RNA–Protein interactions for RNA: ENSMUST00000088349.2

Col9a1-202, Transcript of Collagen alpha-1(IX) chain, mousemouse

TSL 1 (best) BASIC

Gene Col9a1, Length 3,059 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a1-202ENSMUST00000088349 Omt2bD3YX29 119 aa9.03□□□□□ -0.96
Col9a1-202ENSMUST00000088349 RbpjP31266 526 aa9.03□□□□□ -0.96
Col9a1-202ENSMUST00000088349 Gm7489Q3UT34 171 aa9.03□□□□□ -0.96
Col9a1-202ENSMUST00000088349 Pxt1Q8K459 51 aa9.03□□□□□ -0.96
Col9a1-202ENSMUST00000088349 RpeQ8VEE0 228 aa9.03□□□□□ -0.96
Col9a1-202ENSMUST00000088349 Olfr1431Q8VF59 312 aa9.03□□□□□ -0.96
Col9a1-202ENSMUST00000088349 Gnb1lQ9EQ15 326 aa9.03□□□□□ -0.96
Col9a1-202ENSMUST00000088349 Plekhb2Q9QZC7 221 aa9.03□□□□□ -0.96
Col9a1-202ENSMUST00000088349 Rabac1Q9Z0S9 185 aa9.03□□□□□ -0.96
Col9a1-202ENSMUST00000088349 Tmem141A2AJB2 108 aa9.03□□□□□ -0.96
Col9a1-202ENSMUST00000088349 Defa34D3Z0J0 93 aa9.03□□□□□ -0.96
Col9a1-202ENSMUST00000088349 Gm10036E9PYL9 178 aaKnown RBP9.03□□□□□ -0.96
Col9a1-202ENSMUST00000088349 Smad7O35253 426 aa9.03□□□□□ -0.96
Col9a1-202ENSMUST00000088349 LtaP09225 202 aa9.03□□□□□ -0.96
Col9a1-202ENSMUST00000088349 NdpP48744 131 aa9.03□□□□□ -0.96
Col9a1-202ENSMUST00000088349 Fxyd7P59648 80 aa9.03□□□□□ -0.96
Col9a1-202ENSMUST00000088349 Slc25a16Q8C0K5 332 aa9.03□□□□□ -0.96
Col9a1-202ENSMUST00000088349 Tspo2Q9CRZ8 162 aa9.03□□□□□ -0.96
Col9a1-202ENSMUST00000088349 Gfra1P97785 468 aa9.02□□□□□ -0.97
Col9a1-202ENSMUST00000088349 Gm10604Q3V0X7 143 aa9.02□□□□□ -0.97
Col9a1-202ENSMUST00000088349 Esp23A8R0V5 104 aa9.02□□□□□ -0.97
Col9a1-202ENSMUST00000088349 Mtatp8P03930 67 aa9.02□□□□□ -0.97
Col9a1-202ENSMUST00000088349 Ripply2Q2WG76 128 aa9.02□□□□□ -0.97
Col9a1-202ENSMUST00000088349 Stxbp6Q8R3T5 210 aa9.02□□□□□ -0.97
Col9a1-202ENSMUST00000088349 Tmem97Q8VD00 176 aa9.02□□□□□ -0.97
Col9a1-202ENSMUST00000088349 Plrg1Q922V4 513 aaKnown RBP9.02□□□□□ -0.97
Col9a1-202ENSMUST00000088349 Wfdc2Q9DAU7 174 aa9.02□□□□□ -0.97
Col9a1-202ENSMUST00000088349 Sec11aQ9R0P6 179 aa9.02□□□□□ -0.97
Col9a1-202ENSMUST00000088349 Gm26920S4R2A5 56 aa9.02□□□□□ -0.97
Col9a1-202ENSMUST00000088349 AhspQ9CY02 102 aa9.01□□□□□ -0.97
Col9a1-202ENSMUST00000088349 Slc25a20Q9Z2Z6 301 aaKnown RBP9.01□□□□□ -0.97
Col9a1-202ENSMUST00000088349 Gm10073E9Q3T0 114 aa9.01□□□□□ -0.97
Col9a1-202ENSMUST00000088349 Smim15Q3UTD9 74 aa9.01□□□□□ -0.97
Col9a1-202ENSMUST00000088349 Olfr873Q8VFJ0 319 aa9.01□□□□□ -0.97
Col9a1-202ENSMUST00000088349 FlncQ8VHX6 2726 aaKnown RBP9.01□□□□□ -0.97
Col9a1-202ENSMUST00000088349 Utp20Q5XG71 2788 aaKnown RBP9.01□□□□□ -0.97
Col9a1-202ENSMUST00000088349 Gm9242J3QNY1 357 aa9.01□□□□□ -0.97
Col9a1-202ENSMUST00000088349 9130230L23RikQ8CC80 163 aa9.01□□□□□ -0.97
Col9a1-202ENSMUST00000088349 Ube2tQ9CQ37 204 aa9.01□□□□□ -0.97
Col9a1-202ENSMUST00000088349 Hspb8Q9JK92 196 aa9.01□□□□□ -0.97
Col9a1-202ENSMUST00000088349 Arpc1aQ9R0Q6 370 aa9.01□□□□□ -0.97
Col9a1-202ENSMUST00000088349 Kmt2bO08550 2713 aa9.01□□□□□ -0.97
Col9a1-202ENSMUST00000088349 BatfO35284 125 aa9□□□□□ -0.97
Col9a1-202ENSMUST00000088349 Prrx2Q06348 247 aa9□□□□□ -0.97
Col9a1-202ENSMUST00000088349 Erg28Q9ERY9 140 aa9□□□□□ -0.97
Col9a1-202ENSMUST00000088349 Ighv1-31A0A0A6YWK5 117 aa9□□□□□ -0.97
Col9a1-202ENSMUST00000088349 Slc16a4Q8R0M8 500 aa9□□□□□ -0.97
Col9a1-202ENSMUST00000088349 Rab1bQ9D1G1 201 aa9□□□□□ -0.97
Col9a1-202ENSMUST00000088349 Spcs1Q9D958 161 aa9□□□□□ -0.97
Col9a1-202ENSMUST00000088349 Cnn3Q9DAW9 330 aaKnown RBP9□□□□□ -0.97
Col9a1-202ENSMUST00000088349 Myo9aQ8C170 2542 aa8.99□□□□□ -0.97
Col9a1-202ENSMUST00000088349 E030018B13RikJ3QMS9 113 aa8.99□□□□□ -0.97
Col9a1-202ENSMUST00000088349 Spint3Q3UW09 88 aa8.99□□□□□ -0.97
Col9a1-202ENSMUST00000088349 Prima1Q810F0 153 aa8.99□□□□□ -0.97
Col9a1-202ENSMUST00000088349 Gm4763Q8CFJ5 196 aa8.99□□□□□ -0.97
Col9a1-202ENSMUST00000088349 Obp2aQ8K1H9 176 aa8.99□□□□□ -0.97
Col9a1-202ENSMUST00000088349 Map1lc3aQ91VR7 121 aa8.99□□□□□ -0.97
Col9a1-202ENSMUST00000088349 Tmem8bB1AWJ5 472 aa8.99□□□□□ -0.97
Col9a1-202ENSMUST00000088349 Znf239P24399 201 aa8.99□□□□□ -0.97
Col9a1-202ENSMUST00000088349 Rpl24Q8BP67 157 aaKnown RBP8.99□□□□□ -0.97
Col9a1-202ENSMUST00000088349 Aqp6Q8C4A0 293 aa8.99□□□□□ -0.97
Col9a1-202ENSMUST00000088349 A730015C16RikQ8C992 119 aa8.99□□□□□ -0.97
Col9a1-202ENSMUST00000088349 Dusp14Q9JLY7 198 aa8.99□□□□□ -0.97
Col9a1-202ENSMUST00000088349 Gm12057A0A087WR21 115 aa8.99□□□□□ -0.97
Col9a1-202ENSMUST00000088349 Ighv1-37A0A0A6YW32 117 aa8.99□□□□□ -0.97
Col9a1-202ENSMUST00000088349 Ccdc71lE9Q4T4 218 aa8.99□□□□□ -0.97
Col9a1-202ENSMUST00000088349 Itgb1bp1O35671 200 aa8.99□□□□□ -0.97
Col9a1-202ENSMUST00000088349 Gm12888Q3UW77 119 aa8.99□□□□□ -0.97
Col9a1-202ENSMUST00000088349 Olfr810Q8VFH9 312 aa8.99□□□□□ -0.97
Col9a1-202ENSMUST00000088349 Sdk1Q3UH53 2193 aa8.98□□□□□ -0.97
Col9a1-202ENSMUST00000088349 Gm29289A0A087WPY7 166 aa8.98□□□□□ -0.97
Col9a1-202ENSMUST00000088349 Gm4064A0A087WR82 380 aa8.98□□□□□ -0.97
Col9a1-202ENSMUST00000088349 Gm10352B2RWR6 380 aa8.98□□□□□ -0.97
Col9a1-202ENSMUST00000088349 Gm21693J3QK27 380 aa8.98□□□□□ -0.97
Col9a1-202ENSMUST00000088349 Rbmy1a1O35698 380 aa8.98□□□□□ -0.97
Col9a1-202ENSMUST00000088349 P01756 117 aa8.98□□□□□ -0.97
Col9a1-202ENSMUST00000088349 P01757 117 aa8.98□□□□□ -0.97
Col9a1-202ENSMUST00000088349 Htr1dQ61224 374 aa8.98□□□□□ -0.97
Col9a1-202ENSMUST00000088349 Vsig8Q6P3A4 417 aa8.98□□□□□ -0.97
Col9a1-202ENSMUST00000088349 Hoxc12Q8K5B8 280 aa8.98□□□□□ -0.97
Col9a1-202ENSMUST00000088349 Fbxl15Q91W61 300 aa8.98□□□□□ -0.97
Col9a1-202ENSMUST00000088349 Ubtd1Q91WB7 227 aa8.98□□□□□ -0.97
Col9a1-202ENSMUST00000088349 CtrlQ9ER05 264 aa8.98□□□□□ -0.97
Col9a1-202ENSMUST00000088349 Ankhd1E9PUR0 2548 aaKnown RBP8.98□□□□□ -0.97
Col9a1-202ENSMUST00000088349 Trav21-dv12A0A075B6C4 109 aa8.98□□□□□ -0.97
Col9a1-202ENSMUST00000088349 Cited2O35740 269 aa8.98□□□□□ -0.97
Col9a1-202ENSMUST00000088349 Gata3P23772 443 aa8.98□□□□□ -0.97
Col9a1-202ENSMUST00000088349 Svs5P30933 122 aa8.98□□□□□ -0.97
Col9a1-202ENSMUST00000088349 Defb33Q30KN3 62 aa8.98□□□□□ -0.97
Col9a1-202ENSMUST00000088349 Tmem136Q3TYE7 245 aa8.98□□□□□ -0.97
Col9a1-202ENSMUST00000088349 Ufc1Q9CR09 167 aa8.98□□□□□ -0.97
Col9a1-202ENSMUST00000088349 Rab9aQ9R0M6 201 aa8.98□□□□□ -0.97
Col9a1-202ENSMUST00000088349 Ighv2-6A0A075B6A7 116 aa8.97□□□□□ -0.97
Col9a1-202ENSMUST00000088349 Ighv1-20A0A0A6YX66 117 aa8.97□□□□□ -0.97
Col9a1-202ENSMUST00000088349 LoxP28301 411 aa8.97□□□□□ -0.97
Col9a1-202ENSMUST00000088349 Pde6hP61249 83 aa8.97□□□□□ -0.97
Col9a1-202ENSMUST00000088349 Olfr976Q8VF15 326 aa8.97□□□□□ -0.97
Col9a1-202ENSMUST00000088349 Gcn1E9PVA8 2671 aaKnown RBP8.97□□□□□ -0.97
Col9a1-202ENSMUST00000088349 Gm6525A0A0A6YW33 106 aa8.97□□□□□ -0.97
Col9a1-202ENSMUST00000088349 Gm2174F6ZVF2 133 aa8.97□□□□□ -0.97
Retrieved 100 of 22,080 RNA–protein pairs in 33.7 ms