RNA–Protein interactions for RNA: ENST00000201963.3

DNMT3B-201, Transcript of DNA methyltransferase 3 beta, humanhuman

TSL 1 (best) BASIC

Gene DNMT3B, Length 4,255 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3B-201ENST00000201963 KRTAP3-1Q9BYR8 98 aa5.9□□□□□ -1.46
DNMT3B-201ENST00000201963 VPS13DQ5THJ4 4388 aa5.9□□□□□ -1.47
DNMT3B-201ENST00000201963 TPRXLQ17RH7 258 aa5.89□□□□□ -1.47
DNMT3B-201ENST00000201963 LYSTQ99698 3801 aa5.89□□□□□ -1.47
DNMT3B-201ENST00000201963 XP32Q5T750 250 aa5.88□□□□□ -1.47
DNMT3B-201ENST00000201963 SACSQ9NZJ4 4579 aa5.87□□□□□ -1.47
DNMT3B-201ENST00000201963 LRP1BQ9NZR2 4599 aa5.86□□□□□ -1.47
DNMT3B-201ENST00000201963 MT1HL1P0DM35 61 aa5.86□□□□□ -1.47
DNMT3B-201ENST00000201963 RYR2Q92736 4967 aa5.85□□□□□ -1.47
DNMT3B-201ENST00000201963 KRTAP12-2P59991 146 aa5.82□□□□□ -1.48
DNMT3B-201ENST00000201963 KRTAP10-4P60372 401 aaPredicted RBP5.82□□□□□ -1.48
DNMT3B-201ENST00000201963 DNAH3Q8TD57 4116 aa5.82□□□□□ -1.48
DNMT3B-201ENST00000201963 KRTAP13-4Q3LI77 160 aa5.77□□□□□ -1.49
DNMT3B-201ENST00000201963 BIRC6Q9NR09 4857 aa5.74□□□□□ -1.49
DNMT3B-201ENST00000201963 TNP1P09430 55 aa5.74□□□□□ -1.49
DNMT3B-201ENST00000201963 KRTAP10-6P60371 365 aaPredicted RBP5.74□□□□□ -1.49
DNMT3B-201ENST00000201963 HERC2O95714 4834 aa5.74□□□□□ -1.49
DNMT3B-201ENST00000201963 KRTAP12-1P59990 96 aa5.73□□□□□ -1.49
DNMT3B-201ENST00000201963 EPPK1P58107 5090 aaKnown RBP5.72□□□□□ -1.49
DNMT3B-201ENST00000201963 PP632Q6XCG6 107 aa5.71□□□□□ -1.49
DNMT3B-201ENST00000201963 DYNC2H1Q8NCM8 4307 aaKnown RBP5.71□□□□□ -1.49
DNMT3B-201ENST00000201963 DNAH17Q9UFH2 4485 aa5.71□□□□□ -1.5
DNMT3B-201ENST00000201963 KRTAP17-1Q9BYP8 105 aa5.71□□□□□ -1.5
DNMT3B-201ENST00000201963 APOBP04114 4563 aaKnown RBP5.68□□□□□ -1.5
DNMT3B-201ENST00000201963 DNAH7Q8WXX0 4024 aa5.68□□□□□ -1.5
DNMT3B-201ENST00000201963 DNAH2Q9P225 4427 aa5.67□□□□□ -1.5
DNMT3B-201ENST00000201963 PKHD1P08F94 4074 aa5.65□□□□□ -1.5
DNMT3B-201ENST00000201963 VPS13BQ7Z7G8 4022 aa5.64□□□□□ -1.51
DNMT3B-201ENST00000201963 FAT2Q9NYQ8 4349 aa5.62□□□□□ -1.51
DNMT3B-201ENST00000201963 FAT3Q8TDW7 4589 aa5.61□□□□□ -1.51
DNMT3B-201ENST00000201963 LRP1Q07954 4544 aaKnown RBP5.6□□□□□ -1.51
DNMT3B-201ENST00000201963 MYCBP2O75592 4640 aa5.6□□□□□ -1.51
DNMT3B-201ENST00000201963 KRTAP15-1Q3LI76 137 aa5.59□□□□□ -1.51
DNMT3B-201ENST00000201963 DNAH6Q9C0G6 4158 aa5.58□□□□□ -1.52
DNMT3B-201ENST00000201963 KRTAP3-2Q9BYR7 98 aa5.57□□□□□ -1.52
DNMT3B-201ENST00000201963 DNAH8Q96JB1 4490 aa5.56□□□□□ -1.52
DNMT3B-201ENST00000201963 KRTAP3-3Q9BYR6 98 aa5.54□□□□□ -1.52
DNMT3B-201ENST00000201963 KRTAP10-10P60014 251 aa5.51□□□□□ -1.53
DNMT3B-201ENST00000201963 FRAS1Q86XX4 4008 aa5.51□□□□□ -1.53
DNMT3B-201ENST00000201963 ABCA13Q86UQ4 5058 aa5.47□□□□□ -1.53
DNMT3B-201ENST00000201963 HSPG2P98160 4391 aa5.45□□□□□ -1.54
DNMT3B-201ENST00000201963 PCLOQ9Y6V0 5065 aa5.42□□□□□ -1.54
DNMT3B-201ENST00000201963 LRP2P98164 4655 aa5.41□□□□□ -1.54
DNMT3B-201ENST00000201963 HECTD4Q9Y4D8 3996 aa5.34□□□□□ -1.56
DNMT3B-201ENST00000201963 PKD1P98161 4303 aa5.32□□□□□ -1.56
DNMT3B-201ENST00000201963 HERC1Q15751 4861 aa5.32□□□□□ -1.56
DNMT3B-201ENST00000201963 KRTAP4-1Q9BYQ7 146 aa5.25□□□□□ -1.57
DNMT3B-201ENST00000201963 LORP23490 312 aaPredicted RBP5.15□□□□□ -1.58
DNMT3B-201ENST00000201963 UBR4Q5T4S7 5183 aa5.15□□□□□ -1.58
DNMT3B-201ENST00000201963 RNF213Q63HN8 5207 aa5.15□□□□□ -1.58
DNMT3B-201ENST00000201963 LPAP08519 4548 aa5.13□□□□□ -1.59
DNMT3B-201ENST00000201963 FSIP2Q5CZC0 6907 aa5.1□□□□□ -1.59
DNMT3B-201ENST00000201963 PRO2289Q9P1D8 64 aa5.03□□□□□ -1.6
DNMT3B-201ENST00000201963 MT1HP80294 61 aa5.03□□□□□ -1.6
DNMT3B-201ENST00000201963 INE1O15225 51 aa4.95□□□□□ -1.62
DNMT3B-201ENST00000201963 MUC2Q02817 5179 aa4.93□□□□□ -1.62
DNMT3B-201ENST00000201963 HMCN2Q8NDA2 5059 aa4.93□□□□□ -1.62
DNMT3B-201ENST00000201963 PKHD1L1Q86WI1 4243 aa4.9□□□□□ -1.62
DNMT3B-201ENST00000201963 LCE3AQ5TA76 89 aa4.88□□□□□ -1.63
DNMT3B-201ENST00000201963 KRTAP23-1A1A580 65 aa4.87□□□□□ -1.63
DNMT3B-201ENST00000201963 TNXBP22105 4242 aa4.86□□□□□ -1.63
DNMT3B-201ENST00000201963 MT2AP02795 61 aa4.84□□□□□ -1.64
DNMT3B-201ENST00000201963 FAT4Q6V0I7 4981 aa4.83□□□□□ -1.64
DNMT3B-201ENST00000201963 KRTAP10-12P60413 245 aa4.81□□□□□ -1.64
DNMT3B-201ENST00000201963 KRTAP12-3P60328 96 aa4.8□□□□□ -1.64
DNMT3B-201ENST00000201963 MT1FP04733 61 aa4.8□□□□□ -1.64
