RNA–Protein interactions for RNA: ENSMUST00000034776.12

Cln6-201, Transcript of Ceroid-lipofuscinosis, neuronal 6, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Cln6, Length 2,142 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cln6-201ENSMUST00000034776 Ang3P97802 145 aa17.48■□□□□ 0.39
Cln6-201ENSMUST00000034776 Sorl1O88307 2215 aaKnown RBP17.47■□□□□ 0.39
Cln6-201ENSMUST00000034776 P01793 123 aa17.47■□□□□ 0.39
Cln6-201ENSMUST00000034776 Q4KKZ1 196 aa17.47■□□□□ 0.39
Cln6-201ENSMUST00000034776 Foxc2Q61850 494 aa17.47■□□□□ 0.39
Cln6-201ENSMUST00000034776 Tctex1d4Q8CDY7 219 aa17.47■□□□□ 0.39
Cln6-201ENSMUST00000034776 Nrn1Q8CFV4 142 aa17.47■□□□□ 0.39
Cln6-201ENSMUST00000034776 Olfr1199Q8VF94 310 aa17.47■□□□□ 0.39
Cln6-201ENSMUST00000034776 Vmn1r119E9Q4H3 307 aa17.47■□□□□ 0.39
Cln6-201ENSMUST00000034776 Znf664Q4VA44 261 aa17.47■□□□□ 0.39
Cln6-201ENSMUST00000034776 Fbxl7Q5BJ29 491 aa17.47■□□□□ 0.39
Cln6-201ENSMUST00000034776 Tnfsf15Q5UBV8 252 aa17.47■□□□□ 0.39
Cln6-201ENSMUST00000034776 Cdpf1Q8R3A2 119 aa17.47■□□□□ 0.39
Cln6-201ENSMUST00000034776 Ighv1-82A0A0G2JEU7 117 aa17.46■□□□□ 0.39
Cln6-201ENSMUST00000034776 Fhl1P97447 280 aaKnown RBP17.46■□□□□ 0.39
Cln6-201ENSMUST00000034776 Spink10Q8CAC8 162 aa17.46■□□□□ 0.39
Cln6-201ENSMUST00000034776 Igkv4-70A0A0B4J1I5 116 aa17.45■□□□□ 0.38
Cln6-201ENSMUST00000034776 Psmb11Q8BG41 302 aa17.45■□□□□ 0.38
Cln6-201ENSMUST00000034776 Igkv20-101-2A0A0G2JDU3 113 aa17.45■□□□□ 0.38
Cln6-201ENSMUST00000034776 Fndc10A2A9Q0 223 aa17.45■□□□□ 0.38
Cln6-201ENSMUST00000034776 P01812 117 aa17.45■□□□□ 0.38
Cln6-201ENSMUST00000034776 IqcjQ8BPW0 110 aa17.45■□□□□ 0.38
Cln6-201ENSMUST00000034776 Olfr365Q8VFT2 312 aa17.45■□□□□ 0.38
Cln6-201ENSMUST00000034776 Krtap26-1Q9D7N2 215 aa17.45■□□□□ 0.38
Cln6-201ENSMUST00000034776 Bex1Q9R224 128 aa17.45■□□□□ 0.38
Cln6-201ENSMUST00000034776 Vmn1r1E9PVR6 306 aa17.44■□□□□ 0.38
Cln6-201ENSMUST00000034776 MsmbO08540 113 aa17.44■□□□□ 0.38
Cln6-201ENSMUST00000034776 SeboxP70368 190 aa17.44■□□□□ 0.38
Cln6-201ENSMUST00000034776 Tmem88bQ3TYP4 173 aa17.44■□□□□ 0.38
Cln6-201ENSMUST00000034776 Vsig8Q6P3A4 417 aa17.44■□□□□ 0.38
Cln6-201ENSMUST00000034776 Tmem262D3Z338 116 aa17.44■□□□□ 0.38
Cln6-201ENSMUST00000034776 Fam241bQ9D882 120 aa17.44■□□□□ 0.38
Cln6-201ENSMUST00000034776 Pla2g2eQ9QUL3 142 aa17.44■□□□□ 0.38
Cln6-201ENSMUST00000034776 Ube2l6Q9QZU9 153 aa17.44■□□□□ 0.38
Cln6-201ENSMUST00000034776 Hivep2Q3UHF7 2430 aa17.43■□□□□ 0.38
Cln6-201ENSMUST00000034776 Gm5089A1L3C8 106 aa17.43■□□□□ 0.38
Cln6-201ENSMUST00000034776 Ang5Q5GAN1 145 aa17.43■□□□□ 0.38
Cln6-201ENSMUST00000034776 SnrpcQ62241 159 aa17.43■□□□□ 0.38
Cln6-201ENSMUST00000034776 Hspe1Q64433 102 aaKnown RBP17.43■□□□□ 0.38
Cln6-201ENSMUST00000034776 Olfr1431Q8VF59 312 aa17.43■□□□□ 0.38
Cln6-201ENSMUST00000034776 Gtsf1lQ9CWD0 151 aa17.43■□□□□ 0.38
Cln6-201ENSMUST00000034776 Npc2Q9Z0J0 149 aa17.43■□□□□ 0.38
Cln6-201ENSMUST00000034776 Myo9aQ8C170 2542 aa17.43■□□□□ 0.38
Cln6-201ENSMUST00000034776 TrrapQ80YV3 2565 aaKnown RBP17.42■□□□□ 0.38
Cln6-201ENSMUST00000034776 Igkv4-69A0A0B4J1I6 116 aa17.42■□□□□ 0.38
Cln6-201ENSMUST00000034776 Ighv1-62-3P01754 117 aa17.42■□□□□ 0.38
Cln6-201ENSMUST00000034776 Vmn1r202Q8R259 302 aa17.42■□□□□ 0.38
Cln6-201ENSMUST00000034776 LalbaP29752 143 aa17.42■□□□□ 0.38
Cln6-201ENSMUST00000034776 Rab4aP56371 218 aa17.42■□□□□ 0.38
Cln6-201ENSMUST00000034776 Ndufa4l2Q4FZG9 87 aa17.42■□□□□ 0.38
Cln6-201ENSMUST00000034776 Olfr975Q8VG91 310 aa17.42■□□□□ 0.38
Cln6-201ENSMUST00000034776 Q9D7E4 109 aa17.42■□□□□ 0.38
Cln6-201ENSMUST00000034776 Ighv1-9A0A0A6YW37 117 aa17.41■□□□□ 0.38
Cln6-201ENSMUST00000034776 Olfr1245A0A1L1SQJ6 307 aa17.41■□□□□ 0.38
Cln6-201ENSMUST00000034776 Gm94Q3V2D2 93 aa17.41■□□□□ 0.38
Cln6-201ENSMUST00000034776 CnfnQ6PCW6 111 aa17.41■□□□□ 0.38
Cln6-201ENSMUST00000034776 RnasekQ8K3C0 98 aa17.41■□□□□ 0.38
Cln6-201ENSMUST00000034776 Rpl11Q9CXW4 178 aaKnown RBP17.41■□□□□ 0.38
Cln6-201ENSMUST00000034776 Plpp2Q9DAX2 276 aa17.41■□□□□ 0.38
Cln6-201ENSMUST00000034776 Tmem177Q8BPE4 311 aa17.41■□□□□ 0.38
Cln6-201ENSMUST00000034776 Leprotl1Q9CQ74 131 aa17.41■□□□□ 0.38
Cln6-201ENSMUST00000034776 Mrpl53Q9D1H8 118 aaKnown RBP17.41■□□□□ 0.38
Cln6-201ENSMUST00000034776 7420426K07RikQ3UX66 186 aa17.4■□□□□ 0.38
Cln6-201ENSMUST00000034776 Tnfsf18Q7TS55 173 aa17.4■□□□□ 0.38
Cln6-201ENSMUST00000034776 Spink2Q8BMY7 86 aa17.4■□□□□ 0.38
Cln6-201ENSMUST00000034776 Slc31a2Q9CPU9 143 aa17.4■□□□□ 0.38
Cln6-201ENSMUST00000034776 Borcs7Q9CRC6 105 aa17.4■□□□□ 0.38
Cln6-201ENSMUST00000034776 Gcn1E9PVA8 2671 aaKnown RBP17.4■□□□□ 0.38
Cln6-201ENSMUST00000034776 TroQ6DIC6 2087 aa17.39■□□□□ 0.38
Cln6-201ENSMUST00000034776 Ighv1-23A0A0A6YVW3 117 aa17.39■□□□□ 0.38
Cln6-201ENSMUST00000034776 Tnfrsf9P20334 256 aa17.39■□□□□ 0.38
Cln6-201ENSMUST00000034776 Ufc1Q9CR09 167 aa17.39■□□□□ 0.38
Cln6-201ENSMUST00000034776 RhohQ9D3G9 191 aa17.39■□□□□ 0.38
Cln6-201ENSMUST00000034776 Ighv1-52A0A0A6YXC3 117 aa17.39■□□□□ 0.37
Cln6-201ENSMUST00000034776 Tcf21O35437 179 aa17.39■□□□□ 0.37
Cln6-201ENSMUST00000034776 Tmem241Q3UME2 297 aa17.39■□□□□ 0.37
Cln6-201ENSMUST00000034776 3110018I06RikQ9CXS0 120 aa17.39■□□□□ 0.37
Cln6-201ENSMUST00000034776 Spata25Q9DA57 226 aa17.39■□□□□ 0.37
Cln6-201ENSMUST00000034776 Trav19A0A0B4J1K4 119 aa17.38■□□□□ 0.37
Cln6-201ENSMUST00000034776 Gm10553J3QPF1 123 aa17.38■□□□□ 0.37
Cln6-201ENSMUST00000034776 Tmem208Q9CR96 173 aa17.38■□□□□ 0.37
Cln6-201ENSMUST00000034776 P01739 132 aa17.38■□□□□ 0.37
Cln6-201ENSMUST00000034776 Ube2e2Q91W82 201 aa17.38■□□□□ 0.37
Cln6-201ENSMUST00000034776 Cml3Q9JIY8 226 aa17.38■□□□□ 0.37
Cln6-201ENSMUST00000034776 BC067074F6RXI4 2391 aa17.37■□□□□ 0.37
Cln6-201ENSMUST00000034776 Ighv14-1A0A075B5R4 117 aa17.37■□□□□ 0.37
Cln6-201ENSMUST00000034776 1500009C09RikD3YYW9 81 aa17.37■□□□□ 0.37
Cln6-201ENSMUST00000034776 Gm9376G3UW68 176 aa17.37■□□□□ 0.37
Cln6-201ENSMUST00000034776 Ormdl3Q9CPZ6 153 aa17.37■□□□□ 0.37
Cln6-201ENSMUST00000034776 Nit2Q9JHW2 276 aa17.37■□□□□ 0.37
Cln6-201ENSMUST00000034776 P01750 117 aa17.36■□□□□ 0.37
Cln6-201ENSMUST00000034776 Olfr1437Q7TQR7 312 aa17.36■□□□□ 0.37
Cln6-201ENSMUST00000034776 Muc4Q8JZM8 3443 aa17.36■□□□□ 0.37
Cln6-201ENSMUST00000034776 NpbQ8K4P1 119 aa17.36■□□□□ 0.37
Cln6-201ENSMUST00000034776 Olfr1195Q8VG21 308 aa17.36■□□□□ 0.37
Cln6-201ENSMUST00000034776 Fam103a1Q9CQY2 119 aaKnown RBP17.36■□□□□ 0.37
Cln6-201ENSMUST00000034776 1810011H11RikE9PVZ2 95 aa17.35■□□□□ 0.37
Cln6-201ENSMUST00000034776 Ighv1-64A0A075B5X3 117 aa17.35■□□□□ 0.37
Cln6-201ENSMUST00000034776 Wfdc15aQ8BH89 80 aa17.35■□□□□ 0.37
Cln6-201ENSMUST00000034776 Olfr1012Q8VFJ7 311 aa17.35■□□□□ 0.37
Retrieved 100 of 22,080 RNA–protein pairs in 104.4 ms