RNA–Protein interactions for RNA: ENSMUST00000176172.7

Cux1-206, Transcript of Homeobox protein cut-like 1, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Cux1, Length 4,882 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cux1-206ENSMUST00000176172 Gm29289A0A087WPY7 166 aa13.44□□□□□ -0.26
Cux1-206ENSMUST00000176172 Gm4064A0A087WR82 380 aa13.44□□□□□ -0.26
Cux1-206ENSMUST00000176172 Gm10352B2RWR6 380 aa13.44□□□□□ -0.26
Cux1-206ENSMUST00000176172 Gm21693J3QK27 380 aa13.44□□□□□ -0.26
Cux1-206ENSMUST00000176172 Rbmy1a1O35698 380 aa13.44□□□□□ -0.26
Cux1-206ENSMUST00000176172 SelenokQ9JLJ1 94 aa13.44□□□□□ -0.26
Cux1-206ENSMUST00000176172 Adamts9E9PUN6 1931 aa13.43□□□□□ -0.26
Cux1-206ENSMUST00000176172 Trav7-2Q5R1I3 112 aa13.43□□□□□ -0.26
Cux1-206ENSMUST00000176172 Cd300eQ8K249 196 aa13.43□□□□□ -0.26
Cux1-206ENSMUST00000176172 Dph3Q8K0W9 82 aa13.43□□□□□ -0.26
Cux1-206ENSMUST00000176172 Pcdh15Q99PJ1 1943 aa13.43□□□□□ -0.26
Cux1-206ENSMUST00000176172 Gm8251F6VUT6 1994 aa13.43□□□□□ -0.26
Cux1-206ENSMUST00000176172 Bcl6bO88282 474 aa13.42□□□□□ -0.26
Cux1-206ENSMUST00000176172 Hbb-b2P02089 147 aa13.42□□□□□ -0.26
Cux1-206ENSMUST00000176172 Wipf2Q6PEV3 440 aa13.42□□□□□ -0.26
Cux1-206ENSMUST00000176172 Igkv4-70A0A0B4J1I5 116 aa13.42□□□□□ -0.26
Cux1-206ENSMUST00000176172 Kif26aQ52KG5 1881 aa13.42□□□□□ -0.26
Cux1-206ENSMUST00000176172 Gm20379A0A087WR34 119 aa13.42□□□□□ -0.26
Cux1-206ENSMUST00000176172 Prr3Q811B5 190 aaKnown RBP13.42□□□□□ -0.26
Cux1-206ENSMUST00000176172 Fancd2osQ9D4K4 178 aa13.42□□□□□ -0.26
Cux1-206ENSMUST00000176172 Sp5Q9JHX2 398 aa13.42□□□□□ -0.26
Cux1-206ENSMUST00000176172 Cd69P37217 199 aa13.42□□□□□ -0.26
Cux1-206ENSMUST00000176172 Dmrtc2Q8CGW9 370 aa13.42□□□□□ -0.26
Cux1-206ENSMUST00000176172 P01811 117 aa13.41□□□□□ -0.26
Cux1-206ENSMUST00000176172 Tdgf1P51865 171 aa13.41□□□□□ -0.26
Cux1-206ENSMUST00000176172 P01792 123 aa13.41□□□□□ -0.26
Cux1-206ENSMUST00000176172 Prok1Q14A28 105 aa13.41□□□□□ -0.26
Cux1-206ENSMUST00000176172 Tmem30bQ8BHG3 353 aa13.41□□□□□ -0.26
Cux1-206ENSMUST00000176172 Mfap4Q9D1H9 257 aa13.41□□□□□ -0.26
Cux1-206ENSMUST00000176172 Sfta2E9PXB6 77 aa13.4□□□□□ -0.26
Cux1-206ENSMUST00000176172 Fam216bQ8CC14 138 aa13.4□□□□□ -0.26