DNMT3B-201ENST00000201963 LCE2CQ5TA81 110 aa4.74□□□□□ -1.65
DNMT3B-201ENST00000201963 KRTAP9-2Q9BYQ4 174 aa4.61□□□□□ -1.67
DNMT3B-201ENST00000201963 KRTAP19-2Q3LHN2 52 aa4.61□□□□□ -1.67
DNMT3B-201ENST00000201963 KRTAP9-8Q9BYQ0 159 aa4.59□□□□□ -1.67
DNMT3B-201ENST00000201963 LCE2AQ5TA79 106 aaPredicted RBP4.55□□□□□ -1.68
DNMT3B-201ENST00000201963 SPRR2GQ9BYE4 73 aa4.53□□□□□ -1.68
DNMT3B-201ENST00000201963 CRCT1Q9UGL9 99 aa4.52□□□□□ -1.69
DNMT3B-201ENST00000201963 MUC17Q685J3 4493 aa4.51□□□□□ -1.69
DNMT3B-201ENST00000201963 KRTAP8-1Q8IUC2 63 aa4.48□□□□□ -1.69
DNMT3B-201ENST00000201963 KRTAP19-1Q8IUB9 90 aa4.47□□□□□ -1.69
DNMT3B-201ENST00000201963 SPRR5A0A1B0GTR4 108 aa4.46□□□□□ -1.7
DNMT3B-201ENST00000201963 FLGP20930 4061 aaPredicted RBP4.44□□□□□ -1.7
DNMT3B-201ENST00000201963 KRTAP9-3Q9BYQ3 159 aa4.44□□□□□ -1.7
DNMT3B-201ENST00000201963 LCE2BO14633 110 aa4.43□□□□□ -1.7
DNMT3B-201ENST00000201963 SPRR2FQ96RM1 72 aa4.39□□□□□ -1.71
DNMT3B-201ENST00000201963 KRTAP9-6A0A140TA67 174 aa4.38□□□□□ -1.71
DNMT3B-201ENST00000201963 USH2AO75445 5202 aa4.35□□□□□ -1.71
DNMT3B-201ENST00000201963 MT1BP07438 61 aa4.34□□□□□ -1.71
DNMT3B-201ENST00000201963 KRTAP10-5P60370 271 aa4.32□□□□□ -1.72
DNMT3B-201ENST00000201963 KRTAP19-5Q3LI72 72 aa4.32□□□□□ -1.72
DNMT3B-201ENST00000201963 KRTAP19-8Q3LI54 63 aa4.3□□□□□ -1.72
DNMT3B-201ENST00000201963 LCE3CQ5T5A8 94 aa4.29□□□□□ -1.72
DNMT3B-201ENST00000201963 KRTAP10-7P60409 375 aaPredicted RBP4.27□□□□□ -1.73
DNMT3B-201ENST00000201963 LCE2DQ5TA82 110 aaPredicted RBP4.25□□□□□ -1.73
DNMT3B-201ENST00000201963 KRTAP4-8A0A0G2JLE6 195 aa4.21□□□□□ -1.74
DNMT3B-201ENST00000201963 MT1XP80297 61 aa4.21□□□□□ -1.74
DNMT3B-201ENST00000201963 KRTAP4-8Q9BYQ9 185 aa4.21□□□□□ -1.74
DNMT3B-201ENST00000201963 SPRR2EP22531 72 aa4.15□□□□□ -1.74
DNMT3B-201ENST00000201963 SPRR2BP35325 72 aa4.15□□□□□ -1.74
DNMT3B-201ENST00000201963 SPRR2AP35326 72 aa4.15□□□□□ -1.74
DNMT3B-201ENST00000201963 SYNE2Q8WXH0 6885 aaKnown RBP4.14□□□□□ -1.75
DNMT3B-201ENST00000201963 KRTAP19-6Q3LI70 58 aa4.1□□□□□ -1.75
DNMT3B-201ENST00000201963 KRTAP9-7A8MTY7 169 aa4.06□□□□□ -1.76
DNMT3B-201ENST00000201963 SSPOA2VEC9 5147 aa4.05□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms