RNA–Protein interactions for RNA: ENST00000259951.11

HLA-F-216, Transcript of major histocompatibility complex, class I, F, humanhuman

APPRIS P4 BASIC

Gene HLA-F, Length 1,635 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-216ENST00000259951 Q1T7F1 81 aa8.46□□□□□ -1.06
HLA-F-216ENST00000259951 H1FX-AS1Q4G0G2 97 aa8.43□□□□□ -1.06
HLA-F-216ENST00000259951 SPTSSBQ8NFR3 76 aa8.37□□□□□ -1.07
HLA-F-216ENST00000259951 S4R3F8 94 aa8.35□□□□□ -1.07
HLA-F-216ENST00000259951 KRTAP19-2Q3LHN2 52 aa8.28□□□□□ -1.08
HLA-F-216ENST00000259951 LCA10Q71F78 164 aa8.28□□□□□ -1.08
HLA-F-216ENST00000259951 FAT4Q6V0I7 4981 aa8.26□□□□□ -1.09
HLA-F-216ENST00000259951 LINC01558Q9Y6Z2 57 aa8.25□□□□□ -1.09
HLA-F-216ENST00000259951 PSPHP1O15172 72 aa8.23□□□□□ -1.09
HLA-F-216ENST00000259951 PRR15LQ9BU68 103 aa8.21□□□□□ -1.09
HLA-F-216ENST00000259951 KRTAP3-3Q9BYR6 98 aa8.21□□□□□ -1.09
HLA-F-216ENST00000259951 Q5VV11 94 aa8.19□□□□□ -1.1
HLA-F-216ENST00000259951 CSAG1Q6PB30 78 aa8.19□□□□□ -1.1
HLA-F-216ENST00000259951 BRK1Q8WUW1 75 aa8.14□□□□□ -1.11
HLA-F-216ENST00000259951 PRO0628Q9UI54 55 aa8.14□□□□□ -1.11
HLA-F-216ENST00000259951 LCE2CQ5TA81 110 aa8.13□□□□□ -1.11
HLA-F-216ENST00000259951 SEC61GP60059 68 aa8.11□□□□□ -1.11
HLA-F-216ENST00000259951 LCE2AQ5TA79 106 aaPredicted RBP8.11□□□□□ -1.11
HLA-F-216ENST00000259951 A0A1B0GU69 56 aa8.1□□□□□ -1.11
HLA-F-216ENST00000259951 A6NED7 52 aa8.03□□□□□ -1.12
HLA-F-216ENST00000259951 FLGP20930 4061 aaPredicted RBP8.02□□□□□ -1.13
HLA-F-216ENST00000259951 H0YAA0 97 aa8□□□□□ -1.13
HLA-F-216ENST00000259951 MT1HP80294 61 aa7.99□□□□□ -1.13
HLA-F-216ENST00000259951 M0R2T5 61 aa7.97□□□□□ -1.13
HLA-F-216ENST00000259951 CDC42SE1Q9NRR8 79 aa7.96□□□□□ -1.14
HLA-F-216ENST00000259951 ADM2Q7Z4H4 148 aa7.95□□□□□ -1.14
HLA-F-216ENST00000259951 KRTAP9-2Q9BYQ4 174 aa7.92□□□□□ -1.14
HLA-F-216ENST00000259951 KRTAP3-2Q9BYR7 98 aa7.91□□□□□ -1.14
HLA-F-216ENST00000259951 KRTAP10-6P60371 365 aaPredicted RBP7.89□□□□□ -1.15
HLA-F-216ENST00000259951 A0A1B0GU33 70 aa7.87□□□□□ -1.15
HLA-F-216ENST00000259951 UQCR11O14957 56 aa7.85□□□□□ -1.15
HLA-F-216ENST00000259951 P0C880 135 aa7.85□□□□□ -1.15
HLA-F-216ENST00000259951 A8MU10 97 aa7.81□□□□□ -1.16
HLA-F-216ENST00000259951 SPATA8Q6RVD6 105 aa7.79□□□□□ -1.16
HLA-F-216ENST00000259951 MIR22HGQ0VDD5 57 aa7.77□□□□□ -1.17
HLA-F-216ENST00000259951 M0QZ58 72 aa7.74□□□□□ -1.17
HLA-F-216ENST00000259951 KRTAP9-6A0A140TA67 174 aa7.71□□□□□ -1.17
HLA-F-216ENST00000259951 CRIPTQ9P021 101 aa7.71□□□□□ -1.17
HLA-F-216ENST00000259951 PMAIP1Q13794 54 aa7.7□□□□□ -1.18
HLA-F-216ENST00000259951 R4GN34 69 aa7.7□□□□□ -1.18
HLA-F-216ENST00000259951 KRTAP9-8Q9BYQ0 159 aa7.67□□□□□ -1.18
HLA-F-216ENST00000259951 LORP23490 312 aaPredicted RBP7.67□□□□□ -1.18
HLA-F-216ENST00000259951 MT2AP02795 61 aa7.66□□□□□ -1.18
HLA-F-216ENST00000259951 LCE2DQ5TA82 110 aaPredicted RBP7.65□□□□□ -1.18
HLA-F-216ENST00000259951 KRTAP13-4Q3LI77 160 aa7.64□□□□□ -1.19
HLA-F-216ENST00000259951 KRTAP10-10P60014 251 aa7.63□□□□□ -1.19
HLA-F-216ENST00000259951 A6NN06 94 aa7.63□□□□□ -1.19
HLA-F-216ENST00000259951 FSIP2Q5CZC0 6907 aa7.6□□□□□ -1.19
HLA-F-216ENST00000259951 MT1FP04733 61 aa7.6□□□□□ -1.19
