RNA–Protein interactions for RNA: ENST00000254719.9

RPA1-201, Transcript of replication protein A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPA1, Length 4,340 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA1-201ENST00000254719 CRIPTQ9P021 101 aa5.24□□□□□ -1.57
RPA1-201ENST00000254719 KRTAP16-1A8MUX0 517 aa5.23□□□□□ -1.57
RPA1-201ENST00000254719 LUZP6Q538Z0 58 aa5.21□□□□□ -1.58
RPA1-201ENST00000254719 LRP2P98164 4655 aa5.21□□□□□ -1.58
RPA1-201ENST00000254719 A0A1B0GU33 70 aa5.2□□□□□ -1.58
RPA1-201ENST00000254719 CSAG1Q6PB30 78 aa5.18□□□□□ -1.58
RPA1-201ENST00000254719 A0A1B0GVY2 172 aa5.14□□□□□ -1.59
RPA1-201ENST00000254719 LINC01554Q52M75 96 aa5.12□□□□□ -1.59
RPA1-201ENST00000254719 SPATA8Q6RVD6 105 aa5.12□□□□□ -1.59
RPA1-201ENST00000254719 MUC17Q685J3 4493 aa5.1□□□□□ -1.59
RPA1-201ENST00000254719 COX6B2Q6YFQ2 88 aa5.1□□□□□ -1.59
RPA1-201ENST00000254719 MUC2Q02817 5179 aa5.08□□□□□ -1.6
RPA1-201ENST00000254719 S4R3F8 94 aa5.06□□□□□ -1.6
RPA1-201ENST00000254719 H1FX-AS1Q4G0G2 97 aa5.04□□□□□ -1.6
RPA1-201ENST00000254719 Q5VSD8 79 aa5.04□□□□□ -1.6
RPA1-201ENST00000254719 SPINT4Q6UDR6 99 aa5.02□□□□□ -1.61
RPA1-201ENST00000254719 A8MUU9 505 aa5.02□□□□□ -1.61
RPA1-201ENST00000254719 C20orf166-AS1Q96NR2 134 aa5.01□□□□□ -1.61
RPA1-201ENST00000254719 RPL37P61927 97 aaKnown RBP5□□□□□ -1.61
RPA1-201ENST00000254719 KRTAP3-1Q9BYR8 98 aa4.99□□□□□ -1.61
RPA1-201ENST00000254719 A0A0D9SG42 100 aa4.99□□□□□ -1.61
RPA1-201ENST00000254719 NDUFAF8A1L188 74 aa4.99□□□□□ -1.61
RPA1-201ENST00000254719 CAMK2N1Q7Z7J9 78 aa4.97□□□□□ -1.61
RPA1-201ENST00000254719 KRTAP3-3Q9BYR6 98 aa4.97□□□□□ -1.61
RPA1-201ENST00000254719 KRTAP3-2Q9BYR7 98 aa4.97□□□□□ -1.61
RPA1-201ENST00000254719 PCLOQ9Y6V0 5065 aa4.93□□□□□ -1.62
RPA1-201ENST00000254719 ROMO1P60602 79 aa4.93□□□□□ -1.62
RPA1-201ENST00000254719 FLGP20930 4061 aaPredicted RBP4.91□□□□□ -1.62
RPA1-201ENST00000254719 HERC1Q15751 4861 aa4.9□□□□□ -1.63
RPA1-201ENST00000254719 KRTAP23-1A1A580 65 aa4.89□□□□□ -1.63
RPA1-201ENST00000254719 H0YAA0 97 aa4.87□□□□□ -1.63
RPA1-201ENST00000254719 HERC2O95714 4834 aa4.87□□□□□ -1.63
RPA1-201ENST00000254719 R4GN34 69 aa4.86□□□□□ -1.63
RPA1-201ENST00000254719 M0QZ58 72 aa4.85□□□□□ -1.63
RPA1-201ENST00000254719 KRTAP10-8P60410 259 aa4.82□□□□□ -1.64
RPA1-201ENST00000254719 C10orf95Q9H7T3 257 aa4.82□□□□□ -1.64
RPA1-201ENST00000254719 BIRC6Q9NR09 4857 aa4.82□□□□□ -1.64
RPA1-201ENST00000254719 MT1HL1P0DM35 61 aa4.81□□□□□ -1.64
RPA1-201ENST00000254719 P0C880 135 aa4.81□□□□□ -1.64
RPA1-201ENST00000254719 KRTAP25-1Q3LHN0 102 aa4.81□□□□□ -1.64
RPA1-201ENST00000254719 FAT4Q6V0I7 4981 aa4.76□□□□□ -1.65
RPA1-201ENST00000254719 KRTAP4-5Q9BYR2 181 aa4.76□□□□□ -1.65
RPA1-201ENST00000254719 XP32Q5T750 250 aa4.75□□□□□ -1.65
RPA1-201ENST00000254719 HMCN2Q8NDA2 5059 aa4.74□□□□□ -1.65
RPA1-201ENST00000254719 TPRXLQ17RH7 258 aa4.72□□□□□ -1.65
RPA1-201ENST00000254719 KRTAP19-2Q3LHN2 52 aa4.67□□□□□ -1.66
RPA1-201ENST00000254719 KRTAP10-6P60371 365 aaPredicted RBP4.66□□□□□ -1.66
RPA1-201ENST00000254719 RNF213Q63HN8 5207 aa4.65□□□□□ -1.66
RPA1-201ENST00000254719 KRTAP13-4Q3LI77 160 aa4.64□□□□□ -1.67
RPA1-201ENST00000254719 M0R2T5 61 aa4.63□□□□□ -1.67
RPA1-201ENST00000254719 UBR4Q5T4S7 5183 aa4.6□□□□□ -1.67
RPA1-201ENST00000254719 KRTAP4-1Q9BYQ7 146 aa4.6□□□□□ -1.67
RPA1-201ENST00000254719 PLAC4Q8WY50 150 aa4.57□□□□□ -1.68
RPA1-201ENST00000254719 PP632Q6XCG6 107 aa4.55□□□□□ -1.68
RPA1-201ENST00000254719 TNP1P09430 55 aa4.48□□□□□ -1.69
RPA1-201ENST00000254719 KRTAP12-2P59991 146 aa4.48□□□□□ -1.69
RPA1-201ENST00000254719 LORP23490 312 aaPredicted RBP4.43□□□□□ -1.7
RPA1-201ENST00000254719 KRTAP15-1Q3LI76 137 aa4.41□□□□□ -1.7
RPA1-201ENST00000254719 KRTAP12-1P59990 96 aa4.37□□□□□ -1.71
RPA1-201ENST00000254719 LCE2CQ5TA81 110 aa4.31□□□□□ -1.72
RPA1-201ENST00000254719 LCE2DQ5TA82 110 aaPredicted RBP4.31□□□□□ -1.72
RPA1-201ENST00000254719 KRTAP10-10P60014 251 aa4.19□□□□□ -1.74
RPA1-201ENST00000254719 PRO2289Q9P1D8 64 aa4.18□□□□□ -1.74
RPA1-201ENST00000254719 USH2AO75445 5202 aa4.16□□□□□ -1.74
RPA1-201ENST00000254719 KRTAP19-1Q8IUB9 90 aa4.06□□□□□ -1.76
RPA1-201ENST00000254719 LCE2BO14633 110 aa4.04□□□□□ -1.76
RPA1-201ENST00000254719 KMT2DO14686 5537 aa4.03□□□□□ -1.76
RPA1-201ENST00000254719 KRTAP9-8Q9BYQ0 159 aa4.01□□□□□ -1.77
RPA1-201ENST00000254719 MT1HP80294 61 aa4□□□□□ -1.77
RPA1-201ENST00000254719 MT1FP04733 61 aa3.95□□□□□ -1.78
RPA1-201ENST00000254719 SPRR2GQ9BYE4 73 aa3.93□□□□□ -1.78
RPA1-201ENST00000254719 MT2AP02795 61 aa3.9□□□□□ -1.79
RPA1-201ENST00000254719 MT1BP07438 61 aa3.84□□□□□ -1.79
RPA1-201ENST00000254719 LCE2AQ5TA79 106 aaPredicted RBP3.82□□□□□ -1.8
RPA1-201ENST00000254719 KRTAP9-3Q9BYQ3 159 aa3.81□□□□□ -1.8
RPA1-201ENST00000254719 KRTAP10-5P60370 271 aa3.81□□□□□ -1.8
RPA1-201ENST00000254719 KRTAP10-12P60413 245 aa3.81□□□□□ -1.8
RPA1-201ENST00000254719 KRTAP19-8Q3LI54 63 aa3.79□□□□□ -1.8
RPA1-201ENST00000254719 SSPOA2VEC9 5147 aa3.79□□□□□ -1.8
RPA1-201ENST00000254719 MT1XP80297 61 aa3.78□□□□□ -1.8
RPA1-201ENST00000254719 INE1O15225 51 aa3.76□□□□□ -1.81
RPA1-201ENST00000254719 KRTAP12-3P60328 96 aa3.74□□□□□ -1.81
RPA1-201ENST00000254719 SPRR5A0A1B0GTR4 108 aa3.73□□□□□ -1.81
RPA1-201ENST00000254719 LCE3AQ5TA76 89 aa3.72□□□□□ -1.81
RPA1-201ENST00000254719 KRTAP19-4Q3LI73 84 aa3.67□□□□□ -1.82
RPA1-201ENST00000254719 KRTAP10-7P60409 375 aaPredicted RBP3.67□□□□□ -1.82
RPA1-201ENST00000254719 KRTAP8-1Q8IUC2 63 aa3.6□□□□□ -1.83
RPA1-201ENST00000254719 FSIP2Q5CZC0 6907 aa3.59□□□□□ -1.84
RPA1-201ENST00000254719 FCGBPQ9Y6R7 5405 aaPredicted RBP3.57□□□□□ -1.84
RPA1-201ENST00000254719 OBSCNQ5VST9 7968 aa3.56□□□□□ -1.84
RPA1-201ENST00000254719 KRTAP4-8A0A0G2JLE6 195 aa3.5□□□□□ -1.85
RPA1-201ENST00000254719 KRTAP4-8Q9BYQ9 185 aa3.5□□□□□ -1.85
RPA1-201ENST00000254719 MUC12Q9UKN1 5478 aa3.48□□□□□ -1.85
RPA1-201ENST00000254719 KRTAP9-6A8MVA2 160 aa3.46□□□□□ -1.86
RPA1-201ENST00000254719 KRTAP19-7Q3SYF9 63 aa3.43□□□□□ -1.86
RPA1-201ENST00000254719 DSTQ03001 7570 aaKnown RBP3.42□□□□□ -1.86
RPA1-201ENST00000254719 KRTAP9-2Q9BYQ4 174 aa3.41□□□□□ -1.86
RPA1-201ENST00000254719 KRTAP19-5Q3LI72 72 aa3.38□□□□□ -1.87
RPA1-201ENST00000254719 KRTAP9-6A0A140TA67 174 aa3.38□□□□□ -1.87
RPA1-201ENST00000254719 LCE3CQ5T5A8 94 aa3.37□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 88.5 ms