RNA–Protein interactions for RNA: ENST00000231238.9

TTC1-201, Transcript of tetratricopeptide repeat domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TTC1, Length 1,467 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC1-201ENST00000231238 FAM236DA0A1B0GTK5 79 aa5.28□□□□□ -1.56
TTC1-201ENST00000231238 FAM236CP0DP71 79 aa5.28□□□□□ -1.56
TTC1-201ENST00000231238 KRTAP13-3Q3SY46 172 aa5.28□□□□□ -1.56
TTC1-201ENST00000231238 ATP11AUNQ6ZP68 121 aa5.28□□□□□ -1.56
TTC1-201ENST00000231238 ABCA13Q86UQ4 5058 aa5.27□□□□□ -1.56
TTC1-201ENST00000231238 Q75L30 129 aa5.27□□□□□ -1.57
TTC1-201ENST00000231238 ATP5EP56381 51 aaPredicted RBP5.26□□□□□ -1.57
TTC1-201ENST00000231238 TPRXLQ17RH7 258 aa5.25□□□□□ -1.57
TTC1-201ENST00000231238 C7orf65Q6ZTY9 151 aa5.25□□□□□ -1.57
TTC1-201ENST00000231238 CYP4F30PQ9H0H9 118 aa5.24□□□□□ -1.57
TTC1-201ENST00000231238 KRTAP10-6P60371 365 aaPredicted RBP5.23□□□□□ -1.57
TTC1-201ENST00000231238 RPL37P61927 97 aaKnown RBP5.23□□□□□ -1.57
TTC1-201ENST00000231238 SPANXA2-OT1Q8N9U9 137 aa5.2□□□□□ -1.58
TTC1-201ENST00000231238 HRES1P13985 223 aa5.18□□□□□ -1.58
TTC1-201ENST00000231238 SPINK7P58062 85 aa5.17□□□□□ -1.58
TTC1-201ENST00000231238 KRTAP10-7P60409 375 aaPredicted RBP5.16□□□□□ -1.58
TTC1-201ENST00000231238 SERP1Q9Y6X1 66 aa5.15□□□□□ -1.58
TTC1-201ENST00000231238 MT3P25713 68 aa5.14□□□□□ -1.59
TTC1-201ENST00000231238 SEC61BP60468 96 aaKnown RBP5.13□□□□□ -1.59
TTC1-201ENST00000231238 ACYP2P14621 99 aa5.11□□□□□ -1.59
TTC1-201ENST00000231238 C4orf26Q17RF5 130 aa5.11□□□□□ -1.59
TTC1-201ENST00000231238 CHKB-CPT1BH3BT56 60 aa5.1□□□□□ -1.59
TTC1-201ENST00000231238 RPS28P62857 69 aaKnown RBP5.1□□□□□ -1.59
TTC1-201ENST00000231238 PCLOQ9Y6V0 5065 aa5.08□□□□□ -1.6
TTC1-201ENST00000231238 COA5Q86WW8 74 aa5.07□□□□□ -1.6
TTC1-201ENST00000231238 DMAC1Q96GE9 116 aa5.07□□□□□ -1.6
TTC1-201ENST00000231238 A8MUN3 132 aa5.07□□□□□ -1.6
TTC1-201ENST00000231238 KRTAP5-11Q6L8G4 156 aa5.04□□□□□ -1.6
TTC1-201ENST00000231238 SMIM26A0A096LP01 95 aa5.03□□□□□ -1.6
TTC1-201ENST00000231238 COX6B2Q6YFQ2 88 aa5.03□□□□□ -1.6
TTC1-201ENST00000231238 RBM12B-AS1Q9P1G2 102 aa5.03□□□□□ -1.6
TTC1-201ENST00000231238 LPAP08519 4548 aa5.01□□□□□ -1.61
TTC1-201ENST00000231238 SEC61GP60059 68 aa5□□□□□ -1.61
TTC1-201ENST00000231238 SPTSSBQ8NFR3 76 aa4.98□□□□□ -1.61
TTC1-201ENST00000231238 LRP2P98164 4655 aa4.97□□□□□ -1.61
TTC1-201ENST00000231238 LCE1EQ5T753 118 aa4.96□□□□□ -1.62
TTC1-201ENST00000231238 HERC1Q15751 4861 aa4.95□□□□□ -1.62
TTC1-201ENST00000231238 V9GYY9 64 aa4.94□□□□□ -1.62
TTC1-201ENST00000231238 H1FX-AS1Q4G0G2 97 aa4.93□□□□□ -1.62
TTC1-201ENST00000231238 S4R3F8 94 aa4.92□□□□□ -1.62
TTC1-201ENST00000231238 HMCN2Q8NDA2 5059 aa4.91□□□□□ -1.62
TTC1-201ENST00000231238 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.9□□□□□ -1.62
TTC1-201ENST00000231238 Q1T7F1 81 aa4.88□□□□□ -1.63
TTC1-201ENST00000231238 PRR15LQ9BU68 103 aa4.88□□□□□ -1.63
TTC1-201ENST00000231238 KRTAP4-1Q9BYQ7 146 aa4.88□□□□□ -1.63
TTC1-201ENST00000231238 MUC17Q685J3 4493 aa4.86□□□□□ -1.63
TTC1-201ENST00000231238 PSPHP1O15172 72 aa4.86□□□□□ -1.63
TTC1-201ENST00000231238 A0A1B0GU69 56 aa4.85□□□□□ -1.63
TTC1-201ENST00000231238 LCA10Q71F78 164 aa4.85□□□□□ -1.63
TTC1-201ENST00000231238 LINC01558Q9Y6Z2 57 aa4.85□□□□□ -1.63
TTC1-201ENST00000231238 CSAG1Q6PB30 78 aa4.81□□□□□ -1.64
TTC1-201ENST00000231238 LCE1FQ5T754 118 aa4.79□□□□□ -1.64
TTC1-201ENST00000231238 Q5VV11 94 aa4.75□□□□□ -1.65
TTC1-201ENST00000231238 A6NED7 52 aa4.75□□□□□ -1.65
TTC1-201ENST00000231238 UBR4Q5T4S7 5183 aa4.73□□□□□ -1.65
TTC1-201ENST00000231238 KRTAP10-5P60370 271 aa4.72□□□□□ -1.65
TTC1-201ENST00000231238 RNF213Q63HN8 5207 aa4.72□□□□□ -1.65
TTC1-201ENST00000231238 M0R2T5 61 aa4.7□□□□□ -1.66
TTC1-201ENST00000231238 MUC2Q02817 5179 aa4.7□□□□□ -1.66
TTC1-201ENST00000231238 KRTAP10-12P60413 245 aa4.69□□□□□ -1.66
TTC1-201ENST00000231238 ADM2Q7Z4H4 148 aa4.69□□□□□ -1.66
TTC1-201ENST00000231238 BRK1Q8WUW1 75 aa4.69□□□□□ -1.66
TTC1-201ENST00000231238 UQCR11O14957 56 aa4.69□□□□□ -1.66
TTC1-201ENST00000231238 KRTAP19-2Q3LHN2 52 aa4.69□□□□□ -1.66
TTC1-201ENST00000231238 A0A1B0GU33 70 aa4.68□□□□□ -1.66
TTC1-201ENST00000231238 PRO0628Q9UI54 55 aa4.66□□□□□ -1.66
TTC1-201ENST00000231238 MIR22HGQ0VDD5 57 aa4.63□□□□□ -1.67
TTC1-201ENST00000231238 H0YAA0 97 aa4.62□□□□□ -1.67
TTC1-201ENST00000231238 FLGP20930 4061 aaPredicted RBP4.62□□□□□ -1.67
TTC1-201ENST00000231238 P0C880 135 aa4.61□□□□□ -1.67
TTC1-201ENST00000231238 CDC42SE1Q9NRR8 79 aa4.6□□□□□ -1.67
TTC1-201ENST00000231238 MT1HP80294 61 aa4.57□□□□□ -1.68
TTC1-201ENST00000231238 SPATA8Q6RVD6 105 aa4.57□□□□□ -1.68
TTC1-201ENST00000231238 R4GN34 69 aa4.56□□□□□ -1.68
TTC1-201ENST00000231238 M0QZ58 72 aa4.54□□□□□ -1.68
TTC1-201ENST00000231238 A0A0D9SG42 100 aa4.53□□□□□ -1.68
TTC1-201ENST00000231238 A8MU10 97 aa4.51□□□□□ -1.69
TTC1-201ENST00000231238 K7ERS5 55 aa4.51□□□□□ -1.69
TTC1-201ENST00000231238 LINC01554Q52M75 96 aa4.5□□□□□ -1.69
TTC1-201ENST00000231238 FAT4Q6V0I7 4981 aa4.5□□□□□ -1.69
TTC1-201ENST00000231238 LCE3CQ5T5A8 94 aa4.49□□□□□ -1.69
TTC1-201ENST00000231238 KRTAP9-6A8MVA2 160 aa4.48□□□□□ -1.69
TTC1-201ENST00000231238 KRTAP13-4Q3LI77 160 aa4.48□□□□□ -1.69
TTC1-201ENST00000231238 PRAC1Q96KF2 57 aa4.48□□□□□ -1.69
TTC1-201ENST00000231238 CRIPTQ9P021 101 aa4.47□□□□□ -1.69
TTC1-201ENST00000231238 KRTAP10-10P60014 251 aa4.45□□□□□ -1.7
TTC1-201ENST00000231238 PMAIP1Q13794 54 aa4.43□□□□□ -1.7
TTC1-201ENST00000231238 SPINT4Q6UDR6 99 aa4.43□□□□□ -1.7
TTC1-201ENST00000231238 NDUFAF8A1L188 74 aa4.4□□□□□ -1.71
TTC1-201ENST00000231238 MT2AP02795 61 aa4.4□□□□□ -1.71
TTC1-201ENST00000231238 MT1FP04733 61 aa4.37□□□□□ -1.71
TTC1-201ENST00000231238 KRTAP12-1P59990 96 aa4.34□□□□□ -1.71
TTC1-201ENST00000231238 KRTAP12-2P59991 146 aa4.33□□□□□ -1.72
TTC1-201ENST00000231238 A6NN06 94 aa4.31□□□□□ -1.72
TTC1-201ENST00000231238 CAMK2N1Q7Z7J9 78 aa4.3□□□□□ -1.72
TTC1-201ENST00000231238 PLAC4Q8WY50 150 aa4.3□□□□□ -1.72
TTC1-201ENST00000231238 SPRR2GQ9BYE4 73 aa4.3□□□□□ -1.72
TTC1-201ENST00000231238 KRTAP5-1Q6L8H4 278 aa4.29□□□□□ -1.72
TTC1-201ENST00000231238 ROMO1P60602 79 aa4.24□□□□□ -1.73
TTC1-201ENST00000231238 KTN1-AS1Q86SY8 53 aa4.22□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 7 ms