RNA–Protein interactions for RNA: ENST00000262124.15

SEH1L-201, Transcript of SEH1 like nucleoporin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEH1L, Length 3,494 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEH1L-201ENST00000262124 HERC2O95714 4834 aa6.35□□□□□ -1.39
SEH1L-201ENST00000262124 RPL37P61927 97 aaKnown RBP6.34□□□□□ -1.39
SEH1L-201ENST00000262124 MUC2Q02817 5179 aa6.33□□□□□ -1.4
SEH1L-201ENST00000262124 COX6B2Q6YFQ2 88 aa6.33□□□□□ -1.4
SEH1L-201ENST00000262124 MIR22HGQ0VDD5 57 aa6.31□□□□□ -1.4
SEH1L-201ENST00000262124 UQCR11O14957 56 aa6.31□□□□□ -1.4
SEH1L-201ENST00000262124 SPATA8Q6RVD6 105 aa6.3□□□□□ -1.4
SEH1L-201ENST00000262124 A0A0D9SG42 100 aa6.23□□□□□ -1.41
SEH1L-201ENST00000262124 HERC1Q15751 4861 aa6.21□□□□□ -1.41
SEH1L-201ENST00000262124 A0A1B0GU33 70 aa6.21□□□□□ -1.42
SEH1L-201ENST00000262124 ADM2Q7Z4H4 148 aa6.2□□□□□ -1.42
SEH1L-201ENST00000262124 PRAC1Q96KF2 57 aa6.2□□□□□ -1.42
SEH1L-201ENST00000262124 S4R3F8 94 aa6.19□□□□□ -1.42
SEH1L-201ENST00000262124 H0YAA0 97 aa6.16□□□□□ -1.42
SEH1L-201ENST00000262124 A6NN06 94 aa6.16□□□□□ -1.42
SEH1L-201ENST00000262124 PCLOQ9Y6V0 5065 aa6.14□□□□□ -1.43
SEH1L-201ENST00000262124 TPRXLQ17RH7 258 aa6.13□□□□□ -1.43
SEH1L-201ENST00000262124 KRTAP3-3Q9BYR6 98 aa6.13□□□□□ -1.43
SEH1L-201ENST00000262124 H1FX-AS1Q4G0G2 97 aa6.12□□□□□ -1.43
SEH1L-201ENST00000262124 P0C880 135 aa6.11□□□□□ -1.43
SEH1L-201ENST00000262124 RBM12B-AS1Q9P1G2 102 aa6.11□□□□□ -1.43
SEH1L-201ENST00000262124 CRIPTQ9P021 101 aa6.11□□□□□ -1.43
SEH1L-201ENST00000262124 KTN1-AS1Q86SY8 53 aa6.09□□□□□ -1.43
SEH1L-201ENST00000262124 LINC01554Q52M75 96 aa6.07□□□□□ -1.44
SEH1L-201ENST00000262124 RNF213Q63HN8 5207 aa6.06□□□□□ -1.44
SEH1L-201ENST00000262124 BIRC6Q9NR09 4857 aa6.05□□□□□ -1.44
SEH1L-201ENST00000262124 KRTAP13-4Q3LI77 160 aa6.04□□□□□ -1.44
SEH1L-201ENST00000262124 KRTAP4-1Q9BYQ7 146 aa6.04□□□□□ -1.44
SEH1L-201ENST00000262124 KRTAP10-6P60371 365 aaPredicted RBP6.02□□□□□ -1.45
SEH1L-201ENST00000262124 CSAG1Q6PB30 78 aa6.01□□□□□ -1.45
SEH1L-201ENST00000262124 SEC61BP60468 96 aaKnown RBP6.01□□□□□ -1.45
SEH1L-201ENST00000262124 FAT4Q6V0I7 4981 aa5.99□□□□□ -1.45
SEH1L-201ENST00000262124 SPINT4Q6UDR6 99 aa5.99□□□□□ -1.45
SEH1L-201ENST00000262124 KRTAP3-2Q9BYR7 98 aa5.97□□□□□ -1.45
SEH1L-201ENST00000262124 K7ERS5 55 aa5.94□□□□□ -1.46
SEH1L-201ENST00000262124 UBR4Q5T4S7 5183 aa5.92□□□□□ -1.46
SEH1L-201ENST00000262124 M0QZ58 72 aa5.87□□□□□ -1.47
SEH1L-201ENST00000262124 MUC17Q685J3 4493 aa5.87□□□□□ -1.47
SEH1L-201ENST00000262124 R4GN34 69 aa5.85□□□□□ -1.47
SEH1L-201ENST00000262124 LORP23490 312 aaPredicted RBP5.84□□□□□ -1.47
SEH1L-201ENST00000262124 KRTAP12-2P59991 146 aa5.83□□□□□ -1.48
SEH1L-201ENST00000262124 HMCN2Q8NDA2 5059 aa5.81□□□□□ -1.48
SEH1L-201ENST00000262124 C10orf95Q9H7T3 257 aa5.78□□□□□ -1.48
SEH1L-201ENST00000262124 M0R2T5 61 aa5.75□□□□□ -1.49
SEH1L-201ENST00000262124 KRTAP12-1P59990 96 aa5.72□□□□□ -1.49
SEH1L-201ENST00000262124 ROMO1P60602 79 aa5.71□□□□□ -1.49
SEH1L-201ENST00000262124 KRTAP25-1Q3LHN0 102 aa5.65□□□□□ -1.51
SEH1L-201ENST00000262124 KRTAP19-2Q3LHN2 52 aa5.65□□□□□ -1.51
SEH1L-201ENST00000262124 FLGP20930 4061 aaPredicted RBP5.62□□□□□ -1.51
SEH1L-201ENST00000262124 CAMK2N1Q7Z7J9 78 aa5.59□□□□□ -1.51
SEH1L-201ENST00000262124 LCE2CQ5TA81 110 aa5.49□□□□□ -1.53
SEH1L-201ENST00000262124 KRTAP10-10P60014 251 aa5.45□□□□□ -1.54
SEH1L-201ENST00000262124 MT1HP80294 61 aa5.42□□□□□ -1.54
SEH1L-201ENST00000262124 USH2AO75445 5202 aa5.35□□□□□ -1.55
SEH1L-201ENST00000262124 FSIP2Q5CZC0 6907 aa5.32□□□□□ -1.56
SEH1L-201ENST00000262124 MT1FP04733 61 aa5.32□□□□□ -1.56
SEH1L-201ENST00000262124 PLAC4Q8WY50 150 aa5.3□□□□□ -1.56
SEH1L-201ENST00000262124 MT2AP02795 61 aa5.29□□□□□ -1.56
SEH1L-201ENST00000262124 KRTAP19-1Q8IUB9 90 aa5.27□□□□□ -1.57
SEH1L-201ENST00000262124 KRTAP9-8Q9BYQ0 159 aa5.22□□□□□ -1.57
SEH1L-201ENST00000262124 TNP1P09430 55 aa5.18□□□□□ -1.58
SEH1L-201ENST00000262124 SPRR2GQ9BYE4 73 aa5.16□□□□□ -1.58
SEH1L-201ENST00000262124 KMT2DO14686 5537 aa5.11□□□□□ -1.59
SEH1L-201ENST00000262124 NDUFAF8A1L188 74 aa5.1□□□□□ -1.59
SEH1L-201ENST00000262124 KRTAP15-1Q3LI76 137 aa5.03□□□□□ -1.6
SEH1L-201ENST00000262124 H3BS24 57 aa5.02□□□□□ -1.61
SEH1L-201ENST00000262124 MT1BP07438 61 aa5.01□□□□□ -1.61
SEH1L-201ENST00000262124 LCE3AQ5TA76 89 aa4.99□□□□□ -1.61
SEH1L-201ENST00000262124 KRTAP9-3Q9BYQ3 159 aa4.99□□□□□ -1.61
SEH1L-201ENST00000262124 PP632Q6XCG6 107 aa4.96□□□□□ -1.62
SEH1L-201ENST00000262124 LCE2BO14633 110 aa4.93□□□□□ -1.62
SEH1L-201ENST00000262124 MT1XP80297 61 aa4.93□□□□□ -1.62
SEH1L-201ENST00000262124 KRTAP10-5P60370 271 aa4.93□□□□□ -1.62
SEH1L-201ENST00000262124 KRTAP19-8Q3LI54 63 aa4.91□□□□□ -1.62
SEH1L-201ENST00000262124 KRTAP10-7P60409 375 aaPredicted RBP4.9□□□□□ -1.63
SEH1L-201ENST00000262124 LCE2AQ5TA79 106 aaPredicted RBP4.85□□□□□ -1.63
SEH1L-201ENST00000262124 LUZP6Q538Z0 58 aa4.83□□□□□ -1.64
SEH1L-201ENST00000262124 KRTAP10-12P60413 245 aa4.83□□□□□ -1.64
SEH1L-201ENST00000262124 LCE2DQ5TA82 110 aaPredicted RBP4.82□□□□□ -1.64
SEH1L-201ENST00000262124 PRO2289Q9P1D8 64 aa4.78□□□□□ -1.64
SEH1L-201ENST00000262124 KRTAP4-8A0A0G2JLE6 195 aa4.78□□□□□ -1.64
SEH1L-201ENST00000262124 KRTAP4-8Q9BYQ9 185 aa4.78□□□□□ -1.64
SEH1L-201ENST00000262124 SSPOA2VEC9 5147 aa4.75□□□□□ -1.65
SEH1L-201ENST00000262124 KRTAP12-3P60328 96 aa4.73□□□□□ -1.65
SEH1L-201ENST00000262124 KRTAP23-1A1A580 65 aa4.65□□□□□ -1.67
SEH1L-201ENST00000262124 KRTAP8-1Q8IUC2 63 aa4.65□□□□□ -1.67
SEH1L-201ENST00000262124 KRTAP19-5Q3LI72 72 aa4.64□□□□□ -1.67
SEH1L-201ENST00000262124 DSTQ03001 7570 aaKnown RBP4.61□□□□□ -1.67
SEH1L-201ENST00000262124 MUC12Q9UKN1 5478 aa4.57□□□□□ -1.68
SEH1L-201ENST00000262124 FCGBPQ9Y6R7 5405 aaPredicted RBP4.54□□□□□ -1.68
SEH1L-201ENST00000262124 KRTAP4-7Q9BYR0 210 aa4.52□□□□□ -1.69
SEH1L-201ENST00000262124 LOC100996750A0A140TA64 210 aa4.51□□□□□ -1.69
SEH1L-201ENST00000262124 KRTAP4-6Q9BYQ5 205 aa4.51□□□□□ -1.69
SEH1L-201ENST00000262124 SPRR5A0A1B0GTR4 108 aa4.45□□□□□ -1.7
SEH1L-201ENST00000262124 SYNE2Q8WXH0 6885 aaKnown RBP4.4□□□□□ -1.7
SEH1L-201ENST00000262124 MACF1Q9UPN3 7388 aaKnown RBP4.4□□□□□ -1.71
SEH1L-201ENST00000262124 KRTAP19-7Q3SYF9 63 aa4.39□□□□□ -1.71
SEH1L-201ENST00000262124 LCE3CQ5T5A8 94 aa4.36□□□□□ -1.71
SEH1L-201ENST00000262124 A0A0A0MQY5 61 aa4.35□□□□□ -1.71
SEH1L-201ENST00000262124 CRCT1Q9UGL9 99 aa4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms