RNA–Protein interactions for RNA: ENST00000243914.7

CTCFL-201, Transcript of CCCTC-binding factor like, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CTCFL, Length 3,567 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-201ENST00000243914 A0A0A0MQY5 61 aa5.93□□□□□ -1.46
CTCFL-201ENST00000243914 MT1HL1P0DM35 61 aa5.92□□□□□ -1.46
CTCFL-201ENST00000243914 A8MUU9 505 aa5.87□□□□□ -1.47
CTCFL-201ENST00000243914 ACYP2P14621 99 aa5.87□□□□□ -1.47
CTCFL-201ENST00000243914 C20orf166-AS1Q96NR2 134 aa5.87□□□□□ -1.47
CTCFL-201ENST00000243914 DMAC1Q96GE9 116 aa5.85□□□□□ -1.47
CTCFL-201ENST00000243914 HERC1Q15751 4861 aa5.84□□□□□ -1.47
CTCFL-201ENST00000243914 MUC2Q02817 5179 aa5.84□□□□□ -1.47
CTCFL-201ENST00000243914 XP32Q5T750 250 aa5.83□□□□□ -1.48
CTCFL-201ENST00000243914 PCLOQ9Y6V0 5065 aa5.82□□□□□ -1.48
CTCFL-201ENST00000243914 KRTAP3-1Q9BYR8 98 aa5.8□□□□□ -1.48
CTCFL-201ENST00000243914 BIRC6Q9NR09 4857 aa5.79□□□□□ -1.48
CTCFL-201ENST00000243914 MIR22HGQ0VDD5 57 aa5.77□□□□□ -1.49
CTCFL-201ENST00000243914 LINC01558Q9Y6Z2 57 aa5.76□□□□□ -1.49
CTCFL-201ENST00000243914 J3QL48 77 aa5.75□□□□□ -1.49
CTCFL-201ENST00000243914 A0A1B0GU69 56 aa5.74□□□□□ -1.49
CTCFL-201ENST00000243914 RPL37P61927 97 aaKnown RBP5.74□□□□□ -1.49
CTCFL-201ENST00000243914 ROMO1P60602 79 aa5.69□□□□□ -1.5
CTCFL-201ENST00000243914 SPINT4Q6UDR6 99 aa5.68□□□□□ -1.5
CTCFL-201ENST00000243914 NDUFAF8A1L188 74 aa5.65□□□□□ -1.5
CTCFL-201ENST00000243914 COX6B2Q6YFQ2 88 aa5.65□□□□□ -1.5
CTCFL-201ENST00000243914 RNF213Q63HN8 5207 aa5.61□□□□□ -1.51
CTCFL-201ENST00000243914 UQCR11O14957 56 aa5.61□□□□□ -1.51
CTCFL-201ENST00000243914 TPRXLQ17RH7 258 aa5.59□□□□□ -1.51
CTCFL-201ENST00000243914 P0C880 135 aa5.58□□□□□ -1.52
CTCFL-201ENST00000243914 SPATA8Q6RVD6 105 aa5.55□□□□□ -1.52
CTCFL-201ENST00000243914 UBR4Q5T4S7 5183 aa5.54□□□□□ -1.52
CTCFL-201ENST00000243914 FAT4Q6V0I7 4981 aa5.54□□□□□ -1.52
CTCFL-201ENST00000243914 KRTAP4-1Q9BYQ7 146 aa5.54□□□□□ -1.52
CTCFL-201ENST00000243914 KRTAP3-3Q9BYR6 98 aa5.54□□□□□ -1.52
CTCFL-201ENST00000243914 MUC17Q685J3 4493 aa5.53□□□□□ -1.52
CTCFL-201ENST00000243914 S4R3F8 94 aa5.52□□□□□ -1.53
CTCFL-201ENST00000243914 HMCN2Q8NDA2 5059 aa5.52□□□□□ -1.53
CTCFL-201ENST00000243914 KRTAP25-1Q3LHN0 102 aa5.51□□□□□ -1.53
CTCFL-201ENST00000243914 A0A1B0GU33 70 aa5.46□□□□□ -1.54
CTCFL-201ENST00000243914 H0YAA0 97 aa5.45□□□□□ -1.54
CTCFL-201ENST00000243914 H1FX-AS1Q4G0G2 97 aa5.45□□□□□ -1.54
CTCFL-201ENST00000243914 A0A0D9SG42 100 aa5.45□□□□□ -1.54
CTCFL-201ENST00000243914 SEC61BP60468 96 aaKnown RBP5.43□□□□□ -1.54
CTCFL-201ENST00000243914 LUZP6Q538Z0 58 aa5.4□□□□□ -1.55
CTCFL-201ENST00000243914 KRTAP10-6P60371 365 aaPredicted RBP5.39□□□□□ -1.55
CTCFL-201ENST00000243914 KRTAP13-4Q3LI77 160 aa5.39□□□□□ -1.55
CTCFL-201ENST00000243914 KRTAP3-2Q9BYR7 98 aa5.37□□□□□ -1.55
CTCFL-201ENST00000243914 C10orf95Q9H7T3 257 aa5.36□□□□□ -1.55
CTCFL-201ENST00000243914 K7ERS5 55 aa5.3□□□□□ -1.56
CTCFL-201ENST00000243914 LORP23490 312 aaPredicted RBP5.27□□□□□ -1.57
CTCFL-201ENST00000243914 FLGP20930 4061 aaPredicted RBP5.25□□□□□ -1.57
CTCFL-201ENST00000243914 KRTAP19-2Q3LHN2 52 aa5.23□□□□□ -1.57
CTCFL-201ENST00000243914 M0QZ58 72 aa5.2□□□□□ -1.58
CTCFL-201ENST00000243914 KRTAP12-2P59991 146 aa5.18□□□□□ -1.58
CTCFL-201ENST00000243914 R4GN34 69 aa5.17□□□□□ -1.58
CTCFL-201ENST00000243914 M0R2T5 61 aa5.14□□□□□ -1.59
CTCFL-201ENST00000243914 KRTAP12-1P59990 96 aa5.09□□□□□ -1.59
CTCFL-201ENST00000243914 LCE2CQ5TA81 110 aa5.09□□□□□ -1.6
CTCFL-201ENST00000243914 KRTAP15-1Q3LI76 137 aa5.05□□□□□ -1.6
CTCFL-201ENST00000243914 MT1HP80294 61 aa4.99□□□□□ -1.61
CTCFL-201ENST00000243914 USH2AO75445 5202 aa4.92□□□□□ -1.62
CTCFL-201ENST00000243914 KRTAP10-10P60014 251 aa4.91□□□□□ -1.62
CTCFL-201ENST00000243914 CAMK2N1Q7Z7J9 78 aa4.91□□□□□ -1.62
CTCFL-201ENST00000243914 MT1FP04733 61 aa4.87□□□□□ -1.63
CTCFL-201ENST00000243914 FSIP2Q5CZC0 6907 aa4.85□□□□□ -1.63
CTCFL-201ENST00000243914 MT2AP02795 61 aa4.84□□□□□ -1.63
CTCFL-201ENST00000243914 KRTAP9-8Q9BYQ0 159 aa4.81□□□□□ -1.64
CTCFL-201ENST00000243914 KRTAP19-1Q8IUB9 90 aa4.8□□□□□ -1.64
CTCFL-201ENST00000243914 PLAC4Q8WY50 150 aa4.77□□□□□ -1.65
CTCFL-201ENST00000243914 SPRR2GQ9BYE4 73 aa4.7□□□□□ -1.66
CTCFL-201ENST00000243914 KMT2DO14686 5537 aa4.67□□□□□ -1.66
CTCFL-201ENST00000243914 KRTAP9-3Q9BYQ3 159 aa4.6□□□□□ -1.67
CTCFL-201ENST00000243914 MT1BP07438 61 aa4.59□□□□□ -1.67
CTCFL-201ENST00000243914 TNP1P09430 55 aa4.57□□□□□ -1.68
CTCFL-201ENST00000243914 LCE2AQ5TA79 106 aaPredicted RBP4.55□□□□□ -1.68
CTCFL-201ENST00000243914 LCE2BO14633 110 aa4.55□□□□□ -1.68
CTCFL-201ENST00000243914 KRTAP19-8Q3LI54 63 aa4.51□□□□□ -1.69
CTCFL-201ENST00000243914 KRTAP10-5P60370 271 aa4.5□□□□□ -1.69
CTCFL-201ENST00000243914 MT1XP80297 61 aa4.5□□□□□ -1.69
CTCFL-201ENST00000243914 SSPOA2VEC9 5147 aa4.47□□□□□ -1.69
CTCFL-201ENST00000243914 LCE3AQ5TA76 89 aa4.47□□□□□ -1.69
CTCFL-201ENST00000243914 KRTAP10-7P60409 375 aaPredicted RBP4.44□□□□□ -1.7
CTCFL-201ENST00000243914 PP632Q6XCG6 107 aa4.37□□□□□ -1.71
CTCFL-201ENST00000243914 KRTAP10-12P60413 245 aa4.33□□□□□ -1.72
CTCFL-201ENST00000243914 KRTAP4-8A0A0G2JLE6 195 aa4.32□□□□□ -1.72
CTCFL-201ENST00000243914 KRTAP4-8Q9BYQ9 185 aa4.32□□□□□ -1.72
CTCFL-201ENST00000243914 PRO2289Q9P1D8 64 aa4.32□□□□□ -1.72
CTCFL-201ENST00000243914 KRTAP12-3P60328 96 aa4.21□□□□□ -1.74
CTCFL-201ENST00000243914 FCGBPQ9Y6R7 5405 aaPredicted RBP4.19□□□□□ -1.74
CTCFL-201ENST00000243914 MUC12Q9UKN1 5478 aa4.19□□□□□ -1.74
CTCFL-201ENST00000243914 KRTAP19-5Q3LI72 72 aa4.18□□□□□ -1.74
CTCFL-201ENST00000243914 KRTAP8-1Q8IUC2 63 aa4.18□□□□□ -1.74
CTCFL-201ENST00000243914 KRTAP23-1A1A580 65 aa4.17□□□□□ -1.74
CTCFL-201ENST00000243914 MACF1Q9UPN3 7388 aaKnown RBP4.13□□□□□ -1.75
CTCFL-201ENST00000243914 DSTQ03001 7570 aaKnown RBP4.13□□□□□ -1.75
CTCFL-201ENST00000243914 SYNE2Q8WXH0 6885 aaKnown RBP4.12□□□□□ -1.75
CTCFL-201ENST00000243914 KRTAP4-7Q9BYR0 210 aa4.06□□□□□ -1.76
CTCFL-201ENST00000243914 KRTAP19-6Q3LI70 58 aa4.01□□□□□ -1.77
CTCFL-201ENST00000243914 KRTAP19-7Q3SYF9 63 aa4.01□□□□□ -1.77
CTCFL-201ENST00000243914 INE1O15225 51 aa3.99□□□□□ -1.77
CTCFL-201ENST00000243914 SPRR5A0A1B0GTR4 108 aa3.97□□□□□ -1.77
CTCFL-201ENST00000243914 MDN1Q9NU22 5596 aa3.94□□□□□ -1.78
CTCFL-201ENST00000243914 KRTAP9-2Q9BYQ4 174 aa3.92□□□□□ -1.78
CTCFL-201ENST00000243914 LCE3CQ5T5A8 94 aa3.91□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms