RNA–Protein interactions for RNA: ENST00000259229.6

CCDC115-201, Transcript of coiled-coil domain containing 115, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC115, Length 1,646 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC115-201ENST00000259229 S4R3F8 94 aa8.71□□□□□ -1.02
CCDC115-201ENST00000259229 CHKB-CPT1BH3BT56 60 aa8.67□□□□□ -1.02
CCDC115-201ENST00000259229 RPS28P62857 69 aaKnown RBP8.67□□□□□ -1.02
CCDC115-201ENST00000259229 FLGP20930 4061 aaPredicted RBP8.66□□□□□ -1.02
CCDC115-201ENST00000259229 FAT4Q6V0I7 4981 aa8.64□□□□□ -1.03
CCDC115-201ENST00000259229 MT1HP80294 61 aa8.58□□□□□ -1.04
CCDC115-201ENST00000259229 SPTSSBQ8NFR3 76 aa8.52□□□□□ -1.05
CCDC115-201ENST00000259229 SMIM26A0A096LP01 95 aa8.51□□□□□ -1.05
CCDC115-201ENST00000259229 CSAG1Q6PB30 78 aa8.5□□□□□ -1.05
CCDC115-201ENST00000259229 LCE2AQ5TA79 106 aaPredicted RBP8.48□□□□□ -1.05
CCDC115-201ENST00000259229 Q1T7F1 81 aa8.41□□□□□ -1.06
CCDC115-201ENST00000259229 LINC01558Q9Y6Z2 57 aa8.41□□□□□ -1.06
CCDC115-201ENST00000259229 M0R2T5 61 aa8.37□□□□□ -1.07
CCDC115-201ENST00000259229 KRTAP3-2Q9BYR7 98 aa8.36□□□□□ -1.07
CCDC115-201ENST00000259229 H0YAA0 97 aa8.36□□□□□ -1.07
CCDC115-201ENST00000259229 SVIPQ8NHG7 77 aa8.36□□□□□ -1.07
CCDC115-201ENST00000259229 KRTAP10-6P60371 365 aaPredicted RBP8.32□□□□□ -1.08
CCDC115-201ENST00000259229 V9GYY9 64 aa8.32□□□□□ -1.08
CCDC115-201ENST00000259229 ADM2Q7Z4H4 148 aa8.31□□□□□ -1.08
CCDC115-201ENST00000259229 A0A1B0GU69 56 aa8.29□□□□□ -1.08
CCDC115-201ENST00000259229 P0C880 135 aa8.28□□□□□ -1.08
CCDC115-201ENST00000259229 PRR15LQ9BU68 103 aa8.28□□□□□ -1.08
CCDC115-201ENST00000259229 KRTAP9-8Q9BYQ0 159 aa8.27□□□□□ -1.09
CCDC115-201ENST00000259229 LORP23490 312 aaPredicted RBP8.26□□□□□ -1.09
CCDC115-201ENST00000259229 KRTAP9-2Q9BYQ4 174 aa8.26□□□□□ -1.09
CCDC115-201ENST00000259229 PSPHP1O15172 72 aa8.25□□□□□ -1.09
CCDC115-201ENST00000259229 SEC61GP60059 68 aa8.23□□□□□ -1.09
CCDC115-201ENST00000259229 Q5VV11 94 aa8.23□□□□□ -1.09
CCDC115-201ENST00000259229 MT2AP02795 61 aa8.21□□□□□ -1.09
CCDC115-201ENST00000259229 MT1FP04733 61 aa8.18□□□□□ -1.1
CCDC115-201ENST00000259229 A0A1B0GU33 70 aa8.11□□□□□ -1.11
CCDC115-201ENST00000259229 KRTAP13-4Q3LI77 160 aa8.09□□□□□ -1.11
CCDC115-201ENST00000259229 KRTAP10-10P60014 251 aa8.06□□□□□ -1.12
CCDC115-201ENST00000259229 SPATA8Q6RVD6 105 aa8.02□□□□□ -1.13
CCDC115-201ENST00000259229 UQCR11O14957 56 aa8.01□□□□□ -1.13
CCDC115-201ENST00000259229 CRIPTQ9P021 101 aa8□□□□□ -1.13
CCDC115-201ENST00000259229 M0QZ58 72 aa7.99□□□□□ -1.13
CCDC115-201ENST00000259229 R4GN34 69 aa7.99□□□□□ -1.13
CCDC115-201ENST00000259229 LCE2DQ5TA82 110 aaPredicted RBP7.98□□□□□ -1.13
CCDC115-201ENST00000259229 KRTAP19-1Q8IUB9 90 aa7.98□□□□□ -1.13
CCDC115-201ENST00000259229 A6NED7 52 aa7.97□□□□□ -1.13
CCDC115-201ENST00000259229 KRTAP9-3Q9BYQ3 159 aa7.97□□□□□ -1.13
CCDC115-201ENST00000259229 KRTAP9-6A0A140TA67 174 aa7.96□□□□□ -1.14
CCDC115-201ENST00000259229 SPRR2GQ9BYE4 73 aa7.95□□□□□ -1.14
CCDC115-201ENST00000259229 MIR22HGQ0VDD5 57 aa7.92□□□□□ -1.14
CCDC115-201ENST00000259229 A8MU10 97 aa7.89□□□□□ -1.15
CCDC115-201ENST00000259229 FSIP2Q5CZC0 6907 aa7.86□□□□□ -1.15
CCDC115-201ENST00000259229 CDC42SE1Q9NRR8 79 aa7.84□□□□□ -1.15
CCDC115-201ENST00000259229 A0A0D9SG42 100 aa7.83□□□□□ -1.16
CCDC115-201ENST00000259229 LINC01554Q52M75 96 aa7.82□□□□□ -1.16
CCDC115-201ENST00000259229 CRCT1Q9UGL9 99 aa7.79□□□□□ -1.16
CCDC115-201ENST00000259229 LCE2BO14633 110 aa7.78□□□□□ -1.16
CCDC115-201ENST00000259229 KRTAP19-8Q3LI54 63 aa7.78□□□□□ -1.16
CCDC115-201ENST00000259229 BRK1Q8WUW1 75 aa7.77□□□□□ -1.17
CCDC115-201ENST00000259229 KRTAP12-1P59990 96 aa7.74□□□□□ -1.17
CCDC115-201ENST00000259229 A6NN06 94 aa7.73□□□□□ -1.17
CCDC115-201ENST00000259229 KRTAP12-2P59991 146 aa7.72□□□□□ -1.17
CCDC115-201ENST00000259229 MT1BP07438 61 aa7.71□□□□□ -1.17
CCDC115-201ENST00000259229 PRO0628Q9UI54 55 aa7.65□□□□□ -1.18
CCDC115-201ENST00000259229 SPINT4Q6UDR6 99 aa7.64□□□□□ -1.19
CCDC115-201ENST00000259229 USH2AO75445 5202 aa7.57□□□□□ -1.2
CCDC115-201ENST00000259229 PLAC4Q8WY50 150 aa7.55□□□□□ -1.2
CCDC115-201ENST00000259229 K7ERS5 55 aa7.51□□□□□ -1.21
CCDC115-201ENST00000259229 SSPOA2VEC9 5147 aa7.44□□□□□ -1.22
CCDC115-201ENST00000259229 CAMK2N1Q7Z7J9 78 aa7.44□□□□□ -1.22
CCDC115-201ENST00000259229 MT1XP80297 61 aa7.41□□□□□ -1.22
CCDC115-201ENST00000259229 KRTAP10-5P60370 271 aa7.4□□□□□ -1.22
CCDC115-201ENST00000259229 C10orf95Q9H7T3 257 aa7.34□□□□□ -1.23
CCDC115-201ENST00000259229 KRTAP19-6Q3LI70 58 aa7.33□□□□□ -1.24
CCDC115-201ENST00000259229 PMAIP1Q13794 54 aa7.32□□□□□ -1.24
CCDC115-201ENST00000259229 FCGBPQ9Y6R7 5405 aaPredicted RBP7.28□□□□□ -1.24
CCDC115-201ENST00000259229 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.27□□□□□ -1.25
CCDC115-201ENST00000259229 PRO2289Q9P1D8 64 aa7.25□□□□□ -1.25
CCDC115-201ENST00000259229 ROMO1P60602 79 aa7.24□□□□□ -1.25
CCDC115-201ENST00000259229 KRTAP9-7A8MTY7 169 aa7.16□□□□□ -1.26
CCDC115-201ENST00000259229 KRTAP10-7P60409 375 aaPredicted RBP7.11□□□□□ -1.27
CCDC115-201ENST00000259229 TNP1P09430 55 aa7.06□□□□□ -1.28
CCDC115-201ENST00000259229 KRTAP25-1Q3LHN0 102 aa7.06□□□□□ -1.28
CCDC115-201ENST00000259229 MACF1Q9UPN3 7388 aaKnown RBP7.03□□□□□ -1.28
CCDC115-201ENST00000259229 KRTAP10-12P60413 245 aa7.02□□□□□ -1.29
CCDC115-201ENST00000259229 KTN1-AS1Q86SY8 53 aa7.01□□□□□ -1.29
CCDC115-201ENST00000259229 PRAC1Q96KF2 57 aa6.94□□□□□ -1.3
CCDC115-201ENST00000259229 SYNE2Q8WXH0 6885 aaKnown RBP6.93□□□□□ -1.3
CCDC115-201ENST00000259229 LCE3AQ5TA76 89 aa6.87□□□□□ -1.31
CCDC115-201ENST00000259229 KRTAP4-8A0A0G2JLE6 195 aa6.87□□□□□ -1.31
CCDC115-201ENST00000259229 KRTAP4-8Q9BYQ9 185 aa6.87□□□□□ -1.31
CCDC115-201ENST00000259229 KRTAP23-1A1A580 65 aa6.83□□□□□ -1.32
CCDC115-201ENST00000259229 KMT2DO14686 5537 aa6.83□□□□□ -1.32
CCDC115-201ENST00000259229 KRTAP6-3Q3LI67 103 aa6.76□□□□□ -1.33
CCDC115-201ENST00000259229 PP632Q6XCG6 107 aa6.76□□□□□ -1.33
CCDC115-201ENST00000259229 KRTAP8-1Q8IUC2 63 aa6.73□□□□□ -1.33
CCDC115-201ENST00000259229 KRTAP19-5Q3LI72 72 aa6.64□□□□□ -1.35
CCDC115-201ENST00000259229 KRTAP19-7Q3SYF9 63 aa6.64□□□□□ -1.35
CCDC115-201ENST00000259229 KRTAP12-3P60328 96 aa6.58□□□□□ -1.36
CCDC115-201ENST00000259229 MUC12Q9UKN1 5478 aa6.57□□□□□ -1.36
CCDC115-201ENST00000259229 NEBP20929 6669 aa6.51□□□□□ -1.37
CCDC115-201ENST00000259229 MT1EP04732 61 aa6.5□□□□□ -1.37
CCDC115-201ENST00000259229 KRTAP5-9P26371 169 aa6.49□□□□□ -1.37
CCDC115-201ENST00000259229 SPRR2FQ96RM1 72 aa6.45□□□□□ -1.38
CCDC115-201ENST00000259229 KRTAP15-1Q3LI76 137 aa6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 105.4 ms