RNA–Protein interactions for RNA: ENST00000254998.2

NXT1-201, Transcript of nuclear transport factor 2 like export factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NXT1, Length 1,123 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXT1-201ENST00000254998 A8MUN3 132 aa10.04□□□□□ -0.8
NXT1-201ENST00000254998 FAM236AA0A1B0GUQ0 79 aa9.97□□□□□ -0.81
NXT1-201ENST00000254998 FAM236BA0A1B0GV22 79 aa9.97□□□□□ -0.81
NXT1-201ENST00000254998 SMIM20Q8N5G0 67 aa9.97□□□□□ -0.81
NXT1-201ENST00000254998 TRAV7A0A075B6U4 112 aa9.94□□□□□ -0.82
NXT1-201ENST00000254998 SSPOA2VEC9 5147 aa9.92□□□□□ -0.82
NXT1-201ENST00000254998 NDUFC1O43677 76 aa9.9□□□□□ -0.82
NXT1-201ENST00000254998 KRTAP19-1Q8IUB9 90 aa9.83□□□□□ -0.84
NXT1-201ENST00000254998 DMAC1Q96GE9 116 aa9.83□□□□□ -0.84
NXT1-201ENST00000254998 H0YAA0 97 aa9.79□□□□□ -0.84
NXT1-201ENST00000254998 SPRR2GQ9BYE4 73 aa9.76□□□□□ -0.85
NXT1-201ENST00000254998 KRTAP19-6Q3LI70 58 aa9.74□□□□□ -0.85
NXT1-201ENST00000254998 CRIPTQ9P021 101 aa9.72□□□□□ -0.85
NXT1-201ENST00000254998 FCGBPQ9Y6R7 5405 aaPredicted RBP9.72□□□□□ -0.85
NXT1-201ENST00000254998 SERP2Q8N6R1 65 aa9.7□□□□□ -0.86
NXT1-201ENST00000254998 KRTAP19-8Q3LI54 63 aa9.66□□□□□ -0.86
NXT1-201ENST00000254998 SNURFQ9Y675 71 aa9.65□□□□□ -0.86
NXT1-201ENST00000254998 ACYP2P14621 99 aa9.63□□□□□ -0.87
NXT1-201ENST00000254998 ADM2Q7Z4H4 148 aa9.62□□□□□ -0.87
NXT1-201ENST00000254998 MT1BP07438 61 aa9.6□□□□□ -0.87
NXT1-201ENST00000254998 Q5VV11 94 aa9.6□□□□□ -0.87
NXT1-201ENST00000254998 C20orf197Q8N268 126 aa9.6□□□□□ -0.87
NXT1-201ENST00000254998 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.56□□□□□ -0.88
NXT1-201ENST00000254998 SPANXA2-OT1Q8N9U9 137 aa9.56□□□□□ -0.88
NXT1-201ENST00000254998 SPTSSBQ8NFR3 76 aa9.48□□□□□ -0.89
NXT1-201ENST00000254998 COX7CP15954 63 aa9.46□□□□□ -0.9
NXT1-201ENST00000254998 P0C880 135 aa9.45□□□□□ -0.9
NXT1-201ENST00000254998 CHKB-CPT1BH3BT56 60 aa9.43□□□□□ -0.9
NXT1-201ENST00000254998 A6NN06 94 aa9.36□□□□□ -0.91
NXT1-201ENST00000254998 R4GN34 69 aa9.36□□□□□ -0.91
NXT1-201ENST00000254998 KRTAP9-7A8MTY7 169 aa9.35□□□□□ -0.91
NXT1-201ENST00000254998 KRTAP10-5P60370 271 aa9.33□□□□□ -0.92
NXT1-201ENST00000254998 M0QZ58 72 aa9.29□□□□□ -0.92
NXT1-201ENST00000254998 MACF1Q9UPN3 7388 aaKnown RBP9.28□□□□□ -0.92
NXT1-201ENST00000254998 H7BZZ5 65 aa9.27□□□□□ -0.93
NXT1-201ENST00000254998 ANAPC13Q9BS18 74 aa9.25□□□□□ -0.93
NXT1-201ENST00000254998 CYSTM1Q9H1C7 97 aa9.25□□□□□ -0.93
NXT1-201ENST00000254998 COA5Q86WW8 74 aa9.24□□□□□ -0.93
NXT1-201ENST00000254998 PLAC4Q8WY50 150 aa9.18□□□□□ -0.94
NXT1-201ENST00000254998 SYNE2Q8WXH0 6885 aaKnown RBP9.13□□□□□ -0.95
NXT1-201ENST00000254998 LINC01554Q52M75 96 aa9.11□□□□□ -0.95
NXT1-201ENST00000254998 PRO2289Q9P1D8 64 aa9.09□□□□□ -0.95
NXT1-201ENST00000254998 MT1XP80297 61 aa9.07□□□□□ -0.96
NXT1-201ENST00000254998 KRTAP6-3Q3LI67 103 aa9.07□□□□□ -0.96
NXT1-201ENST00000254998 CCDC179H3BU77 68 aa9.05□□□□□ -0.96
NXT1-201ENST00000254998 SEC61GP60059 68 aa8.97□□□□□ -0.97
NXT1-201ENST00000254998 KRTAP13-4Q3LI77 160 aa8.94□□□□□ -0.98
NXT1-201ENST00000254998 SERP1Q9Y6X1 66 aa8.94□□□□□ -0.98
