000265036 ROMO1P60602 79 aa2.9□□□□□ -1.95
DEPDC1B-201ENST00000265036 KRTAP8-1Q8IUC2 63 aa2.88□□□□□ -1.95
DEPDC1B-201ENST00000265036 SPRR2FQ96RM1 72 aa2.88□□□□□ -1.95
DEPDC1B-201ENST00000265036 KRTAP5-9P26371 169 aa2.87□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 109.4 ms