RNA–Protein interactions for RNA: ENST00000243563.7

SNRPA-201, Transcript of small nuclear ribonucleoprotein polypeptide A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRPA, Length 1,621 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA-201ENST00000243563 LORP23490 312 aaPredicted RBP9.68□□□□□ -0.86
SNRPA-201ENST00000243563 NDUFC1O43677 76 aa9.67□□□□□ -0.86
SNRPA-201ENST00000243563 KRTAP9-8Q9BYQ0 159 aa9.59□□□□□ -0.87
SNRPA-201ENST00000243563 ACYP2P14621 99 aa9.58□□□□□ -0.88
SNRPA-201ENST00000243563 CSAG1Q6PB30 78 aa9.53□□□□□ -0.88
SNRPA-201ENST00000243563 MT2AP02795 61 aa9.52□□□□□ -0.89
SNRPA-201ENST00000243563 PCP4P48539 62 aa9.51□□□□□ -0.89
SNRPA-201ENST00000243563 MT1FP04733 61 aa9.47□□□□□ -0.89
SNRPA-201ENST00000243563 COA5Q86WW8 74 aa9.46□□□□□ -0.89
SNRPA-201ENST00000243563 CHKB-CPT1BH3BT56 60 aa9.41□□□□□ -0.9
SNRPA-201ENST00000243563 TMEM258P61165 79 aa9.41□□□□□ -0.9
SNRPA-201ENST00000243563 ATP5EP56381 51 aaPredicted RBP9.35□□□□□ -0.91
SNRPA-201ENST00000243563 KRTAP10-10P60014 251 aa9.35□□□□□ -0.91
SNRPA-201ENST00000243563 H0YAA0 97 aa9.27□□□□□ -0.93
SNRPA-201ENST00000243563 ADM2Q7Z4H4 148 aa9.27□□□□□ -0.93
SNRPA-201ENST00000243563 SPTSSBQ8NFR3 76 aa9.27□□□□□ -0.93
SNRPA-201ENST00000243563 KRTAP9-3Q9BYQ3 159 aa9.26□□□□□ -0.93
SNRPA-201ENST00000243563 KRTAP3-2Q9BYR7 98 aa9.24□□□□□ -0.93
SNRPA-201ENST00000243563 P0C880 135 aa9.2□□□□□ -0.94
SNRPA-201ENST00000243563 LCE2DQ5TA82 110 aaPredicted RBP9.18□□□□□ -0.94
SNRPA-201ENST00000243563 KRTAP9-2Q9BYQ4 174 aa9.13□□□□□ -0.95
SNRPA-201ENST00000243563 SERP1Q9Y6X1 66 aa9.13□□□□□ -0.95
SNRPA-201ENST00000243563 KRTAP19-1Q8IUB9 90 aa9.12□□□□□ -0.95
SNRPA-201ENST00000243563 LCE2BO14633 110 aa9.11□□□□□ -0.95
SNRPA-201ENST00000243563 SPRR2GQ9BYE4 73 aa9.03□□□□□ -0.96
SNRPA-201ENST00000243563 CRIPTQ9P021 101 aa9□□□□□ -0.97
SNRPA-201ENST00000243563 USH2AO75445 5202 aa8.99□□□□□ -0.97
SNRPA-201ENST00000243563 M0QZ58 72 aa8.92□□□□□ -0.98
SNRPA-201ENST00000243563 LINC01558Q9Y6Z2 57 aa8.91□□□□□ -0.98
SNRPA-201ENST00000243563 R4GN34 69 aa8.91□□□□□ -0.98
SNRPA-201ENST00000243563 SEC61GP60059 68 aa8.91□□□□□ -0.98
SNRPA-201ENST00000243563 A0A1B0GU69 56 aa8.9□□□□□ -0.99
SNRPA-201ENST00000243563 KRTAP13-4Q3LI77 160 aa8.9□□□□□ -0.99
SNRPA-201ENST00000243563 KRTAP19-8Q3LI54 63 aa8.89□□□□□ -0.99
SNRPA-201ENST00000243563 MT1BP07438 61 aa8.87□□□□□ -0.99
SNRPA-201ENST00000243563 RPS28P62857 69 aaKnown RBP8.85□□□□□ -0.99
SNRPA-201ENST00000243563 FSIP2Q5CZC0 6907 aa8.85□□□□□ -0.99
SNRPA-201ENST00000243563 SSPOA2VEC9 5147 aa8.81□□□□□ -1
SNRPA-201ENST00000243563 SMIM26A0A096LP01 95 aa8.8□□□□□ -1
SNRPA-201ENST00000243563 A0A1B0GU33 70 aa8.79□□□□□ -1
SNRPA-201ENST00000243563 LINC01554Q52M75 96 aa8.78□□□□□ -1
SNRPA-201ENST00000243563 Q5VV11 94 aa8.77□□□□□ -1.01
SNRPA-201ENST00000243563 Q1T7F1 81 aa8.76□□□□□ -1.01
SNRPA-201ENST00000243563 SPATA8Q6RVD6 105 aa8.76□□□□□ -1.01
SNRPA-201ENST00000243563 PRR15LQ9BU68 103 aa8.76□□□□□ -1.01
SNRPA-201ENST00000243563 CRCT1Q9UGL9 99 aa8.7□□□□□ -1.02
SNRPA-201ENST00000243563 PSPHP1O15172 72 aa8.69□□□□□ -1.02
SNRPA-201ENST00000243563 V9GYY9 64 aa8.68□□□□□ -1.02
SNRPA-201ENST00000243563 A0A0D9SG42 100 aa8.62□□□□□ -1.03
SNRPA-201ENST00000243563 SVIPQ8NHG7 77 aa8.62□□□□□ -1.03
SNRPA-201ENST00000243563 KRTAP19-6Q3LI70 58 aa8.61□□□□□ -1.03
SNRPA-201ENST00000243563 A8MU10 97 aa8.59□□□□□ -1.03
SNRPA-201ENST00000243563 KRTAP9-6A0A140TA67 174 aa8.58□□□□□ -1.04
SNRPA-201ENST00000243563 PLAC4Q8WY50 150 aa8.54□□□□□ -1.04
SNRPA-201ENST00000243563 A6NN06 94 aa8.54□□□□□ -1.04
SNRPA-201ENST00000243563 UQCR11O14957 56 aa8.51□□□□□ -1.05
SNRPA-201ENST00000243563 FCGBPQ9Y6R7 5405 aaPredicted RBP8.48□□□□□ -1.05
SNRPA-201ENST00000243563 KRTAP12-1P59990 96 aa8.47□□□□□ -1.05
SNRPA-201ENST00000243563 KRTAP10-5P60370 271 aa8.46□□□□□ -1.06
SNRPA-201ENST00000243563 MT1XP80297 61 aa8.46□□□□□ -1.06
SNRPA-201ENST00000243563 KRTAP12-2P59991 146 aa8.45□□□□□ -1.06
SNRPA-201ENST00000243563 MIR22HGQ0VDD5 57 aa8.42□□□□□ -1.06
SNRPA-201ENST00000243563 SPINT4Q6UDR6 99 aa8.41□□□□□ -1.06
SNRPA-201ENST00000243563 A6NED7 52 aa8.36□□□□□ -1.07
SNRPA-201ENST00000243563 CAMK2N1Q7Z7J9 78 aa8.29□□□□□ -1.08
SNRPA-201ENST00000243563 PRO2289Q9P1D8 64 aa8.26□□□□□ -1.09
SNRPA-201ENST00000243563 CDC42SE1Q9NRR8 79 aa8.14□□□□□ -1.11
SNRPA-201ENST00000243563 KRTAP10-7P60409 375 aaPredicted RBP8.11□□□□□ -1.11
SNRPA-201ENST00000243563 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.1□□□□□ -1.11
SNRPA-201ENST00000243563 MACF1Q9UPN3 7388 aaKnown RBP8.1□□□□□ -1.11
SNRPA-201ENST00000243563 C10orf95Q9H7T3 257 aa8.07□□□□□ -1.12
SNRPA-201ENST00000243563 K7ERS5 55 aa8□□□□□ -1.13
SNRPA-201ENST00000243563 KRTAP10-12P60413 245 aa8□□□□□ -1.13
SNRPA-201ENST00000243563 KMT2DO14686 5537 aa7.99□□□□□ -1.13
SNRPA-201ENST00000243563 KRTAP4-8A0A0G2JLE6 195 aa7.93□□□□□ -1.14
SNRPA-201ENST00000243563 BRK1Q8WUW1 75 aa7.93□□□□□ -1.14
SNRPA-201ENST00000243563 KRTAP4-8Q9BYQ9 185 aa7.93□□□□□ -1.14
SNRPA-201ENST00000243563 SYNE2Q8WXH0 6885 aaKnown RBP7.89□□□□□ -1.15
SNRPA-201ENST00000243563 TNP1P09430 55 aa7.79□□□□□ -1.16
SNRPA-201ENST00000243563 KRTAP9-7A8MTY7 169 aa7.78□□□□□ -1.16
SNRPA-201ENST00000243563 KRTAP8-1Q8IUC2 63 aa7.75□□□□□ -1.17
SNRPA-201ENST00000243563 KRTAP6-3Q3LI67 103 aa7.73□□□□□ -1.17
SNRPA-201ENST00000243563 ROMO1P60602 79 aa7.7□□□□□ -1.18
SNRPA-201ENST00000243563 LCE3AQ5TA76 89 aa7.67□□□□□ -1.18
SNRPA-201ENST00000243563 KRTAP5-9P26371 169 aa7.66□□□□□ -1.18
SNRPA-201ENST00000243563 KRTAP25-1Q3LHN0 102 aa7.66□□□□□ -1.18
SNRPA-201ENST00000243563 SPRR2FQ96RM1 72 aa7.6□□□□□ -1.19
SNRPA-201ENST00000243563 KRTAP19-7Q3SYF9 63 aa7.56□□□□□ -1.2
SNRPA-201ENST00000243563 MUC12Q9UKN1 5478 aa7.54□□□□□ -1.2
SNRPA-201ENST00000243563 KRTAP19-5Q3LI72 72 aa7.52□□□□□ -1.2
SNRPA-201ENST00000243563 PRO0628Q9UI54 55 aa7.47□□□□□ -1.21
SNRPA-201ENST00000243563 PMAIP1Q13794 54 aa7.45□□□□□ -1.22
SNRPA-201ENST00000243563 MT1EP04732 61 aa7.43□□□□□ -1.22
SNRPA-201ENST00000243563 MDN1Q9NU22 5596 aa7.39□□□□□ -1.23
SNRPA-201ENST00000243563 KRTAP23-1A1A580 65 aa7.37□□□□□ -1.23
SNRPA-201ENST00000243563 LCE1AQ5T7P2 110 aa7.36□□□□□ -1.23
SNRPA-201ENST00000243563 SPRR2EP22531 72 aa7.33□□□□□ -1.24
SNRPA-201ENST00000243563 SPRR2BP35325 72 aa7.33□□□□□ -1.24
SNRPA-201ENST00000243563 SPRR2AP35326 72 aa7.33□□□□□ -1.24
SNRPA-201ENST00000243563 KRTAP12-3P60328 96 aa7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 334 ms