RNA–Protein interactions for RNA: ENST00000217244.7

CSNK2A1-201, Transcript of casein kinase 2 alpha 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSNK2A1, Length 4,416 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK2A1-201ENST00000217244 KRTAP4-5Q9BYR2 181 aa4.48□□□□□ -1.69
CSNK2A1-201ENST00000217244 H3BS24 57 aa4.47□□□□□ -1.69
CSNK2A1-201ENST00000217244 KRTAP10-4P60372 401 aaPredicted RBP4.47□□□□□ -1.69
CSNK2A1-201ENST00000217244 R4GN34 69 aa4.46□□□□□ -1.7
CSNK2A1-201ENST00000217244 RYR1P21817 5038 aa4.46□□□□□ -1.7
CSNK2A1-201ENST00000217244 FAT3Q8TDW7 4589 aa4.46□□□□□ -1.7
CSNK2A1-201ENST00000217244 PKD1P98161 4303 aa4.46□□□□□ -1.7
CSNK2A1-201ENST00000217244 LRP1Q07954 4544 aaKnown RBP4.45□□□□□ -1.7
CSNK2A1-201ENST00000217244 M0QZ58 72 aa4.45□□□□□ -1.7
CSNK2A1-201ENST00000217244 A6NN06 94 aa4.44□□□□□ -1.7
CSNK2A1-201ENST00000217244 KRTAP3-1Q9BYR8 98 aa4.43□□□□□ -1.7
CSNK2A1-201ENST00000217244 FAT2Q9NYQ8 4349 aa4.43□□□□□ -1.7
CSNK2A1-201ENST00000217244 SACSQ9NZJ4 4579 aa4.42□□□□□ -1.7
CSNK2A1-201ENST00000217244 RYR3Q15413 4870 aa4.41□□□□□ -1.7
CSNK2A1-201ENST00000217244 APOBP04114 4563 aaKnown RBP4.4□□□□□ -1.7
CSNK2A1-201ENST00000217244 H0YAA0 97 aa4.4□□□□□ -1.71
CSNK2A1-201ENST00000217244 P0C880 135 aa4.39□□□□□ -1.71
CSNK2A1-201ENST00000217244 CAMK2N1Q7Z7J9 78 aa4.39□□□□□ -1.71
CSNK2A1-201ENST00000217244 MT1HL1P0DM35 61 aa4.38□□□□□ -1.71
CSNK2A1-201ENST00000217244 TPRXLQ17RH7 258 aa4.35□□□□□ -1.71
CSNK2A1-201ENST00000217244 KRTAP17-1Q9BYP8 105 aa4.32□□□□□ -1.72
CSNK2A1-201ENST00000217244 ROMO1P60602 79 aa4.3□□□□□ -1.72
CSNK2A1-201ENST00000217244 RYR2Q92736 4967 aa4.3□□□□□ -1.72
CSNK2A1-201ENST00000217244 C10orf95Q9H7T3 257 aa4.28□□□□□ -1.72
CSNK2A1-201ENST00000217244 EPPK1P58107 5090 aaKnown RBP4.26□□□□□ -1.73
CSNK2A1-201ENST00000217244 A0A0A0MQY5 61 aa4.24□□□□□ -1.73
CSNK2A1-201ENST00000217244 KRTAP13-4Q3LI77 160 aa4.23□□□□□ -1.73
CSNK2A1-201ENST00000217244 LRP2P98164 4655 aa4.21□□□□□ -1.74
CSNK2A1-201ENST00000217244 KRTAP25-1Q3LHN0 102 aa4.2□□□□□ -1.74
CSNK2A1-201ENST00000217244 KRTAP3-3Q9BYR6 98 aa4.19□□□□□ -1.74
CSNK2A1-201ENST00000217244 HSPG2P98160 4391 aa4.19□□□□□ -1.74
CSNK2A1-201ENST00000217244 KRTAP10-6P60371 365 aaPredicted RBP4.18□□□□□ -1.74
CSNK2A1-201ENST00000217244 KRTAP12-2P59991 146 aa4.17□□□□□ -1.74
CSNK2A1-201ENST00000217244 HERC2O95714 4834 aa4.14□□□□□ -1.75
CSNK2A1-201ENST00000217244 KRTAP3-2Q9BYR7 98 aa4.11□□□□□ -1.75
CSNK2A1-201ENST00000217244 TNXBP22105 4242 aa4.11□□□□□ -1.75
CSNK2A1-201ENST00000217244 LPAP08519 4548 aa4.11□□□□□ -1.75
CSNK2A1-201ENST00000217244 PLAC4Q8WY50 150 aa4.09□□□□□ -1.75
CSNK2A1-201ENST00000217244 KRTAP10-10P60014 251 aa4.08□□□□□ -1.76
CSNK2A1-201ENST00000217244 KRTAP4-1Q9BYQ7 146 aa4.08□□□□□ -1.76
CSNK2A1-201ENST00000217244 KRTAP12-1P59990 96 aa4.07□□□□□ -1.76
CSNK2A1-201ENST00000217244 ABCA13Q86UQ4 5058 aa4.06□□□□□ -1.76
CSNK2A1-201ENST00000217244 LORP23490 312 aaPredicted RBP4.05□□□□□ -1.76
CSNK2A1-201ENST00000217244 MUC2Q02817 5179 aa4.03□□□□□ -1.77
CSNK2A1-201ENST00000217244 LCE2DQ5TA82 110 aaPredicted RBP3.99□□□□□ -1.77
CSNK2A1-201ENST00000217244 HERC1Q15751 4861 aa3.98□□□□□ -1.77
CSNK2A1-201ENST00000217244 LUZP6Q538Z0 58 aa3.96□□□□□ -1.77
CSNK2A1-201ENST00000217244 NDUFAF8A1L188 74 aa3.96□□□□□ -1.78
CSNK2A1-201ENST00000217244 TNP1P09430 55 aa3.95□□□□□ -1.78
CSNK2A1-201ENST00000217244 RNF213Q63HN8 5207 aa3.94□□□□□ -1.78
CSNK2A1-201ENST00000217244 PCLOQ9Y6V0 5065 aa3.91□□□□□ -1.78
CSNK2A1-201ENST00000217244 BIRC6Q9NR09 4857 aa3.9□□□□□ -1.78
CSNK2A1-201ENST00000217244 UBR4Q5T4S7 5183 aa3.84□□□□□ -1.8
CSNK2A1-201ENST00000217244 FAT4Q6V0I7 4981 aa3.83□□□□□ -1.8
CSNK2A1-201ENST00000217244 MUC17Q685J3 4493 aa3.79□□□□□ -1.8
CSNK2A1-201ENST00000217244 PP632Q6XCG6 107 aa3.74□□□□□ -1.81
CSNK2A1-201ENST00000217244 FSIP2Q5CZC0 6907 aa3.72□□□□□ -1.81
CSNK2A1-201ENST00000217244 MT1HP80294 61 aa3.72□□□□□ -1.81
CSNK2A1-201ENST00000217244 FLGP20930 4061 aaPredicted RBP3.69□□□□□ -1.82
CSNK2A1-201ENST00000217244 MT1FP04733 61 aa3.67□□□□□ -1.82
CSNK2A1-201ENST00000217244 MT2AP02795 61 aa3.66□□□□□ -1.82
CSNK2A1-201ENST00000217244 PRO2289Q9P1D8 64 aa3.65□□□□□ -1.83
CSNK2A1-201ENST00000217244 HMCN2Q8NDA2 5059 aa3.61□□□□□ -1.83
CSNK2A1-201ENST00000217244 LCE2CQ5TA81 110 aa3.6□□□□□ -1.83
CSNK2A1-201ENST00000217244 LCE3AQ5TA76 89 aa3.59□□□□□ -1.83
CSNK2A1-201ENST00000217244 KRTAP19-2Q3LHN2 52 aa3.59□□□□□ -1.83
CSNK2A1-201ENST00000217244 KRTAP15-1Q3LI76 137 aa3.58□□□□□ -1.84
CSNK2A1-201ENST00000217244 KRTAP19-1Q8IUB9 90 aa3.56□□□□□ -1.84
CSNK2A1-201ENST00000217244 KRTAP10-12P60413 245 aa3.54□□□□□ -1.84
CSNK2A1-201ENST00000217244 SPRR2GQ9BYE4 73 aa3.53□□□□□ -1.84
CSNK2A1-201ENST00000217244 KRTAP9-8Q9BYQ0 159 aa3.49□□□□□ -1.85
CSNK2A1-201ENST00000217244 KRTAP12-3P60328 96 aa3.46□□□□□ -1.86
CSNK2A1-201ENST00000217244 USH2AO75445 5202 aa3.46□□□□□ -1.86
CSNK2A1-201ENST00000217244 MT1BP07438 61 aa3.4□□□□□ -1.87
CSNK2A1-201ENST00000217244 KRTAP10-7P60409 375 aaPredicted RBP3.4□□□□□ -1.87
CSNK2A1-201ENST00000217244 CRCT1Q9UGL9 99 aa3.39□□□□□ -1.87
CSNK2A1-201ENST00000217244 MT1XP80297 61 aa3.36□□□□□ -1.87
CSNK2A1-201ENST00000217244 KRTAP9-3Q9BYQ3 159 aa3.34□□□□□ -1.87
CSNK2A1-201ENST00000217244 KRTAP10-5P60370 271 aa3.34□□□□□ -1.87
CSNK2A1-201ENST00000217244 KRTAP4-8A0A0G2JLE6 195 aa3.33□□□□□ -1.88
CSNK2A1-201ENST00000217244 KRTAP19-8Q3LI54 63 aa3.33□□□□□ -1.88
CSNK2A1-201ENST00000217244 KRTAP4-8Q9BYQ9 185 aa3.33□□□□□ -1.88
CSNK2A1-201ENST00000217244 LCE2BO14633 110 aa3.31□□□□□ -1.88
CSNK2A1-201ENST00000217244 KRTAP19-5Q3LI72 72 aa3.3□□□□□ -1.88
CSNK2A1-201ENST00000217244 KMT2DO14686 5537 aa3.29□□□□□ -1.88
CSNK2A1-201ENST00000217244 KRTAP23-1A1A580 65 aa3.29□□□□□ -1.88
CSNK2A1-201ENST00000217244 OBSCNQ5VST9 7968 aa3.28□□□□□ -1.88
CSNK2A1-201ENST00000217244 KRTAP8-1Q8IUC2 63 aa3.25□□□□□ -1.89
CSNK2A1-201ENST00000217244 DSTQ03001 7570 aaKnown RBP3.21□□□□□ -1.9
CSNK2A1-201ENST00000217244 SYNE1Q8NF91 8797 aaKnown RBP3.19□□□□□ -1.9
CSNK2A1-201ENST00000217244 LCE2AQ5TA79 106 aaPredicted RBP3.17□□□□□ -1.9
CSNK2A1-201ENST00000217244 KRTAP4-7Q9BYR0 210 aa3.16□□□□□ -1.9
CSNK2A1-201ENST00000217244 SPRR2FQ96RM1 72 aa3.13□□□□□ -1.91
CSNK2A1-201ENST00000217244 FCGBPQ9Y6R7 5405 aaPredicted RBP3.12□□□□□ -1.91
CSNK2A1-201ENST00000217244 LCE3CQ5T5A8 94 aa3.11□□□□□ -1.91
CSNK2A1-201ENST00000217244 MUC12Q9UKN1 5478 aa3.02□□□□□ -1.93
CSNK2A1-201ENST00000217244 SSPOA2VEC9 5147 aa3.01□□□□□ -1.93
CSNK2A1-201ENST00000217244 SYNE2Q8WXH0 6885 aaKnown RBP3.01□□□□□ -1.93
CSNK2A1-201ENST00000217244 SPRR5A0A1B0GTR4 108 aa3□□□□□ -1.93
CSNK2A1-201ENST00000217244 MT1GP13640 62 aa3□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 73.6 ms