RNA–Protein interactions for RNA: ENSMUST00000065304.11

Rtn3-202, Transcript of Reticulon-3, mousemouse

TSL 1 (best) BASIC

Gene Rtn3, Length 5,030 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn3-202ENSMUST00000065304 Ighv1-39A0A075B5V5 117 aa9.09□□□□□ -0.95
Rtn3-202ENSMUST00000065304 Trav9-1A0A075B601 112 aa9.09□□□□□ -0.95
Rtn3-202ENSMUST00000065304 Trav9d-1A0A075B699 112 aa9.09□□□□□ -0.95
Rtn3-202ENSMUST00000065304 Gm15091B1AZM2 449 aa9.09□□□□□ -0.95
Rtn3-202ENSMUST00000065304 Foxc1Q61572 553 aa9.09□□□□□ -0.95
Rtn3-202ENSMUST00000065304 4930415O20RikQ8CDT5 131 aa9.09□□□□□ -0.95
Rtn3-202ENSMUST00000065304 GlrxQ9QUH0 107 aa9.09□□□□□ -0.95
Rtn3-202ENSMUST00000065304 Trav4d-3A0A075B625 110 aa9.08□□□□□ -0.96
Rtn3-202ENSMUST00000065304 Ighv1-31A0A0A6YWK5 117 aa9.08□□□□□ -0.96
Rtn3-202ENSMUST00000065304 Ighv1-36A0A0A6YXT2 117 aa9.08□□□□□ -0.96
Rtn3-202ENSMUST00000065304 Ighv1-62-2A0A0A6YXZ4 119 aa9.08□□□□□ -0.96
Rtn3-202ENSMUST00000065304 Gm20219A0A1B0GRQ3 87 aa9.08□□□□□ -0.96
Rtn3-202ENSMUST00000065304 P01739 132 aa9.08□□□□□ -0.96
Rtn3-202ENSMUST00000065304 P01786 117 aa9.08□□□□□ -0.96
Rtn3-202ENSMUST00000065304 Acyp1P56376 99 aa9.08□□□□□ -0.96
Rtn3-202ENSMUST00000065304 EpopQ7TNS8 369 aa9.08□□□□□ -0.96
Rtn3-202ENSMUST00000065304 Tnrc6cQ3UHC0 1690 aaKnown RBP9.08□□□□□ -0.96
Rtn3-202ENSMUST00000065304 Gm20499D3Z4G5 72 aa9.08□□□□□ -0.96
Rtn3-202ENSMUST00000065304 Hrct1Q9D6B9 109 aa9.08□□□□□ -0.96
Rtn3-202ENSMUST00000065304 Col6a4A2AX52 2309 aa9.08□□□□□ -0.96
Rtn3-202ENSMUST00000065304 Spink4O35679 86 aa9.08□□□□□ -0.96
Rtn3-202ENSMUST00000065304 Csrp2P97314 193 aaKnown RBP9.08□□□□□ -0.96
Rtn3-202ENSMUST00000065304 Gm815Q3UWS2 115 aa9.08□□□□□ -0.96
Rtn3-202ENSMUST00000065304 COA4Q8BT51 87 aa9.08□□□□□ -0.96
Rtn3-202ENSMUST00000065304 PikfyveQ9Z1T6 2097 aa9.08□□□□□ -0.96
Rtn3-202ENSMUST00000065304 Nhsl1Q8CAF4 1587 aa9.08□□□□□ -0.96
Rtn3-202ENSMUST00000065304 Ighv5-9-1A0A0A6YVS4 126 aa9.08□□□□□ -0.96
Rtn3-202ENSMUST00000065304 Igkv6-32A0A140T8N9 115 aa9.08□□□□□ -0.96
Rtn3-202ENSMUST00000065304 Cox17P56394 63 aa9.08□□□□□ -0.96
Rtn3-202ENSMUST00000065304 Foxf1Q61080 378 aa9.08□□□□□ -0.96
Rtn3-202ENSMUST00000065304 Tmem14cQ9CQN6 114 aa9.08□□□□□ -0.96
Rtn3-202ENSMUST00000065304 SktA2AQ25 1946 aaKnown RBP9.08□□□□□ -0.96
Rtn3-202ENSMUST00000065304 Notch3Q61982 2318 aa9.07□□□□□ -0.96
Rtn3-202ENSMUST00000065304 Greb1lB9EJV3 1913 aa9.07□□□□□ -0.96
Rtn3-202ENSMUST00000065304 Cxcl13O55038 109 aa9.07□□□□□ -0.96
Rtn3-202ENSMUST00000065304 Ndufb1P0DN34 57 aa9.07□□□□□ -0.96
Rtn3-202ENSMUST00000065304 TriobpQ99KW3 2014 aa9.07□□□□□ -0.96
Rtn3-202ENSMUST00000065304 Gm9513B3GLJ6 99 aa9.07□□□□□ -0.96
Rtn3-202ENSMUST00000065304 Pax9P47242 342 aa9.07□□□□□ -0.96
Rtn3-202ENSMUST00000065304 Itgbl1Q8VDV0 494 aa9.07□□□□□ -0.96
Rtn3-202ENSMUST00000065304 Klk11Q9QYN3 276 aa9.07□□□□□ -0.96
Rtn3-202ENSMUST00000065304 Gm19345G3UYD9 124 aa9.06□□□□□ -0.96
Rtn3-202ENSMUST00000065304 Lst1O08843 95 aa9.06□□□□□ -0.96
Rtn3-202ENSMUST00000065304 Trav6n-6A0A075B6B2 114 aa9.06□□□□□ -0.96
Rtn3-202ENSMUST00000065304 6430628N08RikA0A0U1RQ45 177 aa9.06□□□□□ -0.96
Rtn3-202ENSMUST00000065304 Igkv1-122A0A140T8M9 119 aa9.06□□□□□ -0.96
Rtn3-202ENSMUST00000065304 Gm12830F6XVH0 157 aa9.06□□□□□ -0.96
Rtn3-202ENSMUST00000065304 Ndufc1Q9CQY9 76 aa9.06□□□□□ -0.96
Rtn3-202ENSMUST00000065304 Ighv8-2A0A0A6YW58 119 aa9.06□□□□□ -0.96
Rtn3-202ENSMUST00000065304 Pate2Q3UW31 111 aa9.06□□□□□ -0.96
Rtn3-202ENSMUST00000065304 Pnrc2Q9CR73 140 aa9.06□□□□□ -0.96
Rtn3-202ENSMUST00000065304 Gm10306Q9CUK2 115 aa9.06□□□□□ -0.96
Rtn3-202ENSMUST00000065304 Ly6aP05533 134 aa9.06□□□□□ -0.96
Rtn3-202ENSMUST00000065304 Tmem254aP0DN89 123 aa9.06□□□□□ -0.96
Rtn3-202ENSMUST00000065304 Tmem254bP0DN90 123 aa9.06□□□□□ -0.96
Rtn3-202ENSMUST00000065304 Tmem254cP0DN91 123 aa9.06□□□□□ -0.96
Rtn3-202ENSMUST00000065304 Rita1Q9D1H0 253 aa9.06□□□□□ -0.96
Rtn3-202ENSMUST00000065304 Nup214Q80U93 2085 aa9.05□□□□□ -0.96
Rtn3-202ENSMUST00000065304 Igkv4-86A0A0G2JGE7 114 aa9.05□□□□□ -0.96
Rtn3-202ENSMUST00000065304 Ndufa11Q9D8B4 141 aa9.05□□□□□ -0.96
Rtn3-202ENSMUST00000065304 Reg4Q9D8G5 157 aa9.05□□□□□ -0.96
Rtn3-202ENSMUST00000065304 Ang5Q5GAN1 145 aa9.05□□□□□ -0.96
Rtn3-202ENSMUST00000065304 Olfr313Q5NC55 308 aa9.05□□□□□ -0.96
Rtn3-202ENSMUST00000065304 Prr3Q811B5 190 aaKnown RBP9.05□□□□□ -0.96
Rtn3-202ENSMUST00000065304 Stpg1Q9D2F5 341 aa9.05□□□□□ -0.96
Rtn3-202ENSMUST00000065304 Frem3Q5H8B9 2123 aa9.05□□□□□ -0.96
Rtn3-202ENSMUST00000065304 Adamtsl3G3UXC7 1706 aa9.05□□□□□ -0.96
Rtn3-202ENSMUST00000065304 Clec4b2Q67DU8 208 aa9.05□□□□□ -0.96
Rtn3-202ENSMUST00000065304 Gm9881Q8BR56 211 aa9.05□□□□□ -0.96
Rtn3-202ENSMUST00000065304 Gm10251J3QPM5 127 aa9.04□□□□□ -0.96
Rtn3-202ENSMUST00000065304 P06330 118 aa9.04□□□□□ -0.96
Rtn3-202ENSMUST00000065304 Gm2916Q9D9B9 127 aa9.04□□□□□ -0.96
Rtn3-202ENSMUST00000065304 Smr2O09133 150 aa9.04□□□□□ -0.96
Rtn3-202ENSMUST00000065304 Foxf2O54743 446 aa9.04□□□□□ -0.96
Rtn3-202ENSMUST00000065304 Vpreb1P13372 142 aa9.04□□□□□ -0.96
Rtn3-202ENSMUST00000065304 P18533 117 aa9.04□□□□□ -0.96
Rtn3-202ENSMUST00000065304 Asphd1Q2TA57 360 aa9.04□□□□□ -0.96
Rtn3-202ENSMUST00000065304 Gm4861Q8C5A4 106 aa9.04□□□□□ -0.96
Rtn3-202ENSMUST00000065304 OtosQ8R448 89 aa9.04□□□□□ -0.96
Rtn3-202ENSMUST00000065304 Atp6v0e1Q9CQD8 81 aa9.04□□□□□ -0.96
Rtn3-202ENSMUST00000065304 Zcchc24B2RVL6 241 aaKnown RBP9.04□□□□□ -0.96
Rtn3-202ENSMUST00000065304 RtbdnQ8QZY4 247 aa9.04□□□□□ -0.96
Rtn3-202ENSMUST00000065304 Tmem213Q08EA8 116 aa9.04□□□□□ -0.96
Rtn3-202ENSMUST00000065304 Ormdl1Q921I0 153 aa9.04□□□□□ -0.96
Rtn3-202ENSMUST00000065304 4930447F04RikA2AFR2 126 aa9.03□□□□□ -0.96
Rtn3-202ENSMUST00000065304 GfyJ3KML8 504 aa9.03□□□□□ -0.96
Rtn3-202ENSMUST00000065304 Defb26Q30KN7 186 aa9.03□□□□□ -0.96
Rtn3-202ENSMUST00000065304 Zc2hc1bQ9D534 172 aa9.03□□□□□ -0.96
Rtn3-202ENSMUST00000065304 Trav11A0A0B4J1J9 114 aa9.03□□□□□ -0.96
Rtn3-202ENSMUST00000065304 Igkv3-10A0A0G2JGN0 119 aa9.03□□□□□ -0.96
Rtn3-202ENSMUST00000065304 Gm15294V9GXA7 121 aa9.03□□□□□ -0.96
Rtn3-202ENSMUST00000065304 Bub3Q9WVA3 326 aa9.03□□□□□ -0.96
Rtn3-202ENSMUST00000065304 Gm13090A2A899 111 aa9.03□□□□□ -0.96
Rtn3-202ENSMUST00000065304 B9d2Q3UK10 175 aa9.03□□□□□ -0.96
Rtn3-202ENSMUST00000065304 Zfp11P10751 647 aa9.02□□□□□ -0.97
Rtn3-202ENSMUST00000065304 H2al1mQ9DAD9 105 aa9.02□□□□□ -0.97
Rtn3-202ENSMUST00000065304 Ighv1-69A0A0G2JFS5 117 aa9.02□□□□□ -0.97
Rtn3-202ENSMUST00000065304 9530003J23RikQ8BM26 151 aa9.02□□□□□ -0.97
Rtn3-202ENSMUST00000065304 Ube2aQ9Z255 152 aa9.02□□□□□ -0.97
Rtn3-202ENSMUST00000065304 Nup188Q6ZQH8 1759 aa9.02□□□□□ -0.97
Retrieved 100 of 22,080 RNA–protein pairs in 104 ms