RNA–Protein interactions for RNA: ENST00000262887.9

XRCC1-201, Transcript of X-ray repair cross complementing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene XRCC1, Length 2,802 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1-201ENST00000262887 KRTAP15-1Q3LI76 137 aa7.9□□□□□ -1.15
XRCC1-201ENST00000262887 TPRXLQ17RH7 258 aa7.88□□□□□ -1.15
XRCC1-201ENST00000262887 RPL37P61927 97 aaKnown RBP7.87□□□□□ -1.15
XRCC1-201ENST00000262887 APOBP04114 4563 aaKnown RBP7.86□□□□□ -1.15
XRCC1-201ENST00000262887 KIAA1109Q2LD37 5005 aa7.82□□□□□ -1.16
XRCC1-201ENST00000262887 SMR3BP02814 79 aaPredicted RBP7.8□□□□□ -1.16
XRCC1-201ENST00000262887 KRTAP10-6P60371 365 aaPredicted RBP7.79□□□□□ -1.16
XRCC1-201ENST00000262887 A0A0D9SG42 100 aa7.79□□□□□ -1.16
XRCC1-201ENST00000262887 KRTAP13-4Q3LI77 160 aa7.78□□□□□ -1.16
XRCC1-201ENST00000262887 LRP1Q07954 4544 aaKnown RBP7.77□□□□□ -1.17
XRCC1-201ENST00000262887 MYCBP2O75592 4640 aa7.75□□□□□ -1.17
XRCC1-201ENST00000262887 C10orf95Q9H7T3 257 aa7.74□□□□□ -1.17
XRCC1-201ENST00000262887 KRTAP3-3Q9BYR6 98 aa7.71□□□□□ -1.17
XRCC1-201ENST00000262887 PKHD1L1Q86WI1 4243 aa7.7□□□□□ -1.18
XRCC1-201ENST00000262887 KRTAP3-2Q9BYR7 98 aa7.7□□□□□ -1.18
XRCC1-201ENST00000262887 HSPG2P98160 4391 aa7.67□□□□□ -1.18
XRCC1-201ENST00000262887 DMBT1Q9UGM3 2413 aaPredicted RBP7.62□□□□□ -1.19
XRCC1-201ENST00000262887 S4R3F8 94 aa7.62□□□□□ -1.19
XRCC1-201ENST00000262887 KRTAP10-4P60372 401 aaPredicted RBP7.6□□□□□ -1.19
XRCC1-201ENST00000262887 KRTAP17-1Q9BYP8 105 aa7.58□□□□□ -1.2
XRCC1-201ENST00000262887 RYR1P21817 5038 aa7.57□□□□□ -1.2
XRCC1-201ENST00000262887 KRTAP12-2P59991 146 aa7.57□□□□□ -1.2
XRCC1-201ENST00000262887 FAT3Q8TDW7 4589 aa7.55□□□□□ -1.2
XRCC1-201ENST00000262887 KRTAP10-8P60410 259 aa7.54□□□□□ -1.2
XRCC1-201ENST00000262887 A0A1B0GVY2 172 aa7.54□□□□□ -1.2
XRCC1-201ENST00000262887 LUZP6Q538Z0 58 aa7.52□□□□□ -1.21
XRCC1-201ENST00000262887 KRTAP12-1P59990 96 aa7.48□□□□□ -1.21
XRCC1-201ENST00000262887 ABCA13Q86UQ4 5058 aa7.45□□□□□ -1.22
XRCC1-201ENST00000262887 XP32Q5T750 250 aa7.44□□□□□ -1.22
XRCC1-201ENST00000262887 TNXBP22105 4242 aa7.36□□□□□ -1.23
XRCC1-201ENST00000262887 M0QZ58 72 aa7.34□□□□□ -1.23
XRCC1-201ENST00000262887 KRTAP4-5Q9BYR2 181 aa7.32□□□□□ -1.24
XRCC1-201ENST00000262887 LPAP08519 4548 aa7.31□□□□□ -1.24
XRCC1-201ENST00000262887 Q5VSD8 79 aa7.3□□□□□ -1.24
XRCC1-201ENST00000262887 HERC2O95714 4834 aa7.29□□□□□ -1.24
XRCC1-201ENST00000262887 PCLOQ9Y6V0 5065 aa7.26□□□□□ -1.25
XRCC1-201ENST00000262887 HERC1Q15751 4861 aa7.23□□□□□ -1.25
XRCC1-201ENST00000262887 PLAC4Q8WY50 150 aa7.22□□□□□ -1.25
XRCC1-201ENST00000262887 LRP2P98164 4655 aa7.19□□□□□ -1.26
XRCC1-201ENST00000262887 BIRC6Q9NR09 4857 aa7.16□□□□□ -1.26
XRCC1-201ENST00000262887 MUC2Q02817 5179 aa7.13□□□□□ -1.27
XRCC1-201ENST00000262887 R4GN34 69 aa7.12□□□□□ -1.27
XRCC1-201ENST00000262887 SEC61BP60468 96 aaKnown RBP7.01□□□□□ -1.29
XRCC1-201ENST00000262887 MT1HL1P0DM35 61 aa7□□□□□ -1.29
XRCC1-201ENST00000262887 LORP23490 312 aaPredicted RBP6.93□□□□□ -1.3
XRCC1-201ENST00000262887 RNF213Q63HN8 5207 aa6.93□□□□□ -1.3
XRCC1-201ENST00000262887 PP632Q6XCG6 107 aa6.89□□□□□ -1.31
XRCC1-201ENST00000262887 UBR4Q5T4S7 5183 aa6.87□□□□□ -1.31
XRCC1-201ENST00000262887 CAMK2N1Q7Z7J9 78 aa6.81□□□□□ -1.32
XRCC1-201ENST00000262887 FAT4Q6V0I7 4981 aa6.8□□□□□ -1.32
XRCC1-201ENST00000262887 J3QL48 77 aa6.77□□□□□ -1.32
XRCC1-201ENST00000262887 HMCN2Q8NDA2 5059 aa6.77□□□□□ -1.33
XRCC1-201ENST00000262887 MUC17Q685J3 4493 aa6.7□□□□□ -1.34
XRCC1-201ENST00000262887 KRTAP4-1Q9BYQ7 146 aa6.64□□□□□ -1.35
XRCC1-201ENST00000262887 SPRR5A0A1B0GTR4 108 aa6.61□□□□□ -1.35
XRCC1-201ENST00000262887 PRO2289Q9P1D8 64 aa6.59□□□□□ -1.35
XRCC1-201ENST00000262887 TNP1P09430 55 aa6.57□□□□□ -1.36
XRCC1-201ENST00000262887 KRTAP23-1A1A580 65 aa6.55□□□□□ -1.36
XRCC1-201ENST00000262887 KRTAP19-2Q3LHN2 52 aa6.54□□□□□ -1.36
XRCC1-201ENST00000262887 INE1O15225 51 aa6.36□□□□□ -1.39
XRCC1-201ENST00000262887 FLGP20930 4061 aaPredicted RBP6.32□□□□□ -1.4
XRCC1-201ENST00000262887 LCE2DQ5TA82 110 aaPredicted RBP6.24□□□□□ -1.41
XRCC1-201ENST00000262887 LCE3AQ5TA76 89 aa6.18□□□□□ -1.42
XRCC1-201ENST00000262887 SPRR2GQ9BYE4 73 aa6.16□□□□□ -1.42
XRCC1-201ENST00000262887 KRTAP19-1Q8IUB9 90 aa6.11□□□□□ -1.43
XRCC1-201ENST00000262887 USH2AO75445 5202 aa6.06□□□□□ -1.44
XRCC1-201ENST00000262887 FSIP2Q5CZC0 6907 aa6.04□□□□□ -1.44
XRCC1-201ENST00000262887 LCE2CQ5TA81 110 aa6.03□□□□□ -1.44
XRCC1-201ENST00000262887 KRTAP8-1Q8IUC2 63 aa6□□□□□ -1.45
XRCC1-201ENST00000262887 M0R2T5 61 aa5.98□□□□□ -1.45
XRCC1-201ENST00000262887 MT1HP80294 61 aa5.9□□□□□ -1.46
XRCC1-201ENST00000262887 KRTAP10-10P60014 251 aa5.89□□□□□ -1.47
XRCC1-201ENST00000262887 MT1FP04733 61 aa5.87□□□□□ -1.47
XRCC1-201ENST00000262887 KRTAP12-3P60328 96 aa5.86□□□□□ -1.47
XRCC1-201ENST00000262887 MT2AP02795 61 aa5.84□□□□□ -1.47
XRCC1-201ENST00000262887 KRTAP10-12P60413 245 aa5.82□□□□□ -1.48
XRCC1-201ENST00000262887 KRTAP10-5P60370 271 aa5.81□□□□□ -1.48
XRCC1-201ENST00000262887 KRTAP19-8Q3LI54 63 aa5.8□□□□□ -1.48
XRCC1-201ENST00000262887 MT1XP80297 61 aa5.79□□□□□ -1.48
XRCC1-201ENST00000262887 KRTAP9-8Q9BYQ0 159 aa5.75□□□□□ -1.49
XRCC1-201ENST00000262887 MT1BP07438 61 aa5.74□□□□□ -1.49
XRCC1-201ENST00000262887 KRTAP10-7P60409 375 aaPredicted RBP5.68□□□□□ -1.5
XRCC1-201ENST00000262887 KMT2DO14686 5537 aa5.66□□□□□ -1.5
XRCC1-201ENST00000262887 LCE3CQ5T5A8 94 aa5.54□□□□□ -1.52
XRCC1-201ENST00000262887 LCE2AQ5TA79 106 aaPredicted RBP5.5□□□□□ -1.53
XRCC1-201ENST00000262887 KRTAP19-5Q3LI72 72 aa5.5□□□□□ -1.53
XRCC1-201ENST00000262887 SSPOA2VEC9 5147 aa5.49□□□□□ -1.53
XRCC1-201ENST00000262887 KRTAP9-3Q9BYQ3 159 aa5.48□□□□□ -1.53
XRCC1-201ENST00000262887 LCE2BO14633 110 aa5.42□□□□□ -1.54
XRCC1-201ENST00000262887 KRTAP9-6A8MVA2 160 aa5.37□□□□□ -1.55
XRCC1-201ENST00000262887 KRTAP2-3P0C7H8 128 aa5.32□□□□□ -1.56
XRCC1-201ENST00000262887 KRTAP2-4Q9BYR9 128 aa5.32□□□□□ -1.56
XRCC1-201ENST00000262887 KRTAP2-1Q9BYU5 128 aa5.32□□□□□ -1.56
XRCC1-201ENST00000262887 KRTAP4-8A0A0G2JLE6 195 aa5.26□□□□□ -1.57
XRCC1-201ENST00000262887 KRTAP4-8Q9BYQ9 185 aa5.26□□□□□ -1.57
XRCC1-201ENST00000262887 KRTAP4-7Q9BYR0 210 aa5.19□□□□□ -1.58
XRCC1-201ENST00000262887 KRTAP19-7Q3SYF9 63 aa5.15□□□□□ -1.58
XRCC1-201ENST00000262887 FCGBPQ9Y6R7 5405 aaPredicted RBP5.14□□□□□ -1.59
XRCC1-201ENST00000262887 SYNE2Q8WXH0 6885 aaKnown RBP5.13□□□□□ -1.59
XRCC1-201ENST00000262887 MACF1Q9UPN3 7388 aaKnown RBP5.12□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 8.8 ms