NXT1-201ENST00000254998 ATP5EP56381 51 aaPredicted RBP8.92□□□□□ -0.98
NXT1-201ENST00000254998 KRTAP12-2P59991 146 aa8.83□□□□□ -1
NXT1-201ENST00000254998 A0A1B0GU33 70 aa8.79□□□□□ -1
NXT1-201ENST00000254998 KRTAP5-9P26371 169 aa8.78□□□□□ -1
NXT1-201ENST00000254998 TMEM258P61165 79 aa8.77□□□□□ -1.01
NXT1-201ENST00000254998 A0A1B0GU69 56 aa8.74□□□□□ -1.01
NXT1-201ENST00000254998 SPATA8Q6RVD6 105 aa8.71□□□□□ -1.02
NXT1-201ENST00000254998 A0A0D9SG42 100 aa8.66□□□□□ -1.02
NXT1-201ENST00000254998 KMT2DO14686 5537 aa8.64□□□□□ -1.03
NXT1-201ENST00000254998 CAMK2N1Q7Z7J9 78 aa8.64□□□□□ -1.03
NXT1-201ENST00000254998 NEBP20929 6669 aa8.63□□□□□ -1.03
NXT1-201ENST00000254998 KRTAP10-7P60409 375 aaPredicted RBP8.63□□□□□ -1.03
NXT1-201ENST00000254998 KRTAP10-12P60413 245 aa8.63□□□□□ -1.03
NXT1-201ENST00000254998 MUC12Q9UKN1 5478 aa8.6□□□□□ -1.03
NXT1-201ENST00000254998 KRTAP8-1Q8IUC2 63 aa8.6□□□□□ -1.03
NXT1-201ENST00000254998 PRR15LQ9BU68 103 aa8.58□□□□□ -1.04
NXT1-201ENST00000254998 LINC01558Q9Y6Z2 57 aa8.58□□□□□ -1.04
NXT1-201ENST00000254998 SMIM26A0A096LP01 95 aa8.56□□□□□ -1.04
NXT1-201ENST00000254998 PCP4P48539 62 aa8.55□□□□□ -1.04
NXT1-201ENST00000254998 KRTAP12-1P59990 96 aa8.55□□□□□ -1.04
NXT1-201ENST00000254998 KRTAP4-8A0A0G2JLE6 195 aa8.54□□□□□ -1.04
NXT1-201ENST00000254998 KRTAP4-8Q9BYQ9 185 aa8.54□□□□□ -1.04
NXT1-201ENST00000254998 SPRR2FQ96RM1 72 aa8.53□□□□□ -1.04
NXT1-201ENST00000254998 SPINT4Q6UDR6 99 aa8.52□□□□□ -1.05
NXT1-201ENST00000254998 MDN1Q9NU22 5596 aa8.48□□□□□ -1.05
NXT1-201ENST00000254998 A8MU10 97 aa8.44□□□□□ -1.06
NXT1-201ENST00000254998 SPRR2EP22531 72 aa8.34□□□□□ -1.07
NXT1-201ENST00000254998 SPRR2BP35325 72 aa8.34□□□□□ -1.07
NXT1-201ENST00000254998 SPRR2AP35326 72 aa8.34□□□□□ -1.07
NXT1-201ENST00000254998 UQCR11O14957 56 aa8.31□□□□□ -1.08
NXT1-201ENST00000254998 LCE1AQ5T7P2 110 aa8.3□□□□□ -1.08
NXT1-201ENST00000254998 V9GYY9 64 aa8.25□□□□□ -1.09
NXT1-201ENST00000254998 KRTAP20-1Q3LI63 56 aa8.23□□□□□ -1.09
NXT1-201ENST00000254998 Q1T7F1 81 aa8.21□□□□□ -1.1
NXT1-201ENST00000254998 RPS28P62857 69 aaKnown RBP8.14□□□□□ -1.11
NXT1-201ENST00000254998 C10orf95Q9H7T3 257 aa8.14□□□□□ -1.11
NXT1-201ENST00000254998 MIR22HGQ0VDD5 57 aa8.13□□□□□ -1.11
NXT1-201ENST00000254998 KRTAP2-3P0C7H8 128 aa8.12□□□□□ -1.11
NXT1-201ENST00000254998 KRTAP2-4Q9BYR9 128 aa8.12□□□□□ -1.11
NXT1-201ENST00000254998 PSPHP1O15172 72 aa8.11□□□□□ -1.11
NXT1-201ENST00000254998 KRTAP19-7Q3SYF9 63 aa8.11□□□□□ -1.11
NXT1-201ENST00000254998 TNP1P09430 55 aa8.06□□□□□ -1.12
NXT1-201ENST00000254998 SPRR2DP22532 72 aa8.06□□□□□ -1.12
NXT1-201ENST00000254998 MT1EP04732 61 aa8.02□□□□□ -1.13
NXT1-201ENST00000254998 KRTAP19-5Q3LI72 72 aa7.96□□□□□ -1.14
NXT1-201ENST00000254998 K7ERS5 55 aa7.93□□□□□ -1.14
NXT1-201ENST00000254998 LCE3AQ5TA76 89 aa7.91□□□□□ -1.14
NXT1-201ENST00000254998 KRTAP19-3Q7Z4W3 81 aa7.9□□□□□ -1.14
NXT1-201ENST00000254998 LCE5AQ5TCM9 118 aa7.89□□□□□ -1.15
NXT1-201ENST00000254998 LOC100996750A0A140TA64 210 aa7.87□□□□□ -1.15
NXT1-201ENST00000254998 KRTAP4-6Q9BYQ5 205 aa7.87□□□□□ -1.15
NXT1-201ENST00000254998 KRTAP2-2Q9BYT5 123 aa7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 90.4 ms