RNA–Protein interactions for RNA: ENST00000243040.10

PFDN5-201, Transcript of prefoldin subunit 5, humanhuman

TSL 1 (best)

Gene PFDN5, Length 564 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN5-201ENST00000243040 KRTAP3-3Q9BYR6 98 aa4.94□□□□□ -1.62
PFDN5-201ENST00000243040 A8MUN3 132 aa4.93□□□□□ -1.62
PFDN5-201ENST00000243040 FAM236AA0A1B0GUQ0 79 aa4.88□□□□□ -1.63
PFDN5-201ENST00000243040 FAM236BA0A1B0GV22 79 aa4.88□□□□□ -1.63
PFDN5-201ENST00000243040 SMIM20Q8N5G0 67 aa4.88□□□□□ -1.63
PFDN5-201ENST00000243040 TRAV7A0A075B6U4 112 aa4.86□□□□□ -1.63
PFDN5-201ENST00000243040 NDUFC1O43677 76 aa4.85□□□□□ -1.63
PFDN5-201ENST00000243040 KRTAP19-1Q8IUB9 90 aa4.85□□□□□ -1.63
PFDN5-201ENST00000243040 DMAC1Q96GE9 116 aa4.83□□□□□ -1.64
PFDN5-201ENST00000243040 H0YAA0 97 aa4.82□□□□□ -1.64
PFDN5-201ENST00000243040 KRTAP19-6Q3LI70 58 aa4.82□□□□□ -1.64
PFDN5-201ENST00000243040 FCGBPQ9Y6R7 5405 aaPredicted RBP4.81□□□□□ -1.64
PFDN5-201ENST00000243040 SPRR2GQ9BYE4 73 aa4.81□□□□□ -1.64
PFDN5-201ENST00000243040 CRIPTQ9P021 101 aa4.78□□□□□ -1.64
PFDN5-201ENST00000243040 KRTAP19-8Q3LI54 63 aa4.77□□□□□ -1.65
PFDN5-201ENST00000243040 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.74□□□□□ -1.65
PFDN5-201ENST00000243040 MT1BP07438 61 aa4.74□□□□□ -1.65
PFDN5-201ENST00000243040 SERP2Q8N6R1 65 aa4.74□□□□□ -1.65
PFDN5-201ENST00000243040 Q5VV11 94 aa4.73□□□□□ -1.65
PFDN5-201ENST00000243040 ACYP2P14621 99 aa4.72□□□□□ -1.65
PFDN5-201ENST00000243040 ADM2Q7Z4H4 148 aa4.72□□□□□ -1.65
PFDN5-201ENST00000243040 SNURFQ9Y675 71 aa4.72□□□□□ -1.65
PFDN5-201ENST00000243040 MACF1Q9UPN3 7388 aaKnown RBP4.7□□□□□ -1.66
PFDN5-201ENST00000243040 C20orf197Q8N268 126 aa4.69□□□□□ -1.66
PFDN5-201ENST00000243040 SPANXA2-OT1Q8N9U9 137 aa4.69□□□□□ -1.66
PFDN5-201ENST00000243040 KRTAP9-7A8MTY7 169 aa4.64□□□□□ -1.67
PFDN5-201ENST00000243040 P0C880 135 aa4.64□□□□□ -1.67
PFDN5-201ENST00000243040 SPTSSBQ8NFR3 76 aa4.64□□□□□ -1.67
PFDN5-201ENST00000243040 KRTAP3-2Q9BYR7 98 aa4.64□□□□□ -1.67
PFDN5-201ENST00000243040 COX7CP15954 63 aa4.63□□□□□ -1.67
PFDN5-201ENST00000243040 A6NN06 94 aa4.61□□□□□ -1.67
PFDN5-201ENST00000243040 CHKB-CPT1BH3BT56 60 aa4.61□□□□□ -1.67
PFDN5-201ENST00000243040 KRTAP10-5P60370 271 aa4.61□□□□□ -1.67
PFDN5-201ENST00000243040 R4GN34 69 aa4.61□□□□□ -1.67
PFDN5-201ENST00000243040 SYNE2Q8WXH0 6885 aaKnown RBP4.58□□□□□ -1.68
PFDN5-201ENST00000243040 M0QZ58 72 aa4.56□□□□□ -1.68
PFDN5-201ENST00000243040 H7BZZ5 65 aa4.54□□□□□ -1.68
PFDN5-201ENST00000243040 CYSTM1Q9H1C7 97 aa4.53□□□□□ -1.68
PFDN5-201ENST00000243040 COA5Q86WW8 74 aa4.52□□□□□ -1.69
PFDN5-201ENST00000243040 ANAPC13Q9BS18 74 aa4.51□□□□□ -1.69
PFDN5-201ENST00000243040 PLAC4Q8WY50 150 aa4.5□□□□□ -1.69
PFDN5-201ENST00000243040 KRTAP6-3Q3LI67 103 aa4.48□□□□□ -1.69
PFDN5-201ENST00000243040 MT1XP80297 61 aa4.47□□□□□ -1.69
PFDN5-201ENST00000243040 PRO2289Q9P1D8 64 aa4.47□□□□□ -1.69
PFDN5-201ENST00000243040 LINC01554Q52M75 96 aa4.46□□□□□ -1.7
PFDN5-201ENST00000243040 CCDC179H3BU77 68 aa4.42□□□□□ -1.7
PFDN5-201ENST00000243040 KRTAP13-4Q3LI77 160 aa4.4□□□□□ -1.71
PFDN5-201ENST00000243040 SEC61GP60059 68 aa4.38□□□□□ -1.71
PFDN5-201ENST00000243040 ATP5EP56381 51 aaPredicted RBP4.37□□□□□ -1.71
PFDN5-201ENST00000243040 SERP1Q9Y6X1 66 aa4.37□□□□□ -1.71
PFDN5-201ENST00000243040 KRTAP5-9P26371 169 aa4.36□□□□□ -1.71
PFDN5-201ENST00000243040 KRTAP12-2P59991 146 aa4.36□□□□□ -1.71
PFDN5-201ENST00000243040 MUC12Q9UKN1 5478 aa4.35□□□□□ -1.71
PFDN5-201ENST00000243040 KMT2DO14686 5537 aa4.35□□□□□ -1.71
PFDN5-201ENST00000243040 NEBP20929 6669 aa4.31□□□□□ -1.72
PFDN5-201ENST00000243040 A0A1B0GU33 70 aa4.29□□□□□ -1.72
PFDN5-201ENST00000243040 TMEM258P61165 79 aa4.29□□□□□ -1.72
PFDN5-201ENST00000243040 A0A1B0GU69 56 aa4.28□□□□□ -1.72
PFDN5-201ENST00000243040 KRTAP10-7P60409 375 aaPredicted RBP4.26□□□□□ -1.73
PFDN5-201ENST00000243040 KRTAP10-12P60413 245 aa4.26□□□□□ -1.73
PFDN5-201ENST00000243040 SPATA8Q6RVD6 105 aa4.26□□□□□ -1.73
PFDN5-201ENST00000243040 KRTAP8-1Q8IUC2 63 aa4.24□□□□□ -1.73
PFDN5-201ENST00000243040 A0A0D9SG42 100 aa4.23□□□□□ -1.73
PFDN5-201ENST00000243040 CAMK2N1Q7Z7J9 78 aa4.23□□□□□ -1.73
PFDN5-201ENST00000243040 MDN1Q9NU22 5596 aa4.23□□□□□ -1.73
PFDN5-201ENST00000243040 KRTAP4-8A0A0G2JLE6 195 aa4.21□□□□□ -1.74
PFDN5-201ENST00000243040 SPRR2FQ96RM1 72 aa4.21□□□□□ -1.74
PFDN5-201ENST00000243040 KRTAP4-8Q9BYQ9 185 aa4.21□□□□□ -1.74
PFDN5-201ENST00000243040 PRR15LQ9BU68 103 aa4.2□□□□□ -1.74
PFDN5-201ENST00000243040 LINC01558Q9Y6Z2 57 aa4.2□□□□□ -1.74
PFDN5-201ENST00000243040 SMIM26A0A096LP01 95 aa4.19□□□□□ -1.74
PFDN5-201ENST00000243040 KRTAP12-1P59990 96 aa4.19□□□□□ -1.74
PFDN5-201ENST00000243040 SPINT4Q6UDR6 99 aa4.17□□□□□ -1.74
PFDN5-201ENST00000243040 A8MU10 97 aa4.13□□□□□ -1.75
PFDN5-201ENST00000243040 SPRR2EP22531 72 aa4.12□□□□□ -1.75
PFDN5-201ENST00000243040 SPRR2BP35325 72 aa4.12□□□□□ -1.75
PFDN5-201ENST00000243040 SPRR2AP35326 72 aa4.12□□□□□ -1.75
PFDN5-201ENST00000243040 LCE1AQ5T7P2 110 aa4.1□□□□□ -1.75
PFDN5-201ENST00000243040 UQCR11O14957 56 aa4.07□□□□□ -1.76
PFDN5-201ENST00000243040 KRTAP20-1Q3LI63 56 aa4.07□□□□□ -1.76
PFDN5-201ENST00000243040 V9GYY9 64 aa4.03□□□□□ -1.76
PFDN5-201ENST00000243040 Q1T7F1 81 aa4.01□□□□□ -1.77
PFDN5-201ENST00000243040 KRTAP2-3P0C7H8 128 aa4□□□□□ -1.77
PFDN5-201ENST00000243040 KRTAP19-7Q3SYF9 63 aa4□□□□□ -1.77
PFDN5-201ENST00000243040 KRTAP2-4Q9BYR9 128 aa4□□□□□ -1.77
PFDN5-201ENST00000243040 C10orf95Q9H7T3 257 aa3.99□□□□□ -1.77
PFDN5-201ENST00000243040 SPRR2DP22532 72 aa3.98□□□□□ -1.77
PFDN5-201ENST00000243040 PCP4P48539 62 aa3.98□□□□□ -1.77
PFDN5-201ENST00000243040 MIR22HGQ0VDD5 57 aa3.98□□□□□ -1.77
PFDN5-201ENST00000243040 MT1EP04732 61 aa3.96□□□□□ -1.78
PFDN5-201ENST00000243040 TNP1P09430 55 aa3.96□□□□□ -1.78
PFDN5-201ENST00000243040 PSPHP1O15172 72 aa3.95□□□□□ -1.78
PFDN5-201ENST00000243040 RPS28P62857 69 aaKnown RBP3.91□□□□□ -1.78
PFDN5-201ENST00000243040 KRTAP19-5Q3LI72 72 aa3.91□□□□□ -1.78
PFDN5-201ENST00000243040 LCE5AQ5TCM9 118 aa3.9□□□□□ -1.79
PFDN5-201ENST00000243040 KRTAP19-3Q7Z4W3 81 aa3.9□□□□□ -1.79
PFDN5-201ENST00000243040 LCE3AQ5TA76 89 aa3.89□□□□□ -1.79
PFDN5-201ENST00000243040 KRTAP2-2Q9BYT5 123 aa3.89□□□□□ -1.79
PFDN5-201ENST00000243040 KRTAP2-1Q9BYU5 128 aa3.89□□□□□ -1.79
PFDN5-201ENST00000243040 K7ERS5 55 aa3.87□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms