RNA–Protein interactions for RNA: ENST00000258962.4

SRSF1-201, Transcript of serine and arginine rich splicing factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRSF1, Length 1,513 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-201ENST00000258962 KRTAP3-1Q9BYR8 98 aa8.95□□□□□ -0.98
SRSF1-201ENST00000258962 FAT4Q6V0I7 4981 aa8.95□□□□□ -0.98
SRSF1-201ENST00000258962 SPTSSBQ8NFR3 76 aa8.94□□□□□ -0.98
SRSF1-201ENST00000258962 COX6B2Q6YFQ2 88 aa8.91□□□□□ -0.98
SRSF1-201ENST00000258962 LINC01558Q9Y6Z2 57 aa8.9□□□□□ -0.98
SRSF1-201ENST00000258962 LCE2AQ5TA79 106 aaPredicted RBP8.9□□□□□ -0.99
SRSF1-201ENST00000258962 PSPHP1O15172 72 aa8.84□□□□□ -0.99
SRSF1-201ENST00000258962 PRR15LQ9BU68 103 aa8.84□□□□□ -0.99
SRSF1-201ENST00000258962 KRTAP19-2Q3LHN2 52 aa8.8□□□□□ -1
SRSF1-201ENST00000258962 LCE2CQ5TA81 110 aa8.8□□□□□ -1
SRSF1-201ENST00000258962 Q5VV11 94 aa8.75□□□□□ -1.01
SRSF1-201ENST00000258962 A0A1B0GU69 56 aa8.74□□□□□ -1.01
SRSF1-201ENST00000258962 RBM12B-AS1Q9P1G2 102 aa8.74□□□□□ -1.01
SRSF1-201ENST00000258962 SEC61GP60059 68 aa8.72□□□□□ -1.01
SRSF1-201ENST00000258962 MT1HP80294 61 aa8.7□□□□□ -1.02
SRSF1-201ENST00000258962 H1FX-AS1Q4G0G2 97 aa8.68□□□□□ -1.02
SRSF1-201ENST00000258962 BRK1Q8WUW1 75 aa8.66□□□□□ -1.02
SRSF1-201ENST00000258962 A6NED7 52 aa8.64□□□□□ -1.03
SRSF1-201ENST00000258962 M0R2T5 61 aa8.64□□□□□ -1.03
SRSF1-201ENST00000258962 LCA10Q71F78 164 aa8.64□□□□□ -1.03
SRSF1-201ENST00000258962 S4R3F8 94 aa8.63□□□□□ -1.03
SRSF1-201ENST00000258962 PRO0628Q9UI54 55 aa8.61□□□□□ -1.03
SRSF1-201ENST00000258962 UQCR11O14957 56 aa8.54□□□□□ -1.04
SRSF1-201ENST00000258962 CDC42SE1Q9NRR8 79 aa8.52□□□□□ -1.05
SRSF1-201ENST00000258962 KRTAP9-2Q9BYQ4 174 aa8.51□□□□□ -1.05
SRSF1-201ENST00000258962 FLGP20930 4061 aaPredicted RBP8.51□□□□□ -1.05
SRSF1-201ENST00000258962 KRTAP10-6P60371 365 aaPredicted RBP8.5□□□□□ -1.05
SRSF1-201ENST00000258962 LORP23490 312 aaPredicted RBP8.47□□□□□ -1.05
SRSF1-201ENST00000258962 CSAG1Q6PB30 78 aa8.46□□□□□ -1.05
SRSF1-201ENST00000258962 MIR22HGQ0VDD5 57 aa8.42□□□□□ -1.06
SRSF1-201ENST00000258962 SPATA8Q6RVD6 105 aa8.41□□□□□ -1.06
SRSF1-201ENST00000258962 A0A1B0GU33 70 aa8.4□□□□□ -1.06
SRSF1-201ENST00000258962 SVIPQ8NHG7 77 aa8.29□□□□□ -1.08
SRSF1-201ENST00000258962 H0YAA0 97 aa8.29□□□□□ -1.08
SRSF1-201ENST00000258962 A8MU10 97 aa8.27□□□□□ -1.09
SRSF1-201ENST00000258962 ADM2Q7Z4H4 148 aa8.25□□□□□ -1.09
SRSF1-201ENST00000258962 KRTAP9-8Q9BYQ0 159 aa8.25□□□□□ -1.09
SRSF1-201ENST00000258962 P0C880 135 aa8.24□□□□□ -1.09
SRSF1-201ENST00000258962 PMAIP1Q13794 54 aa8.23□□□□□ -1.09
SRSF1-201ENST00000258962 KRTAP9-6A0A140TA67 174 aa8.16□□□□□ -1.1
SRSF1-201ENST00000258962 MT2AP02795 61 aa8.16□□□□□ -1.1
SRSF1-201ENST00000258962 K7ERS5 55 aa8.13□□□□□ -1.11
SRSF1-201ENST00000258962 KRTAP10-10P60014 251 aa8.13□□□□□ -1.11
SRSF1-201ENST00000258962 M0QZ58 72 aa8.13□□□□□ -1.11
SRSF1-201ENST00000258962 KRTAP13-4Q3LI77 160 aa8.1□□□□□ -1.11
SRSF1-201ENST00000258962 FSIP2Q5CZC0 6907 aa8.09□□□□□ -1.11
SRSF1-201ENST00000258962 MT1FP04733 61 aa8.09□□□□□ -1.11
SRSF1-201ENST00000258962 CRCT1Q9UGL9 99 aa8.09□□□□□ -1.11
SRSF1-201ENST00000258962 A6NN06 94 aa8.08□□□□□ -1.12
SRSF1-201ENST00000258962 KRTAP9-3Q9BYQ3 159 aa7.99□□□□□ -1.13
SRSF1-201ENST00000258962 R4GN34 69 aa7.98□□□□□ -1.13
SRSF1-201ENST00000258962 A0A0D9SG42 100 aa7.96□□□□□ -1.14
SRSF1-201ENST00000258962 KTN1-AS1Q86SY8 53 aa7.93□□□□□ -1.14
SRSF1-201ENST00000258962 CRIPTQ9P021 101 aa7.92□□□□□ -1.14
SRSF1-201ENST00000258962 LCE2BO14633 110 aa7.9□□□□□ -1.14
SRSF1-201ENST00000258962 USH2AO75445 5202 aa7.89□□□□□ -1.15
SRSF1-201ENST00000258962 SPINT4Q6UDR6 99 aa7.81□□□□□ -1.16
SRSF1-201ENST00000258962 LINC01554Q52M75 96 aa7.8□□□□□ -1.16
SRSF1-201ENST00000258962 KRTAP12-1P59990 96 aa7.78□□□□□ -1.16
SRSF1-201ENST00000258962 KRTAP12-2P59991 146 aa7.76□□□□□ -1.17
SRSF1-201ENST00000258962 SSPOA2VEC9 5147 aa7.74□□□□□ -1.17
SRSF1-201ENST00000258962 KRTAP19-1Q8IUB9 90 aa7.73□□□□□ -1.17
SRSF1-201ENST00000258962 SPRR2GQ9BYE4 73 aa7.73□□□□□ -1.17
SRSF1-201ENST00000258962 ROMO1P60602 79 aa7.72□□□□□ -1.17
SRSF1-201ENST00000258962 KRTAP19-6Q3LI70 58 aa7.6□□□□□ -1.19
SRSF1-201ENST00000258962 FCGBPQ9Y6R7 5405 aaPredicted RBP7.6□□□□□ -1.19
SRSF1-201ENST00000258962 PRAC1Q96KF2 57 aa7.56□□□□□ -1.2
SRSF1-201ENST00000258962 KRTAP19-8Q3LI54 63 aa7.54□□□□□ -1.2
SRSF1-201ENST00000258962 CAMK2N1Q7Z7J9 78 aa7.52□□□□□ -1.2
SRSF1-201ENST00000258962 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.5□□□□□ -1.21
SRSF1-201ENST00000258962 MT1BP07438 61 aa7.47□□□□□ -1.21
SRSF1-201ENST00000258962 PLAC4Q8WY50 150 aa7.47□□□□□ -1.21
SRSF1-201ENST00000258962 KRTAP25-1Q3LHN0 102 aa7.45□□□□□ -1.22
SRSF1-201ENST00000258962 KRTAP9-7A8MTY7 169 aa7.37□□□□□ -1.23
SRSF1-201ENST00000258962 C10orf95Q9H7T3 257 aa7.37□□□□□ -1.23
SRSF1-201ENST00000258962 KRTAP10-5P60370 271 aa7.28□□□□□ -1.24
SRSF1-201ENST00000258962 MACF1Q9UPN3 7388 aaKnown RBP7.26□□□□□ -1.25
SRSF1-201ENST00000258962 MT1XP80297 61 aa7.22□□□□□ -1.25
SRSF1-201ENST00000258962 TNP1P09430 55 aa7.2□□□□□ -1.26
SRSF1-201ENST00000258962 SYNE2Q8WXH0 6885 aaKnown RBP7.17□□□□□ -1.26
SRSF1-201ENST00000258962 PRO2289Q9P1D8 64 aa7.17□□□□□ -1.26
SRSF1-201ENST00000258962 PP632Q6XCG6 107 aa7.16□□□□□ -1.26
SRSF1-201ENST00000258962 LOC100996750A0A140TA64 210 aa7.14□□□□□ -1.27
SRSF1-201ENST00000258962 KRTAP4-6Q9BYQ5 205 aa7.14□□□□□ -1.27
SRSF1-201ENST00000258962 KRTAP6-3Q3LI67 103 aa7.1□□□□□ -1.27
SRSF1-201ENST00000258962 KRTAP23-1A1A580 65 aa7.09□□□□□ -1.27
SRSF1-201ENST00000258962 KRTAP10-7P60409 375 aaPredicted RBP6.93□□□□□ -1.3
SRSF1-201ENST00000258962 KRTAP5-9P26371 169 aa6.83□□□□□ -1.32
SRSF1-201ENST00000258962 LCE3AQ5TA76 89 aa6.83□□□□□ -1.32
SRSF1-201ENST00000258962 KRTAP10-12P60413 245 aa6.82□□□□□ -1.32
SRSF1-201ENST00000258962 KMT2DO14686 5537 aa6.8□□□□□ -1.32
SRSF1-201ENST00000258962 KRTAP8-1Q8IUC2 63 aa6.78□□□□□ -1.32
SRSF1-201ENST00000258962 MUC12Q9UKN1 5478 aa6.77□□□□□ -1.33
SRSF1-201ENST00000258962 NEBP20929 6669 aa6.73□□□□□ -1.33
SRSF1-201ENST00000258962 SPRR2FQ96RM1 72 aa6.73□□□□□ -1.33
SRSF1-201ENST00000258962 KRTAP4-8A0A0G2JLE6 195 aa6.7□□□□□ -1.34
SRSF1-201ENST00000258962 KRTAP4-8Q9BYQ9 185 aa6.7□□□□□ -1.34
SRSF1-201ENST00000258962 MDN1Q9NU22 5596 aa6.65□□□□□ -1.34
SRSF1-201ENST00000258962 KRTAP15-1Q3LI76 137 aa6.59□□□□□ -1.35
SRSF1-201ENST00000258962 SPRR2EP22531 72 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms