RNA–Protein interactions for RNA: ENST00000243082.4

HOXC11-201, Transcript of homeobox C11, humanhuman

TSL 3 BASIC

Gene HOXC11, Length 2,039 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC11-201ENST00000243082 SPTSSBQ8NFR3 76 aa9.51□□□□□ -0.89
HOXC11-201ENST00000243082 LPAP08519 4548 aa9.5□□□□□ -0.89
HOXC11-201ENST00000243082 CDC42SE1Q9NRR8 79 aa9.45□□□□□ -0.9
HOXC11-201ENST00000243082 KRTAP3-3Q9BYR6 98 aa9.38□□□□□ -0.91
HOXC11-201ENST00000243082 KRTAP3-2Q9BYR7 98 aa9.38□□□□□ -0.91
HOXC11-201ENST00000243082 SEC61GP60059 68 aa9.36□□□□□ -0.91
HOXC11-201ENST00000243082 UQCR11O14957 56 aa9.32□□□□□ -0.92
HOXC11-201ENST00000243082 SPATA8Q6RVD6 105 aa9.29□□□□□ -0.92
HOXC11-201ENST00000243082 S4R3F8 94 aa9.29□□□□□ -0.92
HOXC11-201ENST00000243082 LCE2DQ5TA82 110 aaPredicted RBP9.28□□□□□ -0.92
HOXC11-201ENST00000243082 H1FX-AS1Q4G0G2 97 aa9.27□□□□□ -0.92
HOXC11-201ENST00000243082 MIR22HGQ0VDD5 57 aa9.26□□□□□ -0.93
HOXC11-201ENST00000243082 SEC61BP60468 96 aaKnown RBP9.25□□□□□ -0.93
HOXC11-201ENST00000243082 RBM12B-AS1Q9P1G2 102 aa9.23□□□□□ -0.93
HOXC11-201ENST00000243082 PMAIP1Q13794 54 aa9.21□□□□□ -0.93
HOXC11-201ENST00000243082 A0A1B0GU33 70 aa9.17□□□□□ -0.94
HOXC11-201ENST00000243082 MUC17Q685J3 4493 aa9.16□□□□□ -0.94
HOXC11-201ENST00000243082 PCLOQ9Y6V0 5065 aa9.16□□□□□ -0.94
HOXC11-201ENST00000243082 KRTAP4-1Q9BYQ7 146 aa9.15□□□□□ -0.94
HOXC11-201ENST00000243082 A6NN06 94 aa9.14□□□□□ -0.95
HOXC11-201ENST00000243082 H0YAA0 97 aa9.12□□□□□ -0.95
HOXC11-201ENST00000243082 KRTAP10-6P60371 365 aaPredicted RBP9.12□□□□□ -0.95
HOXC11-201ENST00000243082 HERC1Q15751 4861 aa9.06□□□□□ -0.96
HOXC11-201ENST00000243082 CSAG1Q6PB30 78 aa9.02□□□□□ -0.97
HOXC11-201ENST00000243082 HMCN2Q8NDA2 5059 aa8.99□□□□□ -0.97
HOXC11-201ENST00000243082 P0C880 135 aa8.98□□□□□ -0.97
HOXC11-201ENST00000243082 KRTAP19-2Q3LHN2 52 aa8.97□□□□□ -0.97
HOXC11-201ENST00000243082 ADM2Q7Z4H4 148 aa8.95□□□□□ -0.98
HOXC11-201ENST00000243082 KRTAP13-4Q3LI77 160 aa8.93□□□□□ -0.98
HOXC11-201ENST00000243082 KTN1-AS1Q86SY8 53 aa8.92□□□□□ -0.98
HOXC11-201ENST00000243082 MUC2Q02817 5179 aa8.88□□□□□ -0.99
HOXC11-201ENST00000243082 A0A0D9SG42 100 aa8.77□□□□□ -1.01
HOXC11-201ENST00000243082 FLGP20930 4061 aaPredicted RBP8.74□□□□□ -1.01
HOXC11-201ENST00000243082 K7ERS5 55 aa8.71□□□□□ -1.02
HOXC11-201ENST00000243082 M0QZ58 72 aa8.7□□□□□ -1.02
HOXC11-201ENST00000243082 PRAC1Q96KF2 57 aa8.64□□□□□ -1.03
HOXC11-201ENST00000243082 H3BS24 57 aa8.61□□□□□ -1.03
HOXC11-201ENST00000243082 LORP23490 312 aaPredicted RBP8.61□□□□□ -1.03
HOXC11-201ENST00000243082 LCE2CQ5TA81 110 aa8.6□□□□□ -1.03
HOXC11-201ENST00000243082 KRTAP12-2P59991 146 aa8.59□□□□□ -1.03
HOXC11-201ENST00000243082 KRTAP12-1P59990 96 aa8.58□□□□□ -1.04
HOXC11-201ENST00000243082 R4GN34 69 aa8.58□□□□□ -1.04
HOXC11-201ENST00000243082 RNF213Q63HN8 5207 aa8.56□□□□□ -1.04
HOXC11-201ENST00000243082 UBR4Q5T4S7 5183 aa8.56□□□□□ -1.04
HOXC11-201ENST00000243082 SPINT4Q6UDR6 99 aa8.52□□□□□ -1.05
HOXC11-201ENST00000243082 LINC01554Q52M75 96 aa8.47□□□□□ -1.05
HOXC11-201ENST00000243082 ROMO1P60602 79 aa8.47□□□□□ -1.05
HOXC11-201ENST00000243082 FAT4Q6V0I7 4981 aa8.47□□□□□ -1.05
HOXC11-201ENST00000243082 MT1HP80294 61 aa8.38□□□□□ -1.07
HOXC11-201ENST00000243082 KRTAP25-1Q3LHN0 102 aa8.32□□□□□ -1.08
HOXC11-201ENST00000243082 CRIPTQ9P021 101 aa8.32□□□□□ -1.08
HOXC11-201ENST00000243082 M0R2T5 61 aa8.29□□□□□ -1.08
HOXC11-201ENST00000243082 MT2AP02795 61 aa8.13□□□□□ -1.11
HOXC11-201ENST00000243082 KRTAP9-8Q9BYQ0 159 aa8.13□□□□□ -1.11
HOXC11-201ENST00000243082 SPRR2GQ9BYE4 73 aa8.12□□□□□ -1.11
HOXC11-201ENST00000243082 C10orf95Q9H7T3 257 aa8.12□□□□□ -1.11
HOXC11-201ENST00000243082 MT1FP04733 61 aa8.11□□□□□ -1.11
HOXC11-201ENST00000243082 KRTAP19-1Q8IUB9 90 aa8.11□□□□□ -1.11
HOXC11-201ENST00000243082 KRTAP10-10P60014 251 aa8.07□□□□□ -1.12
HOXC11-201ENST00000243082 CAMK2N1Q7Z7J9 78 aa8.07□□□□□ -1.12
HOXC11-201ENST00000243082 LCE2BO14633 110 aa8.06□□□□□ -1.12
HOXC11-201ENST00000243082 LCE2AQ5TA79 106 aaPredicted RBP7.91□□□□□ -1.14
HOXC11-201ENST00000243082 PLAC4Q8WY50 150 aa7.9□□□□□ -1.14
HOXC11-201ENST00000243082 KRTAP19-8Q3LI54 63 aa7.85□□□□□ -1.15
HOXC11-201ENST00000243082 KRTAP9-3Q9BYQ3 159 aa7.82□□□□□ -1.16
HOXC11-201ENST00000243082 MT1BP07438 61 aa7.76□□□□□ -1.17
HOXC11-201ENST00000243082 A0A0A0MQY5 61 aa7.73□□□□□ -1.17
HOXC11-201ENST00000243082 TNP1P09430 55 aa7.73□□□□□ -1.17
HOXC11-201ENST00000243082 PP632Q6XCG6 107 aa7.67□□□□□ -1.18
HOXC11-201ENST00000243082 KRTAP10-5P60370 271 aa7.59□□□□□ -1.19
HOXC11-201ENST00000243082 MT1XP80297 61 aa7.59□□□□□ -1.19
HOXC11-201ENST00000243082 KRTAP23-1A1A580 65 aa7.58□□□□□ -1.2
HOXC11-201ENST00000243082 KRTAP15-1Q3LI76 137 aa7.47□□□□□ -1.21
HOXC11-201ENST00000243082 LCE3AQ5TA76 89 aa7.4□□□□□ -1.23
HOXC11-201ENST00000243082 PRO2289Q9P1D8 64 aa7.37□□□□□ -1.23
HOXC11-201ENST00000243082 USH2AO75445 5202 aa7.33□□□□□ -1.24
HOXC11-201ENST00000243082 KRTAP10-7P60409 375 aaPredicted RBP7.32□□□□□ -1.24
HOXC11-201ENST00000243082 KRTAP10-12P60413 245 aa7.27□□□□□ -1.25
HOXC11-201ENST00000243082 KRTAP8-1Q8IUC2 63 aa7.24□□□□□ -1.25
HOXC11-201ENST00000243082 KRTAP12-3P60328 96 aa7.06□□□□□ -1.28
HOXC11-201ENST00000243082 SSPOA2VEC9 5147 aa7.06□□□□□ -1.28
HOXC11-201ENST00000243082 NDUFAF8A1L188 74 aa7.05□□□□□ -1.28
HOXC11-201ENST00000243082 SPRR5A0A1B0GTR4 108 aa7.01□□□□□ -1.29
HOXC11-201ENST00000243082 KMT2DO14686 5537 aa6.97□□□□□ -1.29
HOXC11-201ENST00000243082 KRTAP4-8A0A0G2JLE6 195 aa6.96□□□□□ -1.29
HOXC11-201ENST00000243082 KRTAP19-6Q3LI70 58 aa6.96□□□□□ -1.29
HOXC11-201ENST00000243082 KRTAP4-8Q9BYQ9 185 aa6.96□□□□□ -1.29
HOXC11-201ENST00000243082 KRTAP19-5Q3LI72 72 aa6.94□□□□□ -1.3
HOXC11-201ENST00000243082 FSIP2Q5CZC0 6907 aa6.88□□□□□ -1.31
HOXC11-201ENST00000243082 LUZP6Q538Z0 58 aa6.88□□□□□ -1.31
HOXC11-201ENST00000243082 KRTAP9-2Q9BYQ4 174 aa6.83□□□□□ -1.32
HOXC11-201ENST00000243082 KRTAP19-7Q3SYF9 63 aa6.77□□□□□ -1.33
HOXC11-201ENST00000243082 KRTAP9-6A0A140TA67 174 aa6.72□□□□□ -1.33
HOXC11-201ENST00000243082 FCGBPQ9Y6R7 5405 aaPredicted RBP6.67□□□□□ -1.34
HOXC11-201ENST00000243082 LCE3CQ5T5A8 94 aa6.64□□□□□ -1.35
HOXC11-201ENST00000243082 MT1EP04732 61 aa6.6□□□□□ -1.35
HOXC11-201ENST00000243082 MT1LQ93083 61 aa6.53□□□□□ -1.36
HOXC11-201ENST00000243082 KRTAP19-4Q3LI73 84 aa6.47□□□□□ -1.37
HOXC11-201ENST00000243082 KRTAP4-7Q9BYR0 210 aa6.45□□□□□ -1.38
HOXC11-201ENST00000243082 CRCT1Q9UGL9 99 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 85.9 ms