RNA–Protein interactions for RNA: ENST00000260810.9

TOPBP1-201, Transcript of DNA topoisomerase II binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOPBP1, Length 5,378 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-201ENST00000260810 CDC42SE1Q9NRR8 79 aa3.18□□□□□ -1.9
TOPBP1-201ENST00000260810 A0A1W2PNM2 257 aa3.17□□□□□ -1.9
TOPBP1-201ENST00000260810 A0A087WVE0 104 aa3.17□□□□□ -1.9
TOPBP1-201ENST00000260810 MIR22HGQ0VDD5 57 aa3.16□□□□□ -1.9
TOPBP1-201ENST00000260810 IGLV7-46A0A075B6I9 117 aa3.16□□□□□ -1.9
TOPBP1-201ENST00000260810 KRTAP3-1Q9BYR8 98 aa3.15□□□□□ -1.9
TOPBP1-201ENST00000260810 DSCR10P59022 87 aa3.14□□□□□ -1.91
TOPBP1-201ENST00000260810 DMAC1Q96GE9 116 aa3.14□□□□□ -1.91
TOPBP1-201ENST00000260810 CSAG1Q6PB30 78 aa3.14□□□□□ -1.91
TOPBP1-201ENST00000260810 LOC100996750A0A140TA64 210 aa3.13□□□□□ -1.91
TOPBP1-201ENST00000260810 ZCCHC13Q8WW36 166 aaKnown RBP3.13□□□□□ -1.91
TOPBP1-201ENST00000260810 KRTAP4-6Q9BYQ5 205 aa3.13□□□□□ -1.91
TOPBP1-201ENST00000260810 PSPHP1O15172 72 aa3.12□□□□□ -1.91
TOPBP1-201ENST00000260810 DEFB116Q30KQ4 102 aa3.12□□□□□ -1.91
TOPBP1-201ENST00000260810 SMR3BP02814 79 aaPredicted RBP3.12□□□□□ -1.91
TOPBP1-201ENST00000260810 S4R3F8 94 aa3.1□□□□□ -1.91
TOPBP1-201ENST00000260810 SPINT4Q6UDR6 99 aa3.1□□□□□ -1.91
TOPBP1-201ENST00000260810 LUZP6Q538Z0 58 aa3.09□□□□□ -1.92
TOPBP1-201ENST00000260810 Q1T7F1 81 aa3.09□□□□□ -1.92
TOPBP1-201ENST00000260810 Q5XG85 94 aa3.08□□□□□ -1.92
TOPBP1-201ENST00000260810 C4orf26Q17RF5 130 aa3.08□□□□□ -1.92
TOPBP1-201ENST00000260810 H7BZZ5 65 aa3.07□□□□□ -1.92
TOPBP1-201ENST00000260810 LCA10Q71F78 164 aa3.07□□□□□ -1.92
TOPBP1-201ENST00000260810 KRTAP29-1A8MX34 341 aaPredicted RBP3.06□□□□□ -1.92
TOPBP1-201ENST00000260810 Q5VSD8 79 aa3.06□□□□□ -1.92
TOPBP1-201ENST00000260810 LINC00472Q9H8W2 130 aa3.06□□□□□ -1.92
TOPBP1-201ENST00000260810 Q75L30 129 aa3.06□□□□□ -1.92
TOPBP1-201ENST00000260810 KTN1-AS1Q86SY8 53 aa3.05□□□□□ -1.92
TOPBP1-201ENST00000260810 MACF1Q9UPN3 7388 aaKnown RBP3.05□□□□□ -1.92
TOPBP1-201ENST00000260810 C9orf92A6NGG3 77 aa3.05□□□□□ -1.92
TOPBP1-201ENST00000260810 LINC01558Q9Y6Z2 57 aa3.05□□□□□ -1.92
TOPBP1-201ENST00000260810 PRR26Q8N8Z3 221 aa3.04□□□□□ -1.92
TOPBP1-201ENST00000260810 A0A1B0GU33 70 aa3.04□□□□□ -1.92
TOPBP1-201ENST00000260810 CAMK2N1Q7Z7J9 78 aa3.04□□□□□ -1.92
TOPBP1-201ENST00000260810 Q5W150 140 aa3.04□□□□□ -1.92
TOPBP1-201ENST00000260810 H3BS24 57 aa3.03□□□□□ -1.92
TOPBP1-201ENST00000260810 OCR1Q9BZK8 76 aa3.03□□□□□ -1.92
TOPBP1-201ENST00000260810 M0R2T5 61 aa3.02□□□□□ -1.93
TOPBP1-201ENST00000260810 MMP24-AS1A0A0U1RRL7 71 aa3.02□□□□□ -1.93
TOPBP1-201ENST00000260810 PLAC4Q8WY50 150 aa3.01□□□□□ -1.93
TOPBP1-201ENST00000260810 KRTAP9-8Q9BYQ0 159 aa3.01□□□□□ -1.93
TOPBP1-201ENST00000260810 LINC01554Q52M75 96 aa2.99□□□□□ -1.93
TOPBP1-201ENST00000260810 DSTQ03001 7570 aaKnown RBP2.98□□□□□ -1.93
TOPBP1-201ENST00000260810 M0QZ58 72 aa2.97□□□□□ -1.93
TOPBP1-201ENST00000260810 R4GN34 69 aa2.97□□□□□ -1.93
TOPBP1-201ENST00000260810 A0A0A0MQY5 61 aa2.96□□□□□ -1.94
TOPBP1-201ENST00000260810 H1FX-AS1Q4G0G2 97 aa2.96□□□□□ -1.94
TOPBP1-201ENST00000260810 SPINK7P58062 85 aa2.95□□□□□ -1.94
TOPBP1-201ENST00000260810 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.95□□□□□ -1.94
TOPBP1-201ENST00000260810 RPL37P61927 97 aaKnown RBP2.95□□□□□ -1.94
TOPBP1-201ENST00000260810 ROMO1P60602 79 aa2.93□□□□□ -1.94
TOPBP1-201ENST00000260810 SYNE2Q8WXH0 6885 aaKnown RBP2.92□□□□□ -1.94
TOPBP1-201ENST00000260810 Q8N9P0 234 aaPredicted RBP2.88□□□□□ -1.95
TOPBP1-201ENST00000260810 PP632Q6XCG6 107 aa2.88□□□□□ -1.95
TOPBP1-201ENST00000260810 A0A0D9SG42 100 aa2.87□□□□□ -1.95
TOPBP1-201ENST00000260810 KRTAP19-1Q8IUB9 90 aa2.87□□□□□ -1.95
TOPBP1-201ENST00000260810 KRTAP9-2Q9BYQ4 174 aa2.87□□□□□ -1.95
TOPBP1-201ENST00000260810 MT1HP80294 61 aa2.87□□□□□ -1.95
TOPBP1-201ENST00000260810 XP32Q5T750 250 aa2.86□□□□□ -1.95
TOPBP1-201ENST00000260810 KRTAP4-8Q9BYQ9 185 aa2.84□□□□□ -1.95
TOPBP1-201ENST00000260810 KRTAP9-6A0A140TA67 174 aa2.84□□□□□ -1.96
TOPBP1-201ENST00000260810 A8MUU9 505 aa2.83□□□□□ -1.96
TOPBP1-201ENST00000260810 C20orf166-AS1Q96NR2 134 aa2.83□□□□□ -1.96
TOPBP1-201ENST00000260810 SPATA8Q6RVD6 105 aa2.83□□□□□ -1.96
TOPBP1-201ENST00000260810 KRTAP9-3Q9BYQ3 159 aa2.83□□□□□ -1.96
TOPBP1-201ENST00000260810 TPRXLQ17RH7 258 aa2.82□□□□□ -1.96
TOPBP1-201ENST00000260810 ADM2Q7Z4H4 148 aa2.82□□□□□ -1.96
TOPBP1-201ENST00000260810 A8MU10 97 aa2.82□□□□□ -1.96
TOPBP1-201ENST00000260810 MT1FP04733 61 aa2.82□□□□□ -1.96
TOPBP1-201ENST00000260810 PRO2289Q9P1D8 64 aa2.8□□□□□ -1.96
TOPBP1-201ENST00000260810 TNP1P09430 55 aa2.8□□□□□ -1.96
TOPBP1-201ENST00000260810 Q5VV11 94 aa2.8□□□□□ -1.96
TOPBP1-201ENST00000260810 KRTAP13-4Q3LI77 160 aa2.79□□□□□ -1.96
TOPBP1-201ENST00000260810 KRTAP10-6P60371 365 aaPredicted RBP2.78□□□□□ -1.96
TOPBP1-201ENST00000260810 KRTAP4-12Q9BQ66 201 aa2.76□□□□□ -1.97
TOPBP1-201ENST00000260810 KRTAP9-9Q9BYP9 154 aa2.76□□□□□ -1.97
TOPBP1-201ENST00000260810 KRTAP9-4Q9BYQ2 154 aa2.76□□□□□ -1.97
TOPBP1-201ENST00000260810 KRTAP25-1Q3LHN0 102 aa2.74□□□□□ -1.97
TOPBP1-201ENST00000260810 MT1BP07438 61 aa2.73□□□□□ -1.97
TOPBP1-201ENST00000260810 MT2AP02795 61 aa2.72□□□□□ -1.97
TOPBP1-201ENST00000260810 H0YAA0 97 aa2.67□□□□□ -1.98
TOPBP1-201ENST00000260810 PRAC1Q96KF2 57 aa2.64□□□□□ -1.99
TOPBP1-201ENST00000260810 A6NN06 94 aa2.63□□□□□ -1.99
TOPBP1-201ENST00000260810 KRTAP10-5P60370 271 aa2.61□□□□□ -1.99
TOPBP1-201ENST00000260810 LCE4AQ5TA78 99 aa2.59□□□□□ -1.99
TOPBP1-201ENST00000260810 MT1XP80297 61 aa2.59□□□□□ -2
TOPBP1-201ENST00000260810 KRTAP4-8A0A0G2JLE6 195 aa2.59□□□□□ -2
TOPBP1-201ENST00000260810 NDUFAF8A1L188 74 aa2.58□□□□□ -2
TOPBP1-201ENST00000260810 P0C880 135 aa2.57□□□□□ -2
TOPBP1-201ENST00000260810 KRTAP10-10P60014 251 aa2.54□□□□□ -2
TOPBP1-201ENST00000260810 SPRR2GQ9BYE4 73 aa2.54□□□□□ -2
TOPBP1-201ENST00000260810 KRTAP19-8Q3LI54 63 aa2.52□□□□□ -2.01
TOPBP1-201ENST00000260810 KRTAP4-2Q9BYR5 136 aa2.51□□□□□ -2.01
TOPBP1-201ENST00000260810 KRTAP23-1A1A580 65 aa2.5□□□□□ -2.01
TOPBP1-201ENST00000260810 LCE3BQ5TA77 95 aa2.49□□□□□ -2.01
TOPBP1-201ENST00000260810 C10orf95Q9H7T3 257 aa2.48□□□□□ -2.01
TOPBP1-201ENST00000260810 KRTAP10-7P60409 375 aaPredicted RBP2.48□□□□□ -2.01
TOPBP1-201ENST00000260810 KRTAP4-7Q9BYR0 210 aa2.48□□□□□ -2.01
TOPBP1-201ENST00000260810 OBSCNQ5VST9 7968 aa2.46□□□□□ -2.02
TOPBP1-201ENST00000260810 KRTAP19-7Q3SYF9 63 aa2.45□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms