RNA–Protein interactions for RNA: ENST00000220509.9

VPS18-201, Transcript of VPS18, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS18, Length 3,895 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS18-201ENST00000220509 RPS29P62273 56 aaKnown RBP5.72□□□□□ -1.49
VPS18-201ENST00000220509 A0A1B0GVY2 172 aa5.72□□□□□ -1.49
VPS18-201ENST00000220509 DYNC1H1Q14204 4646 aaKnown RBP5.69□□□□□ -1.5
VPS18-201ENST00000220509 H1FX-AS1Q4G0G2 97 aa5.69□□□□□ -1.5
VPS18-201ENST00000220509 S4R3F8 94 aa5.67□□□□□ -1.5
VPS18-201ENST00000220509 VPS13BQ7Z7G8 4022 aa5.66□□□□□ -1.5
VPS18-201ENST00000220509 KIAA1109Q2LD37 5005 aa5.66□□□□□ -1.5
VPS18-201ENST00000220509 FAT2Q9NYQ8 4349 aa5.63□□□□□ -1.51
VPS18-201ENST00000220509 ALMS1Q8TCU4 4167 aa5.61□□□□□ -1.51
VPS18-201ENST00000220509 RYR3Q15413 4870 aa5.61□□□□□ -1.51
VPS18-201ENST00000220509 RYR2Q92736 4967 aa5.6□□□□□ -1.51
VPS18-201ENST00000220509 APOBP04114 4563 aaKnown RBP5.58□□□□□ -1.52
VPS18-201ENST00000220509 LRP1Q07954 4544 aaKnown RBP5.58□□□□□ -1.52
VPS18-201ENST00000220509 PKD1P98161 4303 aa5.57□□□□□ -1.52
VPS18-201ENST00000220509 RPL37P61927 97 aaKnown RBP5.57□□□□□ -1.52
VPS18-201ENST00000220509 MYCBP2O75592 4640 aa5.56□□□□□ -1.52
VPS18-201ENST00000220509 FAT3Q8TDW7 4589 aa5.52□□□□□ -1.53
VPS18-201ENST00000220509 RYR1P21817 5038 aa5.51□□□□□ -1.53
VPS18-201ENST00000220509 EPPK1P58107 5090 aaKnown RBP5.5□□□□□ -1.53
VPS18-201ENST00000220509 XP32Q5T750 250 aa5.49□□□□□ -1.53
VPS18-201ENST00000220509 R4GN34 69 aa5.49□□□□□ -1.53
VPS18-201ENST00000220509 KRTAP10-4P60372 401 aaPredicted RBP5.47□□□□□ -1.53
VPS18-201ENST00000220509 KRTAP3-1Q9BYR8 98 aa5.47□□□□□ -1.53
VPS18-201ENST00000220509 KRTAP4-5Q9BYR2 181 aa5.47□□□□□ -1.53
VPS18-201ENST00000220509 KRTAP17-1Q9BYP8 105 aa5.46□□□□□ -1.54
VPS18-201ENST00000220509 PLAC4Q8WY50 150 aa5.45□□□□□ -1.54
VPS18-201ENST00000220509 M0QZ58 72 aa5.44□□□□□ -1.54
VPS18-201ENST00000220509 M0R2T5 61 aa5.44□□□□□ -1.54
VPS18-201ENST00000220509 KRTAP10-8P60410 259 aa5.43□□□□□ -1.54
VPS18-201ENST00000220509 KRTAP13-4Q3LI77 160 aa5.36□□□□□ -1.55
VPS18-201ENST00000220509 HSPG2P98160 4391 aa5.36□□□□□ -1.55
VPS18-201ENST00000220509 PRO2289Q9P1D8 64 aa5.32□□□□□ -1.56
VPS18-201ENST00000220509 MT1HL1P0DM35 61 aa5.31□□□□□ -1.56
VPS18-201ENST00000220509 KRTAP12-2P59991 146 aa5.27□□□□□ -1.57
VPS18-201ENST00000220509 KRTAP10-6P60371 365 aaPredicted RBP5.26□□□□□ -1.57
VPS18-201ENST00000220509 HERC2O95714 4834 aa5.24□□□□□ -1.57
VPS18-201ENST00000220509 LRP2P98164 4655 aa5.23□□□□□ -1.57
VPS18-201ENST00000220509 PKHD1L1Q86WI1 4243 aa5.21□□□□□ -1.58
VPS18-201ENST00000220509 ABCA13Q86UQ4 5058 aa5.21□□□□□ -1.58
VPS18-201ENST00000220509 LPAP08519 4548 aa5.2□□□□□ -1.58
VPS18-201ENST00000220509 KRTAP3-3Q9BYR6 98 aa5.15□□□□□ -1.58
VPS18-201ENST00000220509 KRTAP3-2Q9BYR7 98 aa5.15□□□□□ -1.59
VPS18-201ENST00000220509 KRTAP12-1P59990 96 aa5.14□□□□□ -1.59
VPS18-201ENST00000220509 KRTAP23-1A1A580 65 aa5.12□□□□□ -1.59
VPS18-201ENST00000220509 HERC1Q15751 4861 aa5.1□□□□□ -1.59
VPS18-201ENST00000220509 MUC2Q02817 5179 aa5.09□□□□□ -1.59
VPS18-201ENST00000220509 TNXBP22105 4242 aa5.08□□□□□ -1.6
VPS18-201ENST00000220509 BIRC6Q9NR09 4857 aa5.03□□□□□ -1.6
VPS18-201ENST00000220509 PCLOQ9Y6V0 5065 aa5.02□□□□□ -1.61
VPS18-201ENST00000220509 RNF213Q63HN8 5207 aa4.98□□□□□ -1.61
VPS18-201ENST00000220509 INE1O15225 51 aa4.96□□□□□ -1.62
VPS18-201ENST00000220509 TNP1P09430 55 aa4.93□□□□□ -1.62
VPS18-201ENST00000220509 KRTAP10-10P60014 251 aa4.91□□□□□ -1.62
VPS18-201ENST00000220509 KRTAP4-1Q9BYQ7 146 aa4.9□□□□□ -1.63
VPS18-201ENST00000220509 UBR4Q5T4S7 5183 aa4.89□□□□□ -1.63
VPS18-201ENST00000220509 FAT4Q6V0I7 4981 aa4.86□□□□□ -1.63
VPS18-201ENST00000220509 LORP23490 312 aaPredicted RBP4.81□□□□□ -1.64
VPS18-201ENST00000220509 PP632Q6XCG6 107 aa4.81□□□□□ -1.64
VPS18-201ENST00000220509 HMCN2Q8NDA2 5059 aa4.7□□□□□ -1.66
VPS18-201ENST00000220509 FSIP2Q5CZC0 6907 aa4.57□□□□□ -1.68
VPS18-201ENST00000220509 MUC17Q685J3 4493 aa4.56□□□□□ -1.68
VPS18-201ENST00000220509 MT1HP80294 61 aa4.5□□□□□ -1.69
VPS18-201ENST00000220509 SPRR5A0A1B0GTR4 108 aa4.49□□□□□ -1.69
VPS18-201ENST00000220509 FLGP20930 4061 aaPredicted RBP4.48□□□□□ -1.69
VPS18-201ENST00000220509 KRTAP19-2Q3LHN2 52 aa4.45□□□□□ -1.7
VPS18-201ENST00000220509 LCE2CQ5TA81 110 aa4.43□□□□□ -1.7
VPS18-201ENST00000220509 MT1FP04733 61 aa4.38□□□□□ -1.71
VPS18-201ENST00000220509 MT2AP02795 61 aa4.38□□□□□ -1.71
VPS18-201ENST00000220509 USH2AO75445 5202 aa4.36□□□□□ -1.71
VPS18-201ENST00000220509 LCE3AQ5TA76 89 aa4.33□□□□□ -1.72
VPS18-201ENST00000220509 KRTAP10-12P60413 245 aa4.32□□□□□ -1.72
VPS18-201ENST00000220509 OBSCNQ5VST9 7968 aa4.28□□□□□ -1.72
VPS18-201ENST00000220509 SPRR2GQ9BYE4 73 aa4.28□□□□□ -1.72
VPS18-201ENST00000220509 KRTAP19-1Q8IUB9 90 aa4.27□□□□□ -1.73
VPS18-201ENST00000220509 KRTAP9-8Q9BYQ0 159 aa4.25□□□□□ -1.73
VPS18-201ENST00000220509 KRTAP12-3P60328 96 aa4.23□□□□□ -1.73
VPS18-201ENST00000220509 CRCT1Q9UGL9 99 aa4.17□□□□□ -1.74
VPS18-201ENST00000220509 SYNE1Q8NF91 8797 aaKnown RBP4.13□□□□□ -1.75
VPS18-201ENST00000220509 KMT2DO14686 5537 aa4.1□□□□□ -1.75
VPS18-201ENST00000220509 KRTAP9-3Q9BYQ3 159 aa4.08□□□□□ -1.76
VPS18-201ENST00000220509 MT1BP07438 61 aa4.08□□□□□ -1.76
VPS18-201ENST00000220509 KRTAP19-8Q3LI54 63 aa4.04□□□□□ -1.76
VPS18-201ENST00000220509 LCE2BO14633 110 aa4.03□□□□□ -1.76
VPS18-201ENST00000220509 MT1XP80297 61 aa4.01□□□□□ -1.77
VPS18-201ENST00000220509 KRTAP10-7P60409 375 aaPredicted RBP4□□□□□ -1.77
VPS18-201ENST00000220509 LCE2AQ5TA79 106 aaPredicted RBP3.99□□□□□ -1.77
VPS18-201ENST00000220509 KRTAP10-5P60370 271 aa3.99□□□□□ -1.77
VPS18-201ENST00000220509 KRTAP8-1Q8IUC2 63 aa3.98□□□□□ -1.77
VPS18-201ENST00000220509 KRTAP19-5Q3LI72 72 aa3.95□□□□□ -1.78
VPS18-201ENST00000220509 KRTAP4-8A0A0G2JLE6 195 aa3.91□□□□□ -1.78
VPS18-201ENST00000220509 KRTAP4-8Q9BYQ9 185 aa3.91□□□□□ -1.78
VPS18-201ENST00000220509 SSPOA2VEC9 5147 aa3.87□□□□□ -1.79
VPS18-201ENST00000220509 KRTAP9-2Q9BYQ4 174 aa3.83□□□□□ -1.8
VPS18-201ENST00000220509 KRTAP9-6A0A140TA67 174 aa3.82□□□□□ -1.8
VPS18-201ENST00000220509 DSTQ03001 7570 aaKnown RBP3.82□□□□□ -1.8
VPS18-201ENST00000220509 LCE3CQ5T5A8 94 aa3.8□□□□□ -1.8
VPS18-201ENST00000220509 LCE2DQ5TA82 110 aaPredicted RBP3.74□□□□□ -1.81
VPS18-201ENST00000220509 MUC12Q9UKN1 5478 aa3.73□□□□□ -1.81
VPS18-201ENST00000220509 KRTAP4-7Q9BYR0 210 aa3.73□□□□□ -1.81
VPS18-201ENST00000220509 SYNE2Q8WXH0 6885 aaKnown RBP3.73□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms