RNA–Protein interactions for RNA: ENST00000237247.10

SGIP1-201, Transcript of SH3 domain GRB2 like endophilin interacting protein 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SGIP1, Length 3,997 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGIP1-201ENST00000237247 SPINT4Q6UDR6 99 aa3.49□□□□□ -1.85
SGIP1-201ENST00000237247 KRTAP1-4P0C5Y4 121 aa3.48□□□□□ -1.85
SGIP1-201ENST00000237247 HERC2O95714 4834 aa3.47□□□□□ -1.85
SGIP1-201ENST00000237247 BIRC6Q9NR09 4857 aa3.47□□□□□ -1.85
SGIP1-201ENST00000237247 SPINK1P00995 79 aa3.46□□□□□ -1.86
SGIP1-201ENST00000237247 STAB2Q8WWQ8 2551 aa3.46□□□□□ -1.86
SGIP1-201ENST00000237247 SRRM2Q9UQ35 2752 aaKnown RBP3.46□□□□□ -1.86
SGIP1-201ENST00000237247 TPRXLQ17RH7 258 aa3.44□□□□□ -1.86
SGIP1-201ENST00000237247 KRTAP3-3Q9BYR6 98 aa3.42□□□□□ -1.86
SGIP1-201ENST00000237247 KRTAP3-2Q9BYR7 98 aa3.42□□□□□ -1.86
SGIP1-201ENST00000237247 A0A1B0GU33 70 aa3.42□□□□□ -1.86
SGIP1-201ENST00000237247 H1FX-AS1Q4G0G2 97 aa3.42□□□□□ -1.86
SGIP1-201ENST00000237247 KRTAP10-2P60368 255 aa3.41□□□□□ -1.86
SGIP1-201ENST00000237247 LPAP08519 4548 aa3.41□□□□□ -1.86
SGIP1-201ENST00000237247 CRIPTQ9P021 101 aa3.4□□□□□ -1.87
SGIP1-201ENST00000237247 KRTAP10-1P60331 282 aa3.4□□□□□ -1.87
SGIP1-201ENST00000237247 TYMSOSQ8TAI1 123 aa3.39□□□□□ -1.87
SGIP1-201ENST00000237247 FLGP20930 4061 aaPredicted RBP3.38□□□□□ -1.87
SGIP1-201ENST00000237247 COX6B2Q6YFQ2 88 aa3.36□□□□□ -1.87
SGIP1-201ENST00000237247 Q8N1X5 172 aa3.34□□□□□ -1.87
SGIP1-201ENST00000237247 KRTAP3-1Q9BYR8 98 aa3.34□□□□□ -1.88
SGIP1-201ENST00000237247 LCE2DQ5TA82 110 aaPredicted RBP3.31□□□□□ -1.88
SGIP1-201ENST00000237247 KIAA1109Q2LD37 5005 aa3.31□□□□□ -1.88
SGIP1-201ENST00000237247 PCLOQ9Y6V0 5065 aa3.3□□□□□ -1.88
SGIP1-201ENST00000237247 RPL37P61927 97 aaKnown RBP3.3□□□□□ -1.88
SGIP1-201ENST00000237247 FLG2Q5D862 2391 aaPredicted RBP3.3□□□□□ -1.88
SGIP1-201ENST00000237247 CAMK2N1Q7Z7J9 78 aa3.28□□□□□ -1.88
SGIP1-201ENST00000237247 J3QL48 77 aa3.27□□□□□ -1.89
SGIP1-201ENST00000237247 C10orf95Q9H7T3 257 aa3.27□□□□□ -1.89
SGIP1-201ENST00000237247 HMCN2Q8NDA2 5059 aa3.25□□□□□ -1.89
SGIP1-201ENST00000237247 XP32Q5T750 250 aa3.23□□□□□ -1.89
SGIP1-201ENST00000237247 KRTAP10-6P60371 365 aaPredicted RBP3.22□□□□□ -1.89
SGIP1-201ENST00000237247 C9orf92A6NGG3 77 aa3.22□□□□□ -1.89
SGIP1-201ENST00000237247 MT1HL1P0DM35 61 aa3.16□□□□□ -1.9
SGIP1-201ENST00000237247 PLAC4Q8WY50 150 aa3.16□□□□□ -1.9
SGIP1-201ENST00000237247 KRTAP13-4Q3LI77 160 aa3.16□□□□□ -1.9
SGIP1-201ENST00000237247 S4R3F8 94 aa3.16□□□□□ -1.9
SGIP1-201ENST00000237247 KRTAP10-8P60410 259 aa3.15□□□□□ -1.9
SGIP1-201ENST00000237247 KRTAP19-2Q3LHN2 52 aa3.15□□□□□ -1.9
SGIP1-201ENST00000237247 LRP2P98164 4655 aa3.15□□□□□ -1.91
SGIP1-201ENST00000237247 PRO2289Q9P1D8 64 aa3.14□□□□□ -1.91
SGIP1-201ENST00000237247 SMR3BP02814 79 aaPredicted RBP3.11□□□□□ -1.91
SGIP1-201ENST00000237247 KRTAP12-2P59991 146 aa3.1□□□□□ -1.91
SGIP1-201ENST00000237247 HERC1Q15751 4861 aa3.1□□□□□ -1.91
SGIP1-201ENST00000237247 M0QZ58 72 aa3.09□□□□□ -1.91
SGIP1-201ENST00000237247 KRTAP12-1P59990 96 aa3.08□□□□□ -1.92
SGIP1-201ENST00000237247 A0A0D9SG42 100 aa3.07□□□□□ -1.92
SGIP1-201ENST00000237247 KRTAP4-5Q9BYR2 181 aa3.05□□□□□ -1.92
SGIP1-201ENST00000237247 Q5VSD8 79 aa3.03□□□□□ -1.92
SGIP1-201ENST00000237247 SPRR5A0A1B0GTR4 108 aa3□□□□□ -1.93
SGIP1-201ENST00000237247 INE1O15225 51 aa3□□□□□ -1.93
SGIP1-201ENST00000237247 MUC2Q02817 5179 aa2.99□□□□□ -1.93
SGIP1-201ENST00000237247 PP632Q6XCG6 107 aa2.97□□□□□ -1.93
SGIP1-201ENST00000237247 DMBT1Q9UGM3 2413 aaPredicted RBP2.95□□□□□ -1.94
SGIP1-201ENST00000237247 R4GN34 69 aa2.94□□□□□ -1.94
SGIP1-201ENST00000237247 RNF213Q63HN8 5207 aa2.92□□□□□ -1.94
SGIP1-201ENST00000237247 UBR4Q5T4S7 5183 aa2.9□□□□□ -1.94
SGIP1-201ENST00000237247 KRTAP4-1Q9BYQ7 146 aa2.9□□□□□ -1.94
SGIP1-201ENST00000237247 LCE2CQ5TA81 110 aa2.89□□□□□ -1.95
SGIP1-201ENST00000237247 KRTAP23-1A1A580 65 aa2.86□□□□□ -1.95
SGIP1-201ENST00000237247 LCE2BO14633 110 aa2.85□□□□□ -1.95
SGIP1-201ENST00000237247 FAT4Q6V0I7 4981 aa2.81□□□□□ -1.96
SGIP1-201ENST00000237247 LORP23490 312 aaPredicted RBP2.8□□□□□ -1.96
SGIP1-201ENST00000237247 LOC100996750A0A140TA64 210 aa2.79□□□□□ -1.96
SGIP1-201ENST00000237247 KRTAP4-6Q9BYQ5 205 aa2.79□□□□□ -1.96
SGIP1-201ENST00000237247 TNP1P09430 55 aa2.71□□□□□ -1.98
SGIP1-201ENST00000237247 LCE2AQ5TA79 106 aaPredicted RBP2.68□□□□□ -1.98
SGIP1-201ENST00000237247 SPRR2GQ9BYE4 73 aa2.65□□□□□ -1.98
SGIP1-201ENST00000237247 KRTAP9-8Q9BYQ0 159 aa2.65□□□□□ -1.98
SGIP1-201ENST00000237247 MT1HP80294 61 aa2.62□□□□□ -1.99
SGIP1-201ENST00000237247 LCE3BQ5TA77 95 aa2.6□□□□□ -1.99
SGIP1-201ENST00000237247 SSPOA2VEC9 5147 aa2.59□□□□□ -2
SGIP1-201ENST00000237247 KRTAP19-1Q8IUB9 90 aa2.58□□□□□ -2
SGIP1-201ENST00000237247 M0R2T5 61 aa2.57□□□□□ -2
SGIP1-201ENST00000237247 USH2AO75445 5202 aa2.57□□□□□ -2
SGIP1-201ENST00000237247 KRTAP8-1Q8IUC2 63 aa2.55□□□□□ -2
SGIP1-201ENST00000237247 KRTAP9-3Q9BYQ3 159 aa2.55□□□□□ -2
SGIP1-201ENST00000237247 KRTAP19-8Q3LI54 63 aa2.54□□□□□ -2
SGIP1-201ENST00000237247 KRTAP10-10P60014 251 aa2.52□□□□□ -2.01
SGIP1-201ENST00000237247 LCE3AQ5TA76 89 aa2.52□□□□□ -2.01
SGIP1-201ENST00000237247 MT2AP02795 61 aa2.51□□□□□ -2.01
SGIP1-201ENST00000237247 MT1FP04733 61 aa2.51□□□□□ -2.01
SGIP1-201ENST00000237247 KRTAP9-2Q9BYQ4 174 aa2.48□□□□□ -2.01
SGIP1-201ENST00000237247 KRTAP9-6A0A140TA67 174 aa2.47□□□□□ -2.01
SGIP1-201ENST00000237247 MT1BP07438 61 aa2.47□□□□□ -2.01
SGIP1-201ENST00000237247 KRTAP10-5P60370 271 aa2.45□□□□□ -2.02
SGIP1-201ENST00000237247 MT1XP80297 61 aa2.44□□□□□ -2.02
SGIP1-201ENST00000237247 KRTAP10-12P60413 245 aa2.42□□□□□ -2.02
SGIP1-201ENST00000237247 KRTAP12-3P60328 96 aa2.42□□□□□ -2.02
SGIP1-201ENST00000237247 KRTAP4-8Q9BYQ9 185 aa2.42□□□□□ -2.02
SGIP1-201ENST00000237247 OBSCNQ5VST9 7968 aa2.39□□□□□ -2.03
SGIP1-201ENST00000237247 FSIP2Q5CZC0 6907 aa2.35□□□□□ -2.03
SGIP1-201ENST00000237247 KRTAP19-4Q3LI73 84 aa2.35□□□□□ -2.03
SGIP1-201ENST00000237247 KRTAP10-7P60409 375 aaPredicted RBP2.33□□□□□ -2.04
SGIP1-201ENST00000237247 CRCT1Q9UGL9 99 aa2.32□□□□□ -2.04
SGIP1-201ENST00000237247 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.32□□□□□ -2.04
SGIP1-201ENST00000237247 KRTAP2-3P0C7H8 128 aa2.32□□□□□ -2.04
SGIP1-201ENST00000237247 KRTAP2-4Q9BYR9 128 aa2.32□□□□□ -2.04
SGIP1-201ENST00000237247 KRTAP2-1Q9BYU5 128 aa2.32□□□□□ -2.04
SGIP1-201ENST00000237247 LCE3CQ5T5A8 94 aa2.3□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 135.1 ms