RNA–Protein interactions for RNA: ENST00000199706.12

MRPL28-201, Transcript of mitochondrial ribosomal protein L28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MRPL28, Length 1,098 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL28-201ENST00000199706 KLKP1Q107X0 134 aa8□□□□□ -1.13
MRPL28-201ENST00000199706 FAM236AA0A1B0GUQ0 79 aa7.98□□□□□ -1.13
MRPL28-201ENST00000199706 FAM236BA0A1B0GV22 79 aa7.98□□□□□ -1.13
MRPL28-201ENST00000199706 KRTAP19-1Q8IUB9 90 aa7.97□□□□□ -1.13
MRPL28-201ENST00000199706 FCGBPQ9Y6R7 5405 aaPredicted RBP7.96□□□□□ -1.14
MRPL28-201ENST00000199706 MT-ATP8P03928 68 aa7.96□□□□□ -1.14
MRPL28-201ENST00000199706 KRTAP19-6Q3LI70 58 aa7.95□□□□□ -1.14
MRPL28-201ENST00000199706 SMIM20Q8N5G0 67 aa7.95□□□□□ -1.14
MRPL28-201ENST00000199706 NDUFC1O43677 76 aa7.94□□□□□ -1.14
MRPL28-201ENST00000199706 PCP4P48539 62 aa7.93□□□□□ -1.14
MRPL28-201ENST00000199706 H0YAA0 97 aa7.92□□□□□ -1.14
MRPL28-201ENST00000199706 SPRR2GQ9BYE4 73 aa7.91□□□□□ -1.14
MRPL28-201ENST00000199706 TRAV7A0A075B6U4 112 aa7.88□□□□□ -1.15
MRPL28-201ENST00000199706 CRIPTQ9P021 101 aa7.88□□□□□ -1.15
MRPL28-201ENST00000199706 DMAC1Q96GE9 116 aa7.87□□□□□ -1.15
MRPL28-201ENST00000199706 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.84□□□□□ -1.15
MRPL28-201ENST00000199706 KRTAP19-8Q3LI54 63 aa7.83□□□□□ -1.16
MRPL28-201ENST00000199706 Q5VV11 94 aa7.77□□□□□ -1.17
MRPL28-201ENST00000199706 MT1BP07438 61 aa7.75□□□□□ -1.17
MRPL28-201ENST00000199706 ADM2Q7Z4H4 148 aa7.7□□□□□ -1.18
MRPL28-201ENST00000199706 ANAPC13Q9BS18 74 aa7.69□□□□□ -1.18
MRPL28-201ENST00000199706 KRTAP9-7A8MTY7 169 aa7.68□□□□□ -1.18
MRPL28-201ENST00000199706 ACYP2P14621 99 aa7.68□□□□□ -1.18
MRPL28-201ENST00000199706 C20orf197Q8N268 126 aa7.67□□□□□ -1.18
MRPL28-201ENST00000199706 SERP2Q8N6R1 65 aa7.67□□□□□ -1.18
MRPL28-201ENST00000199706 MACF1Q9UPN3 7388 aaKnown RBP7.67□□□□□ -1.18
MRPL28-201ENST00000199706 SPANXA2-OT1Q8N9U9 137 aa7.63□□□□□ -1.19
MRPL28-201ENST00000199706 SNURFQ9Y675 71 aa7.61□□□□□ -1.19
MRPL28-201ENST00000199706 SPTSSBQ8NFR3 76 aa7.6□□□□□ -1.19
MRPL28-201ENST00000199706 A6NN06 94 aa7.59□□□□□ -1.19
MRPL28-201ENST00000199706 KRTAP10-5P60370 271 aa7.57□□□□□ -1.2
MRPL28-201ENST00000199706 P0C880 135 aa7.55□□□□□ -1.2
MRPL28-201ENST00000199706 KRTAP3-2Q9BYR7 98 aa7.55□□□□□ -1.2
MRPL28-201ENST00000199706 SYNE2Q8WXH0 6885 aaKnown RBP7.55□□□□□ -1.2
MRPL28-201ENST00000199706 R4GN34 69 aa7.53□□□□□ -1.2
MRPL28-201ENST00000199706 CHKB-CPT1BH3BT56 60 aa7.5□□□□□ -1.21
MRPL28-201ENST00000199706 COX7CP15954 63 aa7.47□□□□□ -1.21
MRPL28-201ENST00000199706 M0QZ58 72 aa7.45□□□□□ -1.22
MRPL28-201ENST00000199706 KRTAP6-3Q3LI67 103 aa7.43□□□□□ -1.22
MRPL28-201ENST00000199706 CCDC179H3BU77 68 aa7.42□□□□□ -1.22
MRPL28-201ENST00000199706 PLAC4Q8WY50 150 aa7.4□□□□□ -1.22
MRPL28-201ENST00000199706 PRO2289Q9P1D8 64 aa7.39□□□□□ -1.23
MRPL28-201ENST00000199706 H7BZZ5 65 aa7.33□□□□□ -1.24
MRPL28-201ENST00000199706 MT1XP80297 61 aa7.32□□□□□ -1.24
MRPL28-201ENST00000199706 COA5Q86WW8 74 aa7.32□□□□□ -1.24
MRPL28-201ENST00000199706 LINC01554Q52M75 96 aa7.27□□□□□ -1.25
MRPL28-201ENST00000199706 CYSTM1Q9H1C7 97 aa7.26□□□□□ -1.25
MRPL28-201ENST00000199706 TMEM258P61165 79 aa7.24□□□□□ -1.25
