RNA–Protein interactions for RNA: ENST00000239243.6

MSX2-201, Transcript of msh homeobox 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSX2, Length 2,241 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSX2-201ENST00000239243 HERC2O95714 4834 aa11.9□□□□□ -0.51
MSX2-201ENST00000239243 A8MU10 97 aa11.84□□□□□ -0.51
MSX2-201ENST00000239243 UQCR11O14957 56 aa11.82□□□□□ -0.52
MSX2-201ENST00000239243 LRP2P98164 4655 aa11.81□□□□□ -0.52
MSX2-201ENST00000239243 SEC61BP60468 96 aaKnown RBP11.81□□□□□ -0.52
MSX2-201ENST00000239243 RBM12B-AS1Q9P1G2 102 aa11.78□□□□□ -0.52
MSX2-201ENST00000239243 S4R3F8 94 aa11.77□□□□□ -0.53
MSX2-201ENST00000239243 LPAP08519 4548 aa11.77□□□□□ -0.53
MSX2-201ENST00000239243 H1FX-AS1Q4G0G2 97 aa11.76□□□□□ -0.53
MSX2-201ENST00000239243 SPATA8Q6RVD6 105 aa11.72□□□□□ -0.53
MSX2-201ENST00000239243 MIR22HGQ0VDD5 57 aa11.71□□□□□ -0.54
MSX2-201ENST00000239243 KRTAP3-3Q9BYR6 98 aa11.71□□□□□ -0.54
MSX2-201ENST00000239243 PMAIP1Q13794 54 aa11.62□□□□□ -0.55
MSX2-201ENST00000239243 A0A1B0GU33 70 aa11.6□□□□□ -0.55
MSX2-201ENST00000239243 CSAG1Q6PB30 78 aa11.47□□□□□ -0.57
MSX2-201ENST00000239243 A6NN06 94 aa11.46□□□□□ -0.57
MSX2-201ENST00000239243 H0YAA0 97 aa11.45□□□□□ -0.58
MSX2-201ENST00000239243 KRTAP10-6P60371 365 aaPredicted RBP11.43□□□□□ -0.58
MSX2-201ENST00000239243 KRTAP4-1Q9BYQ7 146 aa11.43□□□□□ -0.58
MSX2-201ENST00000239243 MUC17Q685J3 4493 aa11.41□□□□□ -0.58
MSX2-201ENST00000239243 KRTAP3-2Q9BYR7 98 aa11.39□□□□□ -0.59
MSX2-201ENST00000239243 PCLOQ9Y6V0 5065 aa11.32□□□□□ -0.6
MSX2-201ENST00000239243 ADM2Q7Z4H4 148 aa11.29□□□□□ -0.6
MSX2-201ENST00000239243 P0C880 135 aa11.27□□□□□ -0.61
MSX2-201ENST00000239243 KTN1-AS1Q86SY8 53 aa11.27□□□□□ -0.61
MSX2-201ENST00000239243 KRTAP19-2Q3LHN2 52 aa11.2□□□□□ -0.62
MSX2-201ENST00000239243 HERC1Q15751 4861 aa11.19□□□□□ -0.62
MSX2-201ENST00000239243 HMCN2Q8NDA2 5059 aa11.18□□□□□ -0.62
MSX2-201ENST00000239243 KRTAP13-4Q3LI77 160 aa11.16□□□□□ -0.62
MSX2-201ENST00000239243 K7ERS5 55 aa11.15□□□□□ -0.62
MSX2-201ENST00000239243 M0QZ58 72 aa11.08□□□□□ -0.64
MSX2-201ENST00000239243 A0A0D9SG42 100 aa11.03□□□□□ -0.64
MSX2-201ENST00000239243 MUC2Q02817 5179 aa10.92□□□□□ -0.66
MSX2-201ENST00000239243 R4GN34 69 aa10.89□□□□□ -0.67
MSX2-201ENST00000239243 FLGP20930 4061 aaPredicted RBP10.88□□□□□ -0.67
MSX2-201ENST00000239243 PRAC1Q96KF2 57 aa10.79□□□□□ -0.68
MSX2-201ENST00000239243 KRTAP12-1P59990 96 aa10.78□□□□□ -0.68
MSX2-201ENST00000239243 KRTAP12-2P59991 146 aa10.77□□□□□ -0.68
MSX2-201ENST00000239243 LCE2CQ5TA81 110 aa10.77□□□□□ -0.68
MSX2-201ENST00000239243 SPINT4Q6UDR6 99 aa10.76□□□□□ -0.69
MSX2-201ENST00000239243 LORP23490 312 aaPredicted RBP10.72□□□□□ -0.69
MSX2-201ENST00000239243 ROMO1P60602 79 aa10.72□□□□□ -0.69
MSX2-201ENST00000239243 LINC01554Q52M75 96 aa10.69□□□□□ -0.7
MSX2-201ENST00000239243 CRIPTQ9P021 101 aa10.64□□□□□ -0.71
MSX2-201ENST00000239243 RNF213Q63HN8 5207 aa10.6□□□□□ -0.71
MSX2-201ENST00000239243 UBR4Q5T4S7 5183 aa10.59□□□□□ -0.71
MSX2-201ENST00000239243 M0R2T5 61 aa10.56□□□□□ -0.72
MSX2-201ENST00000239243 MT1HP80294 61 aa10.56□□□□□ -0.72
MSX2-201ENST00000239243 KRTAP25-1Q3LHN0 102 aa10.48□□□□□ -0.73
MSX2-201ENST00000239243 FAT4Q6V0I7 4981 aa10.46□□□□□ -0.73
MSX2-201ENST00000239243 H3BS24 57 aa10.33□□□□□ -0.76
MSX2-201ENST00000239243 SPRR2GQ9BYE4 73 aa10.27□□□□□ -0.76
MSX2-201ENST00000239243 CAMK2N1Q7Z7J9 78 aa10.26□□□□□ -0.77
MSX2-201ENST00000239243 MT2AP02795 61 aa10.23□□□□□ -0.77
MSX2-201ENST00000239243 KRTAP9-8Q9BYQ0 159 aa10.22□□□□□ -0.77
MSX2-201ENST00000239243 KRTAP10-10P60014 251 aa10.2□□□□□ -0.78
MSX2-201ENST00000239243 MT1FP04733 61 aa10.18□□□□□ -0.78
MSX2-201ENST00000239243 KRTAP19-1Q8IUB9 90 aa10.17□□□□□ -0.78
MSX2-201ENST00000239243 C10orf95Q9H7T3 257 aa10.17□□□□□ -0.78
MSX2-201ENST00000239243 PLAC4Q8WY50 150 aa10.07□□□□□ -0.8
MSX2-201ENST00000239243 KRTAP19-8Q3LI54 63 aa9.92□□□□□ -0.82
MSX2-201ENST00000239243 TNP1P09430 55 aa9.84□□□□□ -0.83
MSX2-201ENST00000239243 KRTAP9-3Q9BYQ3 159 aa9.83□□□□□ -0.84
MSX2-201ENST00000239243 LCE2AQ5TA79 106 aaPredicted RBP9.82□□□□□ -0.84
MSX2-201ENST00000239243 PP632Q6XCG6 107 aa9.8□□□□□ -0.84
MSX2-201ENST00000239243 MT1BP07438 61 aa9.74□□□□□ -0.85
MSX2-201ENST00000239243 KRTAP23-1A1A580 65 aa9.67□□□□□ -0.86
MSX2-201ENST00000239243 KRTAP10-5P60370 271 aa9.52□□□□□ -0.89
MSX2-201ENST00000239243 MT1XP80297 61 aa9.52□□□□□ -0.89
MSX2-201ENST00000239243 LCE2BO14633 110 aa9.47□□□□□ -0.89
MSX2-201ENST00000239243 PRO2289Q9P1D8 64 aa9.45□□□□□ -0.9
MSX2-201ENST00000239243 KRTAP15-1Q3LI76 137 aa9.36□□□□□ -0.91
MSX2-201ENST00000239243 LCE3AQ5TA76 89 aa9.29□□□□□ -0.92
MSX2-201ENST00000239243 KRTAP10-12P60413 245 aa9.21□□□□□ -0.93
MSX2-201ENST00000239243 KRTAP10-7P60409 375 aaPredicted RBP9.16□□□□□ -0.94
MSX2-201ENST00000239243 KRTAP8-1Q8IUC2 63 aa9.14□□□□□ -0.95
MSX2-201ENST00000239243 A0A0A0MQY5 61 aa9.13□□□□□ -0.95
MSX2-201ENST00000239243 USH2AO75445 5202 aa9.06□□□□□ -0.96
MSX2-201ENST00000239243 KRTAP12-3P60328 96 aa8.93□□□□□ -0.98
MSX2-201ENST00000239243 NDUFAF8A1L188 74 aa8.84□□□□□ -0.99
MSX2-201ENST00000239243 KRTAP19-6Q3LI70 58 aa8.82□□□□□ -1
MSX2-201ENST00000239243 SPRR5A0A1B0GTR4 108 aa8.81□□□□□ -1
MSX2-201ENST00000239243 LUZP6Q538Z0 58 aa8.79□□□□□ -1
MSX2-201ENST00000239243 LCE2DQ5TA82 110 aaPredicted RBP8.77□□□□□ -1.01
MSX2-201ENST00000239243 SSPOA2VEC9 5147 aa8.76□□□□□ -1.01
MSX2-201ENST00000239243 KRTAP19-5Q3LI72 72 aa8.7□□□□□ -1.02
MSX2-201ENST00000239243 KRTAP4-8A0A0G2JLE6 195 aa8.68□□□□□ -1.02
MSX2-201ENST00000239243 KRTAP4-8Q9BYQ9 185 aa8.68□□□□□ -1.02
MSX2-201ENST00000239243 KMT2DO14686 5537 aa8.53□□□□□ -1.04
MSX2-201ENST00000239243 KRTAP19-7Q3SYF9 63 aa8.49□□□□□ -1.05
MSX2-201ENST00000239243 FSIP2Q5CZC0 6907 aa8.43□□□□□ -1.06
MSX2-201ENST00000239243 LCE3CQ5T5A8 94 aa8.37□□□□□ -1.07
MSX2-201ENST00000239243 KRTAP19-4Q3LI73 84 aa8.35□□□□□ -1.07
MSX2-201ENST00000239243 MT1EP04732 61 aa8.32□□□□□ -1.08
MSX2-201ENST00000239243 FCGBPQ9Y6R7 5405 aaPredicted RBP8.25□□□□□ -1.09
MSX2-201ENST00000239243 MT1LQ93083 61 aa8.22□□□□□ -1.09
MSX2-201ENST00000239243 KRTAP9-2Q9BYQ4 174 aa8.18□□□□□ -1.1
MSX2-201ENST00000239243 KRTAP4-7Q9BYR0 210 aa7.99□□□□□ -1.13
MSX2-201ENST00000239243 CRCT1Q9UGL9 99 aa7.98□□□□□ -1.13
MSX2-201ENST00000239243 KRTAP19-3Q7Z4W3 81 aa7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms