RNA–Protein interactions for RNA: ENST00000258607.9

CKAP2-201, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CKAP2, Length 3,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-201ENST00000258607 PRAC1Q96KF2 57 aa4.79□□□□□ -1.64
CKAP2-201ENST00000258607 LINC01554Q52M75 96 aa4.79□□□□□ -1.64
CKAP2-201ENST00000258607 RNF213Q63HN8 5207 aa4.79□□□□□ -1.64
CKAP2-201ENST00000258607 LINC01558Q9Y6Z2 57 aa4.79□□□□□ -1.64
CKAP2-201ENST00000258607 KRTAP3-1Q9BYR8 98 aa4.78□□□□□ -1.65
CKAP2-201ENST00000258607 ADM2Q7Z4H4 148 aa4.77□□□□□ -1.65
CKAP2-201ENST00000258607 A8MUU9 505 aa4.77□□□□□ -1.65
CKAP2-201ENST00000258607 MIR22HGQ0VDD5 57 aa4.76□□□□□ -1.65
CKAP2-201ENST00000258607 MT1HL1P0DM35 61 aa4.76□□□□□ -1.65
CKAP2-201ENST00000258607 C20orf166-AS1Q96NR2 134 aa4.76□□□□□ -1.65
CKAP2-201ENST00000258607 Q75L30 129 aa4.75□□□□□ -1.65
CKAP2-201ENST00000258607 UQCR11O14957 56 aa4.73□□□□□ -1.65
CKAP2-201ENST00000258607 TNXBP22105 4242 aa4.72□□□□□ -1.65
CKAP2-201ENST00000258607 CDC42SE1Q9NRR8 79 aa4.7□□□□□ -1.66
CKAP2-201ENST00000258607 COX6B2Q6YFQ2 88 aa4.7□□□□□ -1.66
CKAP2-201ENST00000258607 RPL37P61927 97 aaKnown RBP4.7□□□□□ -1.66
CKAP2-201ENST00000258607 PCLOQ9Y6V0 5065 aa4.69□□□□□ -1.66
CKAP2-201ENST00000258607 FAT4Q6V0I7 4981 aa4.69□□□□□ -1.66
CKAP2-201ENST00000258607 RBM12B-AS1Q9P1G2 102 aa4.68□□□□□ -1.66
CKAP2-201ENST00000258607 RPS29P62273 56 aaKnown RBP4.68□□□□□ -1.66
CKAP2-201ENST00000258607 A0A1B0GU33 70 aa4.67□□□□□ -1.66
CKAP2-201ENST00000258607 SPINT4Q6UDR6 99 aa4.65□□□□□ -1.66
CKAP2-201ENST00000258607 S4R3F8 94 aa4.65□□□□□ -1.66
CKAP2-201ENST00000258607 P0C880 135 aa4.64□□□□□ -1.67
CKAP2-201ENST00000258607 UBR4Q5T4S7 5183 aa4.63□□□□□ -1.67
CKAP2-201ENST00000258607 KTN1-AS1Q86SY8 53 aa4.62□□□□□ -1.67
CKAP2-201ENST00000258607 H0YAA0 97 aa4.61□□□□□ -1.67
CKAP2-201ENST00000258607 A6NN06 94 aa4.58□□□□□ -1.68
CKAP2-201ENST00000258607 H1FX-AS1Q4G0G2 97 aa4.57□□□□□ -1.68
CKAP2-201ENST00000258607 H3BS24 57 aa4.56□□□□□ -1.68
CKAP2-201ENST00000258607 CSAG1Q6PB30 78 aa4.54□□□□□ -1.68
CKAP2-201ENST00000258607 KRTAP13-4Q3LI77 160 aa4.54□□□□□ -1.68
CKAP2-201ENST00000258607 KRTAP4-1Q9BYQ7 146 aa4.53□□□□□ -1.68
CKAP2-201ENST00000258607 M0R2T5 61 aa4.51□□□□□ -1.69
CKAP2-201ENST00000258607 K7ERS5 55 aa4.51□□□□□ -1.69
CKAP2-201ENST00000258607 TPRXLQ17RH7 258 aa4.5□□□□□ -1.69
CKAP2-201ENST00000258607 M0QZ58 72 aa4.5□□□□□ -1.69
CKAP2-201ENST00000258607 SEC61BP60468 96 aaKnown RBP4.48□□□□□ -1.69
CKAP2-201ENST00000258607 BIRC6Q9NR09 4857 aa4.48□□□□□ -1.69
CKAP2-201ENST00000258607 C10orf95Q9H7T3 257 aa4.47□□□□□ -1.69
CKAP2-201ENST00000258607 R4GN34 69 aa4.47□□□□□ -1.69
CKAP2-201ENST00000258607 KRTAP10-6P60371 365 aaPredicted RBP4.45□□□□□ -1.7
CKAP2-201ENST00000258607 FSIP2Q5CZC0 6907 aa4.44□□□□□ -1.7
CKAP2-201ENST00000258607 HMCN2Q8NDA2 5059 aa4.43□□□□□ -1.7
CKAP2-201ENST00000258607 LORP23490 312 aaPredicted RBP4.43□□□□□ -1.7
CKAP2-201ENST00000258607 LCE2BO14633 110 aa4.39□□□□□ -1.71
CKAP2-201ENST00000258607 KRTAP12-2P59991 146 aa4.39□□□□□ -1.71
CKAP2-201ENST00000258607 CAMK2N1Q7Z7J9 78 aa4.33□□□□□ -1.72
CKAP2-201ENST00000258607 LCE2AQ5TA79 106 aaPredicted RBP4.28□□□□□ -1.72
CKAP2-201ENST00000258607 ROMO1P60602 79 aa4.27□□□□□ -1.73
CKAP2-201ENST00000258607 MUC17Q685J3 4493 aa4.26□□□□□ -1.73
CKAP2-201ENST00000258607 USH2AO75445 5202 aa4.26□□□□□ -1.73
CKAP2-201ENST00000258607 KRTAP12-1P59990 96 aa4.26□□□□□ -1.73
CKAP2-201ENST00000258607 KRTAP25-1Q3LHN0 102 aa4.21□□□□□ -1.74
CKAP2-201ENST00000258607 KRTAP10-10P60014 251 aa4.19□□□□□ -1.74
CKAP2-201ENST00000258607 FLGP20930 4061 aaPredicted RBP4.1□□□□□ -1.75
CKAP2-201ENST00000258607 KRTAP19-2Q3LHN2 52 aa4.07□□□□□ -1.76
CKAP2-201ENST00000258607 LCE2CQ5TA81 110 aa4.06□□□□□ -1.76
CKAP2-201ENST00000258607 A0A0A0MQY5 61 aa4.05□□□□□ -1.76
CKAP2-201ENST00000258607 KMT2DO14686 5537 aa4.05□□□□□ -1.76
CKAP2-201ENST00000258607 MT1HP80294 61 aa4.03□□□□□ -1.76
CKAP2-201ENST00000258607 PLAC4Q8WY50 150 aa4.02□□□□□ -1.77
CKAP2-201ENST00000258607 MT1FP04733 61 aa3.99□□□□□ -1.77
CKAP2-201ENST00000258607 NDUFAF8A1L188 74 aa3.95□□□□□ -1.78
CKAP2-201ENST00000258607 MT2AP02795 61 aa3.93□□□□□ -1.78
CKAP2-201ENST00000258607 TNP1P09430 55 aa3.9□□□□□ -1.79
CKAP2-201ENST00000258607 LOC100996750A0A140TA64 210 aa3.89□□□□□ -1.79
CKAP2-201ENST00000258607 KRTAP19-1Q8IUB9 90 aa3.89□□□□□ -1.79
CKAP2-201ENST00000258607 KRTAP4-6Q9BYQ5 205 aa3.89□□□□□ -1.79
CKAP2-201ENST00000258607 KRTAP9-8Q9BYQ0 159 aa3.84□□□□□ -1.79
CKAP2-201ENST00000258607 KRTAP15-1Q3LI76 137 aa3.83□□□□□ -1.8
CKAP2-201ENST00000258607 OBSCNQ5VST9 7968 aa3.83□□□□□ -1.8
CKAP2-201ENST00000258607 DSTQ03001 7570 aaKnown RBP3.82□□□□□ -1.8
CKAP2-201ENST00000258607 LCE3AQ5TA76 89 aa3.77□□□□□ -1.81
CKAP2-201ENST00000258607 SPRR2GQ9BYE4 73 aa3.74□□□□□ -1.81
CKAP2-201ENST00000258607 LUZP6Q538Z0 58 aa3.71□□□□□ -1.82
CKAP2-201ENST00000258607 MT1BP07438 61 aa3.7□□□□□ -1.82
CKAP2-201ENST00000258607 KRTAP10-7P60409 375 aaPredicted RBP3.69□□□□□ -1.82
CKAP2-201ENST00000258607 KRTAP4-8A0A0G2JLE6 195 aa3.67□□□□□ -1.82
CKAP2-201ENST00000258607 KRTAP4-8Q9BYQ9 185 aa3.67□□□□□ -1.82
CKAP2-201ENST00000258607 KRTAP9-3Q9BYQ3 159 aa3.65□□□□□ -1.83
CKAP2-201ENST00000258607 MT1XP80297 61 aa3.65□□□□□ -1.83
CKAP2-201ENST00000258607 MUC12Q9UKN1 5478 aa3.64□□□□□ -1.83
CKAP2-201ENST00000258607 KRTAP10-5P60370 271 aa3.63□□□□□ -1.83
CKAP2-201ENST00000258607 FCGBPQ9Y6R7 5405 aaPredicted RBP3.63□□□□□ -1.83
CKAP2-201ENST00000258607 SYNE1Q8NF91 8797 aaKnown RBP3.63□□□□□ -1.83
CKAP2-201ENST00000258607 SSPOA2VEC9 5147 aa3.63□□□□□ -1.83
CKAP2-201ENST00000258607 KRTAP10-12P60413 245 aa3.63□□□□□ -1.83
CKAP2-201ENST00000258607 PP632Q6XCG6 107 aa3.61□□□□□ -1.83
CKAP2-201ENST00000258607 PRO2289Q9P1D8 64 aa3.57□□□□□ -1.84
CKAP2-201ENST00000258607 KRTAP12-3P60328 96 aa3.55□□□□□ -1.84
CKAP2-201ENST00000258607 KRTAP19-8Q3LI54 63 aa3.53□□□□□ -1.84
CKAP2-201ENST00000258607 SYNE2Q8WXH0 6885 aaKnown RBP3.52□□□□□ -1.85
CKAP2-201ENST00000258607 CRCT1Q9UGL9 99 aa3.51□□□□□ -1.85
CKAP2-201ENST00000258607 KRTAP4-7Q9BYR0 210 aa3.5□□□□□ -1.85
CKAP2-201ENST00000258607 KRTAP19-5Q3LI72 72 aa3.5□□□□□ -1.85
CKAP2-201ENST00000258607 MACF1Q9UPN3 7388 aaKnown RBP3.45□□□□□ -1.86
CKAP2-201ENST00000258607 KRTAP4-12Q9BQ66 201 aa3.45□□□□□ -1.86
CKAP2-201ENST00000258607 KRTAP9-2Q9BYQ4 174 aa3.44□□□□□ -1.86
CKAP2-201ENST00000258607 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.42□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 85.2 ms