RNA–Protein interactions for RNA: ENST00000225504.7

SUPT4H1-201, Transcript of SPT4 homolog, DSIF elongation factor subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SUPT4H1, Length 1,489 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT4H1-201ENST00000225504 OCR1Q9BZK8 76 aa6.97□□□□□ -1.29
SUPT4H1-201ENST00000225504 PMAIP1Q13794 54 aa6.96□□□□□ -1.3
SUPT4H1-201ENST00000225504 MT2AP02795 61 aa6.95□□□□□ -1.3
SUPT4H1-201ENST00000225504 LOC101927531A0A1B0GV80 90 aa6.94□□□□□ -1.3
SUPT4H1-201ENST00000225504 KRTAP19-1Q8IUB9 90 aa6.94□□□□□ -1.3
SUPT4H1-201ENST00000225504 C1orf64Q8NEQ6 169 aa6.94□□□□□ -1.3
SUPT4H1-201ENST00000225504 ATOX1O00244 68 aa6.9□□□□□ -1.31
SUPT4H1-201ENST00000225504 MT1FP04733 61 aa6.9□□□□□ -1.31
SUPT4H1-201ENST00000225504 LINC00208Q96KT6 92 aa6.9□□□□□ -1.31
SUPT4H1-201ENST00000225504 IMUPQ9GZP8 106 aa6.9□□□□□ -1.31
SUPT4H1-201ENST00000225504 TMEM258P61165 79 aa6.88□□□□□ -1.31
SUPT4H1-201ENST00000225504 KLKP1Q107X0 134 aa6.85□□□□□ -1.31
SUPT4H1-201ENST00000225504 FAM236AA0A1B0GUQ0 79 aa6.85□□□□□ -1.31
SUPT4H1-201ENST00000225504 FAM236BA0A1B0GV22 79 aa6.85□□□□□ -1.31
SUPT4H1-201ENST00000225504 KRTAP10-10P60014 251 aa6.85□□□□□ -1.31
SUPT4H1-201ENST00000225504 MP68P56378 58 aa6.84□□□□□ -1.31
SUPT4H1-201ENST00000225504 S4R3F8 94 aa6.82□□□□□ -1.32
SUPT4H1-201ENST00000225504 LCA10Q71F78 164 aa6.81□□□□□ -1.32
SUPT4H1-201ENST00000225504 KRTAP4-7Q9BYR0 210 aa6.8□□□□□ -1.32
SUPT4H1-201ENST00000225504 FSIP2Q5CZC0 6907 aa6.8□□□□□ -1.32
SUPT4H1-201ENST00000225504 KRTAP9-3Q9BYQ3 159 aa6.79□□□□□ -1.32
SUPT4H1-201ENST00000225504 H3BPC8 53 aa6.76□□□□□ -1.33
SUPT4H1-201ENST00000225504 A0A0A0MQY5 61 aa6.75□□□□□ -1.33
SUPT4H1-201ENST00000225504 TRAV7A0A075B6U4 112 aa6.74□□□□□ -1.33
SUPT4H1-201ENST00000225504 LCE1DQ5T752 114 aa6.73□□□□□ -1.33
SUPT4H1-201ENST00000225504 CSAG1Q6PB30 78 aa6.73□□□□□ -1.33
SUPT4H1-201ENST00000225504 CRCT1Q9UGL9 99 aa6.73□□□□□ -1.33
SUPT4H1-201ENST00000225504 COX7CP15954 63 aa6.71□□□□□ -1.34
SUPT4H1-201ENST00000225504 SMIM26A0A096LP01 95 aa6.7□□□□□ -1.34
SUPT4H1-201ENST00000225504 USH2AO75445 5202 aa6.69□□□□□ -1.34
SUPT4H1-201ENST00000225504 SERP1Q9Y6X1 66 aa6.68□□□□□ -1.34
SUPT4H1-201ENST00000225504 A8MUN3 132 aa6.66□□□□□ -1.34
SUPT4H1-201ENST00000225504 BRK1Q8WUW1 75 aa6.65□□□□□ -1.35
SUPT4H1-201ENST00000225504 NDUFC1O43677 76 aa6.62□□□□□ -1.35
SUPT4H1-201ENST00000225504 SNURFQ9Y675 71 aa6.62□□□□□ -1.35
SUPT4H1-201ENST00000225504 DMAC1Q96GE9 116 aa6.61□□□□□ -1.35
SUPT4H1-201ENST00000225504 SERP2Q8N6R1 65 aa6.6□□□□□ -1.35
SUPT4H1-201ENST00000225504 KTN1-AS1Q86SY8 53 aa6.6□□□□□ -1.35
SUPT4H1-201ENST00000225504 SSPOA2VEC9 5147 aa6.58□□□□□ -1.36
SUPT4H1-201ENST00000225504 KRTAP4-9Q9BYQ8 210 aa6.58□□□□□ -1.36
SUPT4H1-201ENST00000225504 C20orf197Q8N268 126 aa6.57□□□□□ -1.36
SUPT4H1-201ENST00000225504 KRTAP4-2Q9BYR5 136 aa6.52□□□□□ -1.37
SUPT4H1-201ENST00000225504 H0YAA0 97 aa6.48□□□□□ -1.37
SUPT4H1-201ENST00000225504 ACYP2P14621 99 aa6.48□□□□□ -1.37
SUPT4H1-201ENST00000225504 ATP5EP56381 51 aaPredicted RBP6.47□□□□□ -1.37
SUPT4H1-201ENST00000225504 ADM2Q7Z4H4 148 aa6.47□□□□□ -1.37
SUPT4H1-201ENST00000225504 SPRR2GQ9BYE4 73 aa6.47□□□□□ -1.37
SUPT4H1-201ENST00000225504 SPANXA2-OT1Q8N9U9 137 aa6.44□□□□□ -1.38
SUPT4H1-201ENST00000225504 CYSTM1Q9H1C7 97 aa6.41□□□□□ -1.38
SUPT4H1-201ENST00000225504 MT1BP07438 61 aa6.41□□□□□ -1.38
SUPT4H1-201ENST00000225504 KRTAP19-8Q3LI54 63 aa6.41□□□□□ -1.38
SUPT4H1-201ENST00000225504 KRTAP19-6Q3LI70 58 aa6.4□□□□□ -1.39
SUPT4H1-201ENST00000225504 CRIPTQ9P021 101 aa6.4□□□□□ -1.39
SUPT4H1-201ENST00000225504 FCGBPQ9Y6R7 5405 aaPredicted RBP6.39□□□□□ -1.39
SUPT4H1-201ENST00000225504 P0C880 135 aa6.39□□□□□ -1.39
SUPT4H1-201ENST00000225504 CHKB-CPT1BH3BT56 60 aa6.35□□□□□ -1.39
SUPT4H1-201ENST00000225504 Q5VV11 94 aa6.35□□□□□ -1.39
SUPT4H1-201ENST00000225504 H7BZZ5 65 aa6.34□□□□□ -1.4
SUPT4H1-201ENST00000225504 SPTSSBQ8NFR3 76 aa6.32□□□□□ -1.4
SUPT4H1-201ENST00000225504 PSPHP1O15172 72 aa6.3□□□□□ -1.4
SUPT4H1-201ENST00000225504 KRTAP4-11Q9BYQ6 195 aa6.3□□□□□ -1.4
SUPT4H1-201ENST00000225504 COA5Q86WW8 74 aa6.28□□□□□ -1.4
SUPT4H1-201ENST00000225504 Q1T7F1 81 aa6.26□□□□□ -1.41
SUPT4H1-201ENST00000225504 R4GN34 69 aa6.25□□□□□ -1.41
SUPT4H1-201ENST00000225504 A6NN06 94 aa6.24□□□□□ -1.41
SUPT4H1-201ENST00000225504 M0QZ58 72 aa6.23□□□□□ -1.41
SUPT4H1-201ENST00000225504 LINC01554Q52M75 96 aa6.23□□□□□ -1.41
SUPT4H1-201ENST00000225504 LCE4AQ5TA78 99 aa6.22□□□□□ -1.41
SUPT4H1-201ENST00000225504 KRTAP10-5P60370 271 aa6.17□□□□□ -1.42
SUPT4H1-201ENST00000225504 MACF1Q9UPN3 7388 aaKnown RBP6.15□□□□□ -1.43
SUPT4H1-201ENST00000225504 PLAC4Q8WY50 150 aa6.1□□□□□ -1.43
SUPT4H1-201ENST00000225504 KRTAP9-7A8MTY7 169 aa6.09□□□□□ -1.44
SUPT4H1-201ENST00000225504 KRTAP13-4Q3LI77 160 aa6.08□□□□□ -1.44
SUPT4H1-201ENST00000225504 MT1XP80297 61 aa6.05□□□□□ -1.44
SUPT4H1-201ENST00000225504 SYNE2Q8WXH0 6885 aaKnown RBP6.02□□□□□ -1.45
SUPT4H1-201ENST00000225504 LCE5AQ5TCM9 118 aa6.01□□□□□ -1.45
SUPT4H1-201ENST00000225504 KRTAP5-3Q6L8H2 238 aa6.01□□□□□ -1.45
SUPT4H1-201ENST00000225504 PRO2289Q9P1D8 64 aa5.96□□□□□ -1.45
SUPT4H1-201ENST00000225504 A0A1B0GU33 70 aa5.95□□□□□ -1.46
SUPT4H1-201ENST00000225504 SPATA8Q6RVD6 105 aa5.95□□□□□ -1.46
SUPT4H1-201ENST00000225504 CDC42SE1Q9NRR8 79 aa5.95□□□□□ -1.46
SUPT4H1-201ENST00000225504 A0A1B0GU69 56 aa5.93□□□□□ -1.46
SUPT4H1-201ENST00000225504 KRTAP6-3Q3LI67 103 aa5.91□□□□□ -1.46
SUPT4H1-201ENST00000225504 A0A0D9SG42 100 aa5.89□□□□□ -1.47
SUPT4H1-201ENST00000225504 LINC01558Q9Y6Z2 57 aa5.84□□□□□ -1.47
SUPT4H1-201ENST00000225504 A8MU10 97 aa5.83□□□□□ -1.48
SUPT4H1-201ENST00000225504 KRTAP12-2P59991 146 aa5.8□□□□□ -1.48
SUPT4H1-201ENST00000225504 KRTAP10-7P60409 375 aaPredicted RBP5.8□□□□□ -1.48
SUPT4H1-201ENST00000225504 KRTAP19-4Q3LI73 84 aa5.8□□□□□ -1.48
SUPT4H1-201ENST00000225504 KRTAP12-1P59990 96 aa5.78□□□□□ -1.48
SUPT4H1-201ENST00000225504 CAMK2N1Q7Z7J9 78 aa5.78□□□□□ -1.48
SUPT4H1-201ENST00000225504 KMT2DO14686 5537 aa5.78□□□□□ -1.48
SUPT4H1-201ENST00000225504 ROMO1P60602 79 aa5.77□□□□□ -1.49
SUPT4H1-201ENST00000225504 SPINT4Q6UDR6 99 aa5.77□□□□□ -1.49
SUPT4H1-201ENST00000225504 PRR15LQ9BU68 103 aa5.77□□□□□ -1.49
SUPT4H1-201ENST00000225504 KRTAP5-9P26371 169 aa5.74□□□□□ -1.49
SUPT4H1-201ENST00000225504 PRAC1Q96KF2 57 aa5.74□□□□□ -1.49
SUPT4H1-201ENST00000225504 KRTAP10-12P60413 245 aa5.73□□□□□ -1.49
SUPT4H1-201ENST00000225504 A6NED7 52 aa5.72□□□□□ -1.49
SUPT4H1-201ENST00000225504 KRTAP8-1Q8IUC2 63 aa5.69□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 100.3 ms