RNA–Protein interactions for RNA: ENST00000231061.8

SPARC-201, Transcript of secreted protein acidic and cysteine rich, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPARC, Length 3,701 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-201ENST00000231061 H1FX-AS1Q4G0G2 97 aa4.38□□□□□ -1.71
SPARC-201ENST00000231061 HYDINQ4G0P3 5121 aa4.37□□□□□ -1.71
SPARC-201ENST00000231061 KMT2CQ8NEZ4 4911 aaKnown RBP4.36□□□□□ -1.71
SPARC-201ENST00000231061 VPS13BQ7Z7G8 4022 aa4.36□□□□□ -1.71
SPARC-201ENST00000231061 C9orf92A6NGG3 77 aa4.36□□□□□ -1.71
SPARC-201ENST00000231061 FAT2Q9NYQ8 4349 aa4.35□□□□□ -1.71
SPARC-201ENST00000231061 PKD1P98161 4303 aa4.35□□□□□ -1.71
SPARC-201ENST00000231061 A0A0D9SG42 100 aa4.33□□□□□ -1.72
SPARC-201ENST00000231061 RPL37P61927 97 aaKnown RBP4.32□□□□□ -1.72
SPARC-201ENST00000231061 RPS29P62273 56 aaKnown RBP4.27□□□□□ -1.73
SPARC-201ENST00000231061 PKHD1P08F94 4074 aa4.26□□□□□ -1.73
SPARC-201ENST00000231061 DYNC1H1Q14204 4646 aaKnown RBP4.25□□□□□ -1.73
SPARC-201ENST00000231061 FAT1Q14517 4588 aa4.24□□□□□ -1.73
SPARC-201ENST00000231061 SACSQ9NZJ4 4579 aa4.24□□□□□ -1.73
SPARC-201ENST00000231061 LCE2CQ5TA81 110 aa4.22□□□□□ -1.73
SPARC-201ENST00000231061 COX6B2Q6YFQ2 88 aa4.22□□□□□ -1.73
SPARC-201ENST00000231061 XP32Q5T750 250 aa4.22□□□□□ -1.73
SPARC-201ENST00000231061 RYR3Q15413 4870 aa4.21□□□□□ -1.74
SPARC-201ENST00000231061 KRTAP3-1Q9BYR8 98 aa4.19□□□□□ -1.74
SPARC-201ENST00000231061 LCE2AQ5TA79 106 aaPredicted RBP4.18□□□□□ -1.74
SPARC-201ENST00000231061 A0A1B0GVY2 172 aa4.17□□□□□ -1.74
SPARC-201ENST00000231061 APOBP04114 4563 aaKnown RBP4.16□□□□□ -1.74
SPARC-201ENST00000231061 KRTAP10-4P60372 401 aaPredicted RBP4.16□□□□□ -1.74
SPARC-201ENST00000231061 EPPK1P58107 5090 aaKnown RBP4.16□□□□□ -1.74
SPARC-201ENST00000231061 KIAA1109Q2LD37 5005 aa4.16□□□□□ -1.74
SPARC-201ENST00000231061 INE1O15225 51 aa4.15□□□□□ -1.75
SPARC-201ENST00000231061 PKHD1L1Q86WI1 4243 aa4.13□□□□□ -1.75
SPARC-201ENST00000231061 RYR1P21817 5038 aa4.13□□□□□ -1.75
SPARC-201ENST00000231061 S4R3F8 94 aa4.09□□□□□ -1.75
SPARC-201ENST00000231061 Q5VSD8 79 aa4.07□□□□□ -1.76
SPARC-201ENST00000231061 LRP1Q07954 4544 aaKnown RBP4.06□□□□□ -1.76
SPARC-201ENST00000231061 RYR2Q92736 4967 aa4.06□□□□□ -1.76
SPARC-201ENST00000231061 FAT3Q8TDW7 4589 aa4.06□□□□□ -1.76
SPARC-201ENST00000231061 KRTAP17-1Q9BYP8 105 aa4.05□□□□□ -1.76
SPARC-201ENST00000231061 LCE2BO14633 110 aa4.05□□□□□ -1.76
SPARC-201ENST00000231061 KRTAP4-5Q9BYR2 181 aa4.04□□□□□ -1.76
SPARC-201ENST00000231061 MYCBP2O75592 4640 aa4.02□□□□□ -1.77
SPARC-201ENST00000231061 KRTAP13-4Q3LI77 160 aa4.01□□□□□ -1.77
SPARC-201ENST00000231061 KRTAP12-2P59991 146 aa4□□□□□ -1.77
SPARC-201ENST00000231061 TNXBP22105 4242 aa4□□□□□ -1.77
SPARC-201ENST00000231061 HSPG2P98160 4391 aa3.99□□□□□ -1.77
SPARC-201ENST00000231061 KRTAP10-6P60371 365 aaPredicted RBP3.98□□□□□ -1.77
SPARC-201ENST00000231061 PP632Q6XCG6 107 aa3.97□□□□□ -1.77
SPARC-201ENST00000231061 BIRC6Q9NR09 4857 aa3.97□□□□□ -1.77
SPARC-201ENST00000231061 PCLOQ9Y6V0 5065 aa3.95□□□□□ -1.78
SPARC-201ENST00000231061 HERC2O95714 4834 aa3.95□□□□□ -1.78
SPARC-201ENST00000231061 HERC1Q15751 4861 aa3.9□□□□□ -1.78
SPARC-201ENST00000231061 MT1HL1P0DM35 61 aa3.9□□□□□ -1.79
SPARC-201ENST00000231061 ABCA13Q86UQ4 5058 aa3.85□□□□□ -1.79
SPARC-201ENST00000231061 KRTAP12-1P59990 96 aa3.84□□□□□ -1.79
SPARC-201ENST00000231061 LPAP08519 4548 aa3.84□□□□□ -1.79
SPARC-201ENST00000231061 LRP2P98164 4655 aa3.84□□□□□ -1.8
SPARC-201ENST00000231061 RNF213Q63HN8 5207 aa3.8□□□□□ -1.8
SPARC-201ENST00000231061 LORP23490 312 aaPredicted RBP3.8□□□□□ -1.8
SPARC-201ENST00000231061 M0QZ58 72 aa3.8□□□□□ -1.8
SPARC-201ENST00000231061 UBR4Q5T4S7 5183 aa3.79□□□□□ -1.8
SPARC-201ENST00000231061 FSIP2Q5CZC0 6907 aa3.77□□□□□ -1.81
SPARC-201ENST00000231061 SPRR5A0A1B0GTR4 108 aa3.67□□□□□ -1.82
SPARC-201ENST00000231061 KRTAP4-1Q9BYQ7 146 aa3.66□□□□□ -1.82
SPARC-201ENST00000231061 M0R2T5 61 aa3.64□□□□□ -1.83
SPARC-201ENST00000231061 MUC17Q685J3 4493 aa3.62□□□□□ -1.83
SPARC-201ENST00000231061 MUC2Q02817 5179 aa3.61□□□□□ -1.83
SPARC-201ENST00000231061 KRTAP19-2Q3LHN2 52 aa3.52□□□□□ -1.85
SPARC-201ENST00000231061 FLGP20930 4061 aaPredicted RBP3.45□□□□□ -1.86
SPARC-201ENST00000231061 FAT4Q6V0I7 4981 aa3.45□□□□□ -1.86
SPARC-201ENST00000231061 TNP1P09430 55 aa3.43□□□□□ -1.86
SPARC-201ENST00000231061 HMCN2Q8NDA2 5059 aa3.41□□□□□ -1.86
SPARC-201ENST00000231061 KRTAP2-2Q9BYT5 123 aa3.39□□□□□ -1.87
SPARC-201ENST00000231061 KRTAP10-10P60014 251 aa3.35□□□□□ -1.87
SPARC-201ENST00000231061 LCE1EQ5T753 118 aa3.32□□□□□ -1.88
SPARC-201ENST00000231061 LCE1AQ5T7P2 110 aa3.3□□□□□ -1.88
SPARC-201ENST00000231061 SPRR2GQ9BYE4 73 aa3.29□□□□□ -1.88
SPARC-201ENST00000231061 KRTAP19-1Q8IUB9 90 aa3.29□□□□□ -1.88
SPARC-201ENST00000231061 LCE5AQ5TCM9 118 aa3.28□□□□□ -1.88
SPARC-201ENST00000231061 LCE1FQ5T754 118 aa3.27□□□□□ -1.89
SPARC-201ENST00000231061 MT1HP80294 61 aa3.27□□□□□ -1.89
SPARC-201ENST00000231061 MT1FP04733 61 aa3.24□□□□□ -1.89
SPARC-201ENST00000231061 LCE3AQ5TA76 89 aa3.24□□□□□ -1.89
SPARC-201ENST00000231061 MT2AP02795 61 aa3.23□□□□□ -1.89
SPARC-201ENST00000231061 KRTAP9-2Q9BYQ4 174 aa3.22□□□□□ -1.89
SPARC-201ENST00000231061 USH2AO75445 5202 aa3.19□□□□□ -1.9
SPARC-201ENST00000231061 KRTAP9-8Q9BYQ0 159 aa3.17□□□□□ -1.9
SPARC-201ENST00000231061 LCE3CQ5T5A8 94 aa3.17□□□□□ -1.9
SPARC-201ENST00000231061 KRTAP6-3Q3LI67 103 aa3.14□□□□□ -1.91
SPARC-201ENST00000231061 KRTAP19-8Q3LI54 63 aa3.13□□□□□ -1.91
SPARC-201ENST00000231061 LCE1DQ5T752 114 aa3.13□□□□□ -1.91
SPARC-201ENST00000231061 MT1BP07438 61 aa3.12□□□□□ -1.91
SPARC-201ENST00000231061 KRTAP10-5P60370 271 aa3.11□□□□□ -1.91
SPARC-201ENST00000231061 KRTAP10-12P60413 245 aa3.1□□□□□ -1.91
SPARC-201ENST00000231061 MT1XP80297 61 aa3.1□□□□□ -1.91
SPARC-201ENST00000231061 KRTAP8-1Q8IUC2 63 aa3.09□□□□□ -1.91
SPARC-201ENST00000231061 KRTAP9-6A0A140TA67 174 aa3.09□□□□□ -1.91
SPARC-201ENST00000231061 KRTAP12-3P60328 96 aa3.07□□□□□ -1.92
SPARC-201ENST00000231061 KRTAP10-7P60409 375 aaPredicted RBP3.05□□□□□ -1.92
SPARC-201ENST00000231061 KRTAP9-4Q9BYQ2 154 aa3.05□□□□□ -1.92
SPARC-201ENST00000231061 KRTAP9-3Q9BYQ3 159 aa3.04□□□□□ -1.92
SPARC-201ENST00000231061 CRCT1Q9UGL9 99 aa3.04□□□□□ -1.92
SPARC-201ENST00000231061 SSPOA2VEC9 5147 aa3.01□□□□□ -1.93
SPARC-201ENST00000231061 SYNE2Q8WXH0 6885 aaKnown RBP3□□□□□ -1.93
SPARC-201ENST00000231061 LCE3EQ5T5B0 92 aa2.97□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms