RNA–Protein interactions for RNA: ENST00000261302.9

FOXN3-201, Transcript of forkhead box N3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene FOXN3, Length 2,542 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-201ENST00000261302 RYR1P21817 5038 aa6.85□□□□□ -1.31
FOXN3-201ENST00000261302 HSPG2P98160 4391 aa6.83□□□□□ -1.32
FOXN3-201ENST00000261302 RPL37P61927 97 aaKnown RBP6.81□□□□□ -1.32
FOXN3-201ENST00000261302 KRTAP3-1Q9BYR8 98 aa6.79□□□□□ -1.32
FOXN3-201ENST00000261302 KRTAP13-2Q52LG2 175 aa6.78□□□□□ -1.32
FOXN3-201ENST00000261302 KRTAP17-1Q9BYP8 105 aa6.77□□□□□ -1.33
FOXN3-201ENST00000261302 C10orf95Q9H7T3 257 aa6.76□□□□□ -1.33
FOXN3-201ENST00000261302 SMR3BP02814 79 aaPredicted RBP6.71□□□□□ -1.34
FOXN3-201ENST00000261302 KRTAP4-5Q9BYR2 181 aa6.71□□□□□ -1.34
FOXN3-201ENST00000261302 Q5VSD8 79 aa6.7□□□□□ -1.34
FOXN3-201ENST00000261302 FAT1Q14517 4588 aa6.69□□□□□ -1.34
FOXN3-201ENST00000261302 LUZP6Q538Z0 58 aa6.67□□□□□ -1.34
FOXN3-201ENST00000261302 ABCA13Q86UQ4 5058 aa6.65□□□□□ -1.34
FOXN3-201ENST00000261302 VPS13BQ7Z7G8 4022 aa6.65□□□□□ -1.34
FOXN3-201ENST00000261302 KRTAP10-4P60372 401 aaPredicted RBP6.64□□□□□ -1.35
FOXN3-201ENST00000261302 KRTAP13-4Q3LI77 160 aa6.64□□□□□ -1.35
FOXN3-201ENST00000261302 PCLOQ9Y6V0 5065 aa6.63□□□□□ -1.35
FOXN3-201ENST00000261302 KRTAP10-6P60371 365 aaPredicted RBP6.63□□□□□ -1.35
FOXN3-201ENST00000261302 A0A0D9SG42 100 aa6.6□□□□□ -1.35
FOXN3-201ENST00000261302 KRTAP1-4P0C5Y4 121 aa6.57□□□□□ -1.36
FOXN3-201ENST00000261302 PKHD1L1Q86WI1 4243 aa6.55□□□□□ -1.36
FOXN3-201ENST00000261302 S4R3F8 94 aa6.55□□□□□ -1.36
FOXN3-201ENST00000261302 KRTAP3-2Q9BYR7 98 aa6.52□□□□□ -1.37
FOXN3-201ENST00000261302 XP32Q5T750 250 aa6.52□□□□□ -1.37
FOXN3-201ENST00000261302 KRTAP12-2P59991 146 aa6.48□□□□□ -1.37
FOXN3-201ENST00000261302 RPS29P62273 56 aaKnown RBP6.48□□□□□ -1.37
FOXN3-201ENST00000261302 MYCBP2O75592 4640 aa6.47□□□□□ -1.37
FOXN3-201ENST00000261302 KRTAP3-3Q9BYR6 98 aa6.46□□□□□ -1.37
FOXN3-201ENST00000261302 FAT3Q8TDW7 4589 aa6.45□□□□□ -1.38
FOXN3-201ENST00000261302 DMBT1Q9UGM3 2413 aaPredicted RBP6.43□□□□□ -1.38
FOXN3-201ENST00000261302 LRP1Q07954 4544 aaKnown RBP6.42□□□□□ -1.38
FOXN3-201ENST00000261302 C9orf92A6NGG3 77 aa6.41□□□□□ -1.38
FOXN3-201ENST00000261302 J3QL48 77 aa6.41□□□□□ -1.38
FOXN3-201ENST00000261302 KRTAP12-1P59990 96 aa6.4□□□□□ -1.38
FOXN3-201ENST00000261302 MT1HL1P0DM35 61 aa6.38□□□□□ -1.39
FOXN3-201ENST00000261302 KRTAP10-8P60410 259 aa6.34□□□□□ -1.39
FOXN3-201ENST00000261302 PLAC4Q8WY50 150 aa6.34□□□□□ -1.39
FOXN3-201ENST00000261302 TNXBP22105 4242 aa6.33□□□□□ -1.4
FOXN3-201ENST00000261302 HERC1Q15751 4861 aa6.32□□□□□ -1.4
FOXN3-201ENST00000261302 SEC61BP60468 96 aaKnown RBP6.3□□□□□ -1.4
FOXN3-201ENST00000261302 M0QZ58 72 aa6.2□□□□□ -1.42
FOXN3-201ENST00000261302 HMCN2Q8NDA2 5059 aa6.19□□□□□ -1.42
FOXN3-201ENST00000261302 PP632Q6XCG6 107 aa5.99□□□□□ -1.45
FOXN3-201ENST00000261302 LPAP08519 4548 aa5.99□□□□□ -1.45
FOXN3-201ENST00000261302 LRP2P98164 4655 aa5.99□□□□□ -1.45
FOXN3-201ENST00000261302 CAMK2N1Q7Z7J9 78 aa5.98□□□□□ -1.45
FOXN3-201ENST00000261302 UBR4Q5T4S7 5183 aa5.95□□□□□ -1.46
FOXN3-201ENST00000261302 PRO2289Q9P1D8 64 aa5.88□□□□□ -1.47
FOXN3-201ENST00000261302 SPRR5A0A1B0GTR4 108 aa5.87□□□□□ -1.47
FOXN3-201ENST00000261302 R4GN34 69 aa5.85□□□□□ -1.47
FOXN3-201ENST00000261302 MUC17Q685J3 4493 aa5.84□□□□□ -1.48
FOXN3-201ENST00000261302 RNF213Q63HN8 5207 aa5.8□□□□□ -1.48
FOXN3-201ENST00000261302 MUC2Q02817 5179 aa5.7□□□□□ -1.5
FOXN3-201ENST00000261302 INE1O15225 51 aa5.68□□□□□ -1.5
FOXN3-201ENST00000261302 KRTAP23-1A1A580 65 aa5.67□□□□□ -1.5
FOXN3-201ENST00000261302 LORP23490 312 aaPredicted RBP5.66□□□□□ -1.5
FOXN3-201ENST00000261302 KRTAP4-1Q9BYQ7 146 aa5.66□□□□□ -1.5
FOXN3-201ENST00000261302 FAT4Q6V0I7 4981 aa5.56□□□□□ -1.52
FOXN3-201ENST00000261302 TNP1P09430 55 aa5.53□□□□□ -1.52
FOXN3-201ENST00000261302 LCE2AQ5TA79 106 aaPredicted RBP5.53□□□□□ -1.52
FOXN3-201ENST00000261302 KRTAP19-2Q3LHN2 52 aa5.52□□□□□ -1.53
FOXN3-201ENST00000261302 LCE2CQ5TA81 110 aa5.49□□□□□ -1.53
FOXN3-201ENST00000261302 MT1HP80294 61 aa5.41□□□□□ -1.54
FOXN3-201ENST00000261302 FLGP20930 4061 aaPredicted RBP5.33□□□□□ -1.56
FOXN3-201ENST00000261302 M0R2T5 61 aa5.29□□□□□ -1.56
FOXN3-201ENST00000261302 KRTAP9-2Q9BYQ4 174 aa5.21□□□□□ -1.58
FOXN3-201ENST00000261302 LCE2DQ5TA82 110 aaPredicted RBP5.2□□□□□ -1.58
FOXN3-201ENST00000261302 KRTAP9-8Q9BYQ0 159 aa5.15□□□□□ -1.58
FOXN3-201ENST00000261302 LCE3AQ5TA76 89 aa5.15□□□□□ -1.59
FOXN3-201ENST00000261302 MT2AP02795 61 aa5.08□□□□□ -1.6
FOXN3-201ENST00000261302 KRTAP8-1Q8IUC2 63 aa5.07□□□□□ -1.6
FOXN3-201ENST00000261302 MT1FP04733 61 aa5.04□□□□□ -1.6
FOXN3-201ENST00000261302 KRTAP10-10P60014 251 aa5□□□□□ -1.61
FOXN3-201ENST00000261302 KRTAP9-6A0A140TA67 174 aa4.98□□□□□ -1.61
FOXN3-201ENST00000261302 KRTAP10-12P60413 245 aa4.98□□□□□ -1.61
FOXN3-201ENST00000261302 KRTAP9-3Q9BYQ3 159 aa4.98□□□□□ -1.61
FOXN3-201ENST00000261302 CRCT1Q9UGL9 99 aa4.96□□□□□ -1.62
FOXN3-201ENST00000261302 SPRR2GQ9BYE4 73 aa4.93□□□□□ -1.62
FOXN3-201ENST00000261302 LCE2BO14633 110 aa4.91□□□□□ -1.62
FOXN3-201ENST00000261302 KRTAP12-3P60328 96 aa4.88□□□□□ -1.63
FOXN3-201ENST00000261302 FSIP2Q5CZC0 6907 aa4.88□□□□□ -1.63
FOXN3-201ENST00000261302 USH2AO75445 5202 aa4.87□□□□□ -1.63
FOXN3-201ENST00000261302 KRTAP19-1Q8IUB9 90 aa4.85□□□□□ -1.63
FOXN3-201ENST00000261302 SSPOA2VEC9 5147 aa4.79□□□□□ -1.64
FOXN3-201ENST00000261302 KRTAP10-5P60370 271 aa4.79□□□□□ -1.64
FOXN3-201ENST00000261302 KRTAP19-6Q3LI70 58 aa4.73□□□□□ -1.65
FOXN3-201ENST00000261302 KRTAP19-8Q3LI54 63 aa4.72□□□□□ -1.65
FOXN3-201ENST00000261302 MT1BP07438 61 aa4.68□□□□□ -1.66
FOXN3-201ENST00000261302 FCGBPQ9Y6R7 5405 aaPredicted RBP4.65□□□□□ -1.67
FOXN3-201ENST00000261302 KRTAP2-3P0C7H8 128 aa4.65□□□□□ -1.67
FOXN3-201ENST00000261302 LCE3CQ5T5A8 94 aa4.65□□□□□ -1.67
FOXN3-201ENST00000261302 KRTAP2-4Q9BYR9 128 aa4.65□□□□□ -1.67
FOXN3-201ENST00000261302 KRTAP2-1Q9BYU5 128 aa4.65□□□□□ -1.67
FOXN3-201ENST00000261302 MT1XP80297 61 aa4.63□□□□□ -1.67
FOXN3-201ENST00000261302 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.62□□□□□ -1.67
FOXN3-201ENST00000261302 KRTAP9-6A8MVA2 160 aa4.53□□□□□ -1.68
FOXN3-201ENST00000261302 KRTAP10-7P60409 375 aaPredicted RBP4.53□□□□□ -1.68
FOXN3-201ENST00000261302 KRTAP9-7A8MTY7 169 aa4.49□□□□□ -1.69
FOXN3-201ENST00000261302 MACF1Q9UPN3 7388 aaKnown RBP4.46□□□□□ -1.7
FOXN3-201ENST00000261302 KRTAP19-5Q3LI72 72 aa4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 6.9 ms