HLA-F-216ENST00000259951 A0A0D9SG42 100 aa7.54□□□□□ -1.2
HLA-F-216ENST00000259951 LINC01554Q52M75 96 aa7.52□□□□□ -1.21
HLA-F-216ENST00000259951 KTN1-AS1Q86SY8 53 aa7.52□□□□□ -1.21
HLA-F-216ENST00000259951 SPRR2GQ9BYE4 73 aa7.5□□□□□ -1.21
HLA-F-216ENST00000259951 K7ERS5 55 aa7.47□□□□□ -1.21
HLA-F-216ENST00000259951 CRCT1Q9UGL9 99 aa7.45□□□□□ -1.22
HLA-F-216ENST00000259951 KRTAP19-1Q8IUB9 90 aa7.45□□□□□ -1.22
HLA-F-216ENST00000259951 KRTAP9-3Q9BYQ3 159 aa7.41□□□□□ -1.22
HLA-F-216ENST00000259951 KRTAP12-1P59990 96 aa7.39□□□□□ -1.23
HLA-F-216ENST00000259951 SPINT4Q6UDR6 99 aa7.39□□□□□ -1.23
HLA-F-216ENST00000259951 KRTAP12-2P59991 146 aa7.35□□□□□ -1.23
HLA-F-216ENST00000259951 KRTAP19-8Q3LI54 63 aa7.31□□□□□ -1.24
HLA-F-216ENST00000259951 PLAC4Q8WY50 150 aa7.29□□□□□ -1.24
HLA-F-216ENST00000259951 USH2AO75445 5202 aa7.24□□□□□ -1.25
HLA-F-216ENST00000259951 CAMK2N1Q7Z7J9 78 aa7.21□□□□□ -1.26
HLA-F-216ENST00000259951 SSPOA2VEC9 5147 aa7.2□□□□□ -1.26
HLA-F-216ENST00000259951 LCE2BO14633 110 aa7.19□□□□□ -1.26
HLA-F-216ENST00000259951 MT1BP07438 61 aa7.18□□□□□ -1.26
HLA-F-216ENST00000259951 PRAC1Q96KF2 57 aa7.14□□□□□ -1.27
HLA-F-216ENST00000259951 ROMO1P60602 79 aa7.12□□□□□ -1.27
HLA-F-216ENST00000259951 FCGBPQ9Y6R7 5405 aaPredicted RBP6.99□□□□□ -1.29
HLA-F-216ENST00000259951 C10orf95Q9H7T3 257 aa6.98□□□□□ -1.29
HLA-F-216ENST00000259951 PRO2289Q9P1D8 64 aa6.98□□□□□ -1.29
HLA-F-216ENST00000259951 KRTAP25-1Q3LHN0 102 aa6.97□□□□□ -1.29
HLA-F-216ENST00000259951 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.94□□□□□ -1.3
HLA-F-216ENST00000259951 MT1XP80297 61 aa6.94□□□□□ -1.3
HLA-F-216ENST00000259951 KRTAP10-5P60370 271 aa6.92□□□□□ -1.3
HLA-F-216ENST00000259951 KRTAP9-7A8MTY7 169 aa6.91□□□□□ -1.3
HLA-F-216ENST00000259951 TNP1P09430 55 aa6.86□□□□□ -1.31
HLA-F-216ENST00000259951 KRTAP19-6Q3LI70 58 aa6.84□□□□□ -1.31
HLA-F-216ENST00000259951 MACF1Q9UPN3 7388 aaKnown RBP6.79□□□□□ -1.32
HLA-F-216ENST00000259951 SYNE2Q8WXH0 6885 aaKnown RBP6.74□□□□□ -1.33
HLA-F-216ENST00000259951 KRTAP23-1A1A580 65 aa6.65□□□□□ -1.35
HLA-F-216ENST00000259951 KRTAP10-7P60409 375 aaPredicted RBP6.64□□□□□ -1.35
HLA-F-216ENST00000259951 PP632Q6XCG6 107 aa6.64□□□□□ -1.35
HLA-F-216ENST00000259951 KRTAP10-12P60413 245 aa6.61□□□□□ -1.35
HLA-F-216ENST00000259951 LCE3AQ5TA76 89 aa6.51□□□□□ -1.37
HLA-F-216ENST00000259951 KRTAP6-3Q3LI67 103 aa6.48□□□□□ -1.37
HLA-F-216ENST00000259951 KRTAP8-1Q8IUC2 63 aa6.4□□□□□ -1.38
HLA-F-216ENST00000259951 KRTAP4-8A0A0G2JLE6 195 aa6.37□□□□□ -1.39
HLA-F-216ENST00000259951 KRTAP4-8Q9BYQ9 185 aa6.37□□□□□ -1.39
HLA-F-216ENST00000259951 MUC12Q9UKN1 5478 aa6.37□□□□□ -1.39
HLA-F-216ENST00000259951 KRTAP12-3P60328 96 aa6.28□□□□□ -1.4
HLA-F-216ENST00000259951 NEBP20929 6669 aa6.28□□□□□ -1.4
HLA-F-216ENST00000259951 KRTAP19-5Q3LI72 72 aa6.25□□□□□ -1.41
HLA-F-216ENST00000259951 KMT2DO14686 5537 aa6.24□□□□□ -1.41
HLA-F-216ENST00000259951 KRTAP15-1Q3LI76 137 aa6.22□□□□□ -1.41
HLA-F-216ENST00000259951 KRTAP5-9P26371 169 aa6.2□□□□□ -1.42
HLA-F-216ENST00000259951 KRTAP19-7Q3SYF9 63 aa6.18□□□□□ -1.42
HLA-F-216ENST00000259951 MDN1Q9NU22 5596 aa6.17□□□□□ -1.42
HLA-F-216ENST00000259951 MT1EP04732 61 aa6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 92 ms