Cux1-206ENSMUST00000176172 Q8R092 253 aa13.4□□□□□ -0.26
Cux1-206ENSMUST00000176172 Dpm2Q9Z324 84 aa13.4□□□□□ -0.26
Cux1-206ENSMUST00000176172 Gm15080A2BI02 449 aa13.4□□□□□ -0.26
Cux1-206ENSMUST00000176172 Gm20517G3UVU6 152 aa13.4□□□□□ -0.26
Cux1-206ENSMUST00000176172 9130213A22RikQ3V3T2 120 aa13.4□□□□□ -0.26
Cux1-206ENSMUST00000176172 Pom121l2Q5SW25 972 aa13.4□□□□□ -0.26
Cux1-206ENSMUST00000176172 Nup210lQ9D2F7 1881 aa13.39□□□□□ -0.27
Cux1-206ENSMUST00000176172 Gm29423A0A087WRM1 55 aa13.39□□□□□ -0.27
Cux1-206ENSMUST00000176172 Defa-rs12P50716 91 aa13.39□□□□□ -0.27
Cux1-206ENSMUST00000176172 Tcl1b4P56844 120 aa13.39□□□□□ -0.27
Cux1-206ENSMUST00000176172 Tspan13Q9D8C2 204 aa13.39□□□□□ -0.27
Cux1-206ENSMUST00000176172 Rs1Q9Z1L4 224 aa13.39□□□□□ -0.27
Cux1-206ENSMUST00000176172 Ighv1-19A0A0A6YWX0 117 aa13.39□□□□□ -0.27
Cux1-206ENSMUST00000176172 Gm21370Q3T9V6 190 aa13.39□□□□□ -0.27
Cux1-206ENSMUST00000176172 Isg15Q64339 161 aaKnown RBP13.39□□□□□ -0.27
Cux1-206ENSMUST00000176172 Igkv1-99F6XWB2 120 aa13.39□□□□□ -0.27
Cux1-206ENSMUST00000176172 TdhQ8K3F7 373 aa13.39□□□□□ -0.27
Cux1-206ENSMUST00000176172 Ighv3-8A0A075B5T0 131 aa13.39□□□□□ -0.27
Cux1-206ENSMUST00000176172 Klk1b4P00757 256 aa13.39□□□□□ -0.27
Cux1-206ENSMUST00000176172 FancmQ8BGE5 2021 aa13.38□□□□□ -0.27
Cux1-206ENSMUST00000176172 Q8C708 225 aa13.38□□□□□ -0.27
Cux1-206ENSMUST00000176172 P01789 122 aa13.38□□□□□ -0.27
Cux1-206ENSMUST00000176172 Ighv1-58A0A075B5W9 117 aa13.38□□□□□ -0.27
Cux1-206ENSMUST00000176172 Gm5294J3QP53 216 aa13.38□□□□□ -0.27
Cux1-206ENSMUST00000176172 Ube2v1Q9CZY3 147 aa13.38□□□□□ -0.27
Cux1-206ENSMUST00000176172 VsirQ9D659 308 aa13.38□□□□□ -0.27
Cux1-206ENSMUST00000176172 ApomQ9Z1R3 190 aa13.38□□□□□ -0.27
Cux1-206ENSMUST00000176172 C730034F03RikQ8BGL5 111 aa13.38□□□□□ -0.27
Cux1-206ENSMUST00000176172 Dennd4aE9Q8V6 1869 aa13.37□□□□□ -0.27
Cux1-206ENSMUST00000176172 SeboxP70368 190 aa13.37□□□□□ -0.27
Cux1-206ENSMUST00000176172 Vmo1Q5SXG7 201 aa13.37□□□□□ -0.27
Cux1-206ENSMUST00000176172 Leap2Q91V13 76 aa13.37□□□□□ -0.27
Cux1-206ENSMUST00000176172 Ssbp2Q9CYZ8 361 aa13.37□□□□□ -0.27
Cux1-206ENSMUST00000176172 KprpB2RUR4 657 aa13.37□□□□□ -0.27
Cux1-206ENSMUST00000176172 Gm37988J3QM41 62 aa13.36□□□□□ -0.27
Cux1-206ENSMUST00000176172 Ighv3-6P18531 116 aa13.36□□□□□ -0.27
Cux1-206ENSMUST00000176172 Ankrd39Q9D2X0 183 aa13.36□□□□□ -0.27
Cux1-206ENSMUST00000176172 Tmem131O70472 1877 aa13.36□□□□□ -0.27
Cux1-206ENSMUST00000176172 Zic4Q61467 341 aa13.36□□□□□ -0.27
Cux1-206ENSMUST00000176172 Ndufa4Q62425 82 aaKnown RBP13.36□□□□□ -0.27
Cux1-206ENSMUST00000176172 Tusc5Q8C838 173 aa13.36□□□□□ -0.27
Cux1-206ENSMUST00000176172 Rnf114Q9ET26 229 aa13.36□□□□□ -0.27
Cux1-206ENSMUST00000176172 Plxna2P70207 1894 aa13.35□□□□□ -0.27
Cux1-206ENSMUST00000176172 Q08AU9 97 aa13.35□□□□□ -0.27
Cux1-206ENSMUST00000176172 Ndufc2Q9CQ54 120 aa13.35□□□□□ -0.27
Cux1-206ENSMUST00000176172 F930015N05RikQ8C3A3 210 aa13.35□□□□□ -0.27
Cux1-206ENSMUST00000176172 Gtsf1Q9DAN6 167 aa13.35□□□□□ -0.27
Cux1-206ENSMUST00000176172 Vwa8Q8CC88 1905 aa13.35□□□□□ -0.27
Cux1-206ENSMUST00000176172 SNORCQ9CXL7 121 aa13.35□□□□□ -0.27
Cux1-206ENSMUST00000176172 Gm12169F2Z474 250 aa13.34□□□□□ -0.27
Cux1-206ENSMUST00000176172 Ccl21aP84444 133 aa13.34□□□□□ -0.27
Cux1-206ENSMUST00000176172 Ccl21bP86792 133 aa13.34□□□□□ -0.27
Cux1-206ENSMUST00000176172 Ccl21cP86793 133 aa13.34□□□□□ -0.27
Cux1-206ENSMUST00000176172 Taf15Q8BQ46 557 aaKnown RBP13.34□□□□□ -0.27
Cux1-206ENSMUST00000176172 F5O88783 2183 aa13.34□□□□□ -0.27
Cux1-206ENSMUST00000176172 Igkv3-2A0A075B5P0 119 aa13.34□□□□□ -0.27
Cux1-206ENSMUST00000176172 Defa20Q45VN2 95 aa13.34□□□□□ -0.27
Cux1-206ENSMUST00000176172 Defa2P28309 93 aa13.34□□□□□ -0.27
Cux1-206ENSMUST00000176172 Rspo3Q2TJ95 277 aa13.34□□□□□ -0.27
Cux1-206ENSMUST00000176172 Trav3-1Q5R1I8 114 aa13.34□□□□□ -0.27
Cux1-206ENSMUST00000176172 Igkv3-1A0A075B5P1 119 aa13.34□□□□□ -0.27
Cux1-206ENSMUST00000176172 P04940 107 aa13.34□□□□□ -0.27
Cux1-206ENSMUST00000176172 P04941 107 aa13.34□□□□□ -0.27
Cux1-206ENSMUST00000176172 Card19Q9D1I2 183 aa13.34□□□□□ -0.27
Cux1-206ENSMUST00000176172 Lyg1Q9D7Q0 197 aa13.34□□□□□ -0.27
Cux1-206ENSMUST00000176172 Ighv5-9-1A0A0A6YVS4 126 aa13.33□□□□□ -0.28
Cux1-206ENSMUST00000176172 Trav14n-2A0A0G2JDF5 121 aa13.33□□□□□ -0.28
Cux1-206ENSMUST00000176172 P01630 113 aa13.33□□□□□ -0.28
Cux1-206ENSMUST00000176172 Trav7d-3Q5R1I1 112 aa13.33□□□□□ -0.28
Retrieved 100 of 22,080 RNA–protein pairs in 74 ms