MRPL28-201ENST00000199706 KRTAP5-9P26371 169 aa7.2□□□□□ -1.26
MRPL28-201ENST00000199706 KRTAP12-2P59991 146 aa7.19□□□□□ -1.26
MRPL28-201ENST00000199706 SEC61GP60059 68 aa7.15□□□□□ -1.26
MRPL28-201ENST00000199706 NEBP20929 6669 aa7.14□□□□□ -1.27
MRPL28-201ENST00000199706 ATP5EP56381 51 aaPredicted RBP7.14□□□□□ -1.27
MRPL28-201ENST00000199706 KRTAP13-4Q3LI77 160 aa7.12□□□□□ -1.27
MRPL28-201ENST00000199706 SERP1Q9Y6X1 66 aa7.12□□□□□ -1.27
MRPL28-201ENST00000199706 MUC12Q9UKN1 5478 aa7.11□□□□□ -1.27
MRPL28-201ENST00000199706 KMT2DO14686 5537 aa7.08□□□□□ -1.28
MRPL28-201ENST00000199706 RPS28P62857 69 aaKnown RBP7.08□□□□□ -1.28
MRPL28-201ENST00000199706 A0A1B0GU33 70 aa7□□□□□ -1.29
MRPL28-201ENST00000199706 KRTAP10-12P60413 245 aa6.99□□□□□ -1.29
MRPL28-201ENST00000199706 MDN1Q9NU22 5596 aa6.99□□□□□ -1.29
MRPL28-201ENST00000199706 KRTAP8-1Q8IUC2 63 aa6.98□□□□□ -1.29
MRPL28-201ENST00000199706 A0A1B0GU69 56 aa6.95□□□□□ -1.3
MRPL28-201ENST00000199706 KRTAP10-7P60409 375 aaPredicted RBP6.94□□□□□ -1.3
MRPL28-201ENST00000199706 CAMK2N1Q7Z7J9 78 aa6.93□□□□□ -1.3
MRPL28-201ENST00000199706 SPRR2FQ96RM1 72 aa6.93□□□□□ -1.3
MRPL28-201ENST00000199706 SPATA8Q6RVD6 105 aa6.9□□□□□ -1.3
MRPL28-201ENST00000199706 SMIM26A0A096LP01 95 aa6.89□□□□□ -1.31
MRPL28-201ENST00000199706 A0A0D9SG42 100 aa6.87□□□□□ -1.31
MRPL28-201ENST00000199706 KRTAP4-8A0A0G2JLE6 195 aa6.87□□□□□ -1.31
MRPL28-201ENST00000199706 KRTAP4-8Q9BYQ9 185 aa6.87□□□□□ -1.31
MRPL28-201ENST00000199706 PRR15LQ9BU68 103 aa6.83□□□□□ -1.32
MRPL28-201ENST00000199706 KRTAP12-1P59990 96 aa6.82□□□□□ -1.32
MRPL28-201ENST00000199706 LINC01558Q9Y6Z2 57 aa6.79□□□□□ -1.32
MRPL28-201ENST00000199706 SPRR2EP22531 72 aa6.78□□□□□ -1.32
MRPL28-201ENST00000199706 SPRR2BP35325 72 aa6.78□□□□□ -1.32
MRPL28-201ENST00000199706 SPRR2AP35326 72 aa6.78□□□□□ -1.32
MRPL28-201ENST00000199706 SPINT4Q6UDR6 99 aa6.77□□□□□ -1.33
MRPL28-201ENST00000199706 LCE1AQ5T7P2 110 aa6.76□□□□□ -1.33
MRPL28-201ENST00000199706 KRTAP20-1Q3LI63 56 aa6.75□□□□□ -1.33
MRPL28-201ENST00000199706 V9GYY9 64 aa6.74□□□□□ -1.33
MRPL28-201ENST00000199706 A8MU10 97 aa6.68□□□□□ -1.34
MRPL28-201ENST00000199706 KRTAP2-3P0C7H8 128 aa6.65□□□□□ -1.34
MRPL28-201ENST00000199706 Q1T7F1 81 aa6.65□□□□□ -1.34
MRPL28-201ENST00000199706 KRTAP2-4Q9BYR9 128 aa6.65□□□□□ -1.34
MRPL28-201ENST00000199706 UQCR11O14957 56 aa6.6□□□□□ -1.35
MRPL28-201ENST00000199706 SPRR2DP22532 72 aa6.56□□□□□ -1.36
MRPL28-201ENST00000199706 KRTAP19-7Q3SYF9 63 aa6.55□□□□□ -1.36
MRPL28-201ENST00000199706 PSPHP1O15172 72 aa6.5□□□□□ -1.37
MRPL28-201ENST00000199706 MT1EP04732 61 aa6.49□□□□□ -1.37
MRPL28-201ENST00000199706 C10orf95Q9H7T3 257 aa6.48□□□□□ -1.37
MRPL28-201ENST00000199706 TNP1P09430 55 aa6.47□□□□□ -1.37
MRPL28-201ENST00000199706 BRK1Q8WUW1 75 aa6.46□□□□□ -1.38
MRPL28-201ENST00000199706 KRTAP2-2Q9BYT5 123 aa6.45□□□□□ -1.38
MRPL28-201ENST00000199706 KRTAP2-1Q9BYU5 128 aa6.45□□□□□ -1.38
MRPL28-201ENST00000199706 MIR22HGQ0VDD5 57 aa6.43□□□□□ -1.38
MRPL28-201ENST00000199706 LCE5AQ5TCM9 118 aa6.42□□□□□ -1.38
MRPL28-201ENST00000199706 PRO0628Q9UI54 55 aa6.42□□□□□ -1.38
MRPL28-201ENST00000199706 KRTAP19-3Q7Z4W3 81 aa6.4□□□□□ -1.38
MRPL28-201ENST00000199706 A6NED7 52 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 79.2 ms