RNA–Protein interactions for RNA: ENST00000222214.9

GCDH-201, Transcript of glutaryl-CoA dehydrogenase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GCDH, Length 1,956 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCDH-201ENST00000222214 LCA10Q71F78 164 aa9.06□□□□□ -0.96
GCDH-201ENST00000222214 UQCR11O14957 56 aa9.01□□□□□ -0.97
GCDH-201ENST00000222214 A8MU10 97 aa8.99□□□□□ -0.97
GCDH-201ENST00000222214 SEC61BP60468 96 aaKnown RBP8.95□□□□□ -0.98
GCDH-201ENST00000222214 RBM12B-AS1Q9P1G2 102 aa8.94□□□□□ -0.98
GCDH-201ENST00000222214 SPATA8Q6RVD6 105 aa8.93□□□□□ -0.98
GCDH-201ENST00000222214 S4R3F8 94 aa8.93□□□□□ -0.98
GCDH-201ENST00000222214 H1FX-AS1Q4G0G2 97 aa8.93□□□□□ -0.98
GCDH-201ENST00000222214 MIR22HGQ0VDD5 57 aa8.92□□□□□ -0.98
GCDH-201ENST00000222214 KRTAP3-3Q9BYR6 98 aa8.88□□□□□ -0.99
GCDH-201ENST00000222214 LRP2P98164 4655 aa8.87□□□□□ -0.99
GCDH-201ENST00000222214 PMAIP1Q13794 54 aa8.86□□□□□ -0.99
GCDH-201ENST00000222214 PCLOQ9Y6V0 5065 aa8.83□□□□□ -1
GCDH-201ENST00000222214 A0A1B0GU33 70 aa8.82□□□□□ -1
GCDH-201ENST00000222214 LPAP08519 4548 aa8.82□□□□□ -1
GCDH-201ENST00000222214 A6NN06 94 aa8.75□□□□□ -1.01
GCDH-201ENST00000222214 H0YAA0 97 aa8.71□□□□□ -1.02
GCDH-201ENST00000222214 CSAG1Q6PB30 78 aa8.71□□□□□ -1.02
GCDH-201ENST00000222214 KRTAP10-6P60371 365 aaPredicted RBP8.68□□□□□ -1.02
GCDH-201ENST00000222214 KRTAP3-2Q9BYR7 98 aa8.65□□□□□ -1.02
GCDH-201ENST00000222214 KRTAP4-1Q9BYQ7 146 aa8.62□□□□□ -1.03
GCDH-201ENST00000222214 KTN1-AS1Q86SY8 53 aa8.61□□□□□ -1.03
GCDH-201ENST00000222214 HERC1Q15751 4861 aa8.61□□□□□ -1.03
GCDH-201ENST00000222214 MUC17Q685J3 4493 aa8.58□□□□□ -1.04
GCDH-201ENST00000222214 ADM2Q7Z4H4 148 aa8.57□□□□□ -1.04
GCDH-201ENST00000222214 P0C880 135 aa8.53□□□□□ -1.04
GCDH-201ENST00000222214 K7ERS5 55 aa8.5□□□□□ -1.05
GCDH-201ENST00000222214 KRTAP19-2Q3LHN2 52 aa8.48□□□□□ -1.05
GCDH-201ENST00000222214 KRTAP13-4Q3LI77 160 aa8.46□□□□□ -1.06
GCDH-201ENST00000222214 HMCN2Q8NDA2 5059 aa8.43□□□□□ -1.06
GCDH-201ENST00000222214 M0QZ58 72 aa8.43□□□□□ -1.06
GCDH-201ENST00000222214 A0A0D9SG42 100 aa8.35□□□□□ -1.07
GCDH-201ENST00000222214 R4GN34 69 aa8.27□□□□□ -1.09
GCDH-201ENST00000222214 PRAC1Q96KF2 57 aa8.22□□□□□ -1.09
GCDH-201ENST00000222214 FLGP20930 4061 aaPredicted RBP8.2□□□□□ -1.1
GCDH-201ENST00000222214 KRTAP12-1P59990 96 aa8.19□□□□□ -1.1
GCDH-201ENST00000222214 MUC2Q02817 5179 aa8.18□□□□□ -1.1
GCDH-201ENST00000222214 KRTAP12-2P59991 146 aa8.18□□□□□ -1.1
GCDH-201ENST00000222214 ROMO1P60602 79 aa8.16□□□□□ -1.1
GCDH-201ENST00000222214 SPINT4Q6UDR6 99 aa8.15□□□□□ -1.1
GCDH-201ENST00000222214 LCE2CQ5TA81 110 aa8.14□□□□□ -1.11
GCDH-201ENST00000222214 UBR4Q5T4S7 5183 aa8.11□□□□□ -1.11
GCDH-201ENST00000222214 LORP23490 312 aaPredicted RBP8.11□□□□□ -1.11
GCDH-201ENST00000222214 CRIPTQ9P021 101 aa8.1□□□□□ -1.11
GCDH-201ENST00000222214 LINC01554Q52M75 96 aa8.09□□□□□ -1.11
GCDH-201ENST00000222214 RNF213Q63HN8 5207 aa8.02□□□□□ -1.13
GCDH-201ENST00000222214 KRTAP25-1Q3LHN0 102 aa8□□□□□ -1.13
GCDH-201ENST00000222214 MT1HP80294 61 aa7.98□□□□□ -1.13
GCDH-201ENST00000222214 M0R2T5 61 aa7.97□□□□□ -1.13
GCDH-201ENST00000222214 FAT4Q6V0I7 4981 aa7.83□□□□□ -1.16
GCDH-201ENST00000222214 SPRR2GQ9BYE4 73 aa7.8□□□□□ -1.16
GCDH-201ENST00000222214 CAMK2N1Q7Z7J9 78 aa7.79□□□□□ -1.16
GCDH-201ENST00000222214 MT2AP02795 61 aa7.73□□□□□ -1.17
GCDH-201ENST00000222214 KRTAP9-8Q9BYQ0 159 aa7.73□□□□□ -1.17
GCDH-201ENST00000222214 C10orf95Q9H7T3 257 aa7.72□□□□□ -1.17
GCDH-201ENST00000222214 KRTAP10-10P60014 251 aa7.71□□□□□ -1.17
GCDH-201ENST00000222214 KRTAP19-1Q8IUB9 90 aa7.7□□□□□ -1.18
GCDH-201ENST00000222214 MT1FP04733 61 aa7.69□□□□□ -1.18
GCDH-201ENST00000222214 PLAC4Q8WY50 150 aa7.64□□□□□ -1.19
GCDH-201ENST00000222214 KRTAP19-8Q3LI54 63 aa7.53□□□□□ -1.2
GCDH-201ENST00000222214 PP632Q6XCG6 107 aa7.49□□□□□ -1.21
GCDH-201ENST00000222214 TNP1P09430 55 aa7.48□□□□□ -1.21
GCDH-201ENST00000222214 KRTAP9-3Q9BYQ3 159 aa7.44□□□□□ -1.22
GCDH-201ENST00000222214 LCE2AQ5TA79 106 aaPredicted RBP7.42□□□□□ -1.22
GCDH-201ENST00000222214 KRTAP23-1A1A580 65 aa7.4□□□□□ -1.23
GCDH-201ENST00000222214 MT1BP07438 61 aa7.37□□□□□ -1.23
GCDH-201ENST00000222214 H3BS24 57 aa7.23□□□□□ -1.25
GCDH-201ENST00000222214 KRTAP10-5P60370 271 aa7.21□□□□□ -1.26
GCDH-201ENST00000222214 MT1XP80297 61 aa7.21□□□□□ -1.26
GCDH-201ENST00000222214 PRO2289Q9P1D8 64 aa7.18□□□□□ -1.26
GCDH-201ENST00000222214 LCE2BO14633 110 aa7.15□□□□□ -1.27
GCDH-201ENST00000222214 KRTAP15-1Q3LI76 137 aa7.15□□□□□ -1.27
GCDH-201ENST00000222214 LCE3AQ5TA76 89 aa7.04□□□□□ -1.28
GCDH-201ENST00000222214 KRTAP10-12P60413 245 aa6.99□□□□□ -1.29
GCDH-201ENST00000222214 KRTAP8-1Q8IUC2 63 aa6.96□□□□□ -1.3
GCDH-201ENST00000222214 KRTAP10-7P60409 375 aaPredicted RBP6.92□□□□□ -1.3
GCDH-201ENST00000222214 NDUFAF8A1L188 74 aa6.9□□□□□ -1.3
GCDH-201ENST00000222214 USH2AO75445 5202 aa6.81□□□□□ -1.32
GCDH-201ENST00000222214 KRTAP12-3P60328 96 aa6.78□□□□□ -1.32
GCDH-201ENST00000222214 SPRR5A0A1B0GTR4 108 aa6.73□□□□□ -1.33
GCDH-201ENST00000222214 LUZP6Q538Z0 58 aa6.71□□□□□ -1.33
GCDH-201ENST00000222214 FSIP2Q5CZC0 6907 aa6.68□□□□□ -1.34
GCDH-201ENST00000222214 KRTAP19-6Q3LI70 58 aa6.68□□□□□ -1.34
GCDH-201ENST00000222214 LCE2DQ5TA82 110 aaPredicted RBP6.64□□□□□ -1.35
GCDH-201ENST00000222214 SSPOA2VEC9 5147 aa6.62□□□□□ -1.35
GCDH-201ENST00000222214 KRTAP19-5Q3LI72 72 aa6.59□□□□□ -1.35
GCDH-201ENST00000222214 KRTAP4-8A0A0G2JLE6 195 aa6.55□□□□□ -1.36
GCDH-201ENST00000222214 KRTAP4-8Q9BYQ9 185 aa6.55□□□□□ -1.36
GCDH-201ENST00000222214 KRTAP19-7Q3SYF9 63 aa6.43□□□□□ -1.38
GCDH-201ENST00000222214 KRTAP19-4Q3LI73 84 aa6.4□□□□□ -1.38
GCDH-201ENST00000222214 KMT2DO14686 5537 aa6.39□□□□□ -1.39
GCDH-201ENST00000222214 KRTAP9-2Q9BYQ4 174 aa6.37□□□□□ -1.39
GCDH-201ENST00000222214 LCE3CQ5T5A8 94 aa6.36□□□□□ -1.39
GCDH-201ENST00000222214 FCGBPQ9Y6R7 5405 aaPredicted RBP6.31□□□□□ -1.4
GCDH-201ENST00000222214 MT1EP04732 61 aa6.3□□□□□ -1.4
GCDH-201ENST00000222214 MT1LQ93083 61 aa6.22□□□□□ -1.41
GCDH-201ENST00000222214 A0A0A0MQY5 61 aa6.16□□□□□ -1.42
GCDH-201ENST00000222214 CRCT1Q9UGL9 99 aa6.11□□□□□ -1.43
GCDH-201ENST00000222214 MACF1Q9UPN3 7388 aaKnown RBP6.06□□□□□ -1.44
GCDH-201ENST00000222214 KRTAP4-7Q9BYR0 210 aa6.02□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms