RNA–Protein interactions for RNA: ENSMUST00000002043.9

Ccdc47-201, Transcript of Coiled-coil domain-containing protein 47, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc47, Length 5,193 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc47-201ENSMUST00000002043 Gm12830F6XVH0 157 aa7.36□□□□□ -1.23
Ccdc47-201ENSMUST00000002043 P01786 117 aa7.36□□□□□ -1.23
Ccdc47-201ENSMUST00000002043 P18528 98 aa7.36□□□□□ -1.23
Ccdc47-201ENSMUST00000002043 Ccl6P27784 116 aa7.35□□□□□ -1.23
Ccdc47-201ENSMUST00000002043 Lyrm9Q3UN90 78 aa7.35□□□□□ -1.23
Ccdc47-201ENSMUST00000002043 Cox11Q6P8I6 275 aa7.35□□□□□ -1.23
Ccdc47-201ENSMUST00000002043 Rs1Q9Z1L4 224 aa7.35□□□□□ -1.23
Ccdc47-201ENSMUST00000002043 Pkd1l3Q2EG98 2201 aa7.35□□□□□ -1.23
Ccdc47-201ENSMUST00000002043 Ighv1-55A0A075B5W6 117 aa7.35□□□□□ -1.23
Ccdc47-201ENSMUST00000002043 Gata3P23772 443 aa7.35□□□□□ -1.23
Ccdc47-201ENSMUST00000002043 Ighv3-4A0A0A6YXF1 117 aa7.35□□□□□ -1.23
Ccdc47-201ENSMUST00000002043 Igkv8-34A0A0G2JDU0 121 aa7.35□□□□□ -1.23
Ccdc47-201ENSMUST00000002043 Gm26727M0QWT1 121 aa7.35□□□□□ -1.23
Ccdc47-201ENSMUST00000002043 Dad1P61804 113 aa7.35□□□□□ -1.23
Ccdc47-201ENSMUST00000002043 Rnf183Q8QZS5 190 aa7.35□□□□□ -1.23
Ccdc47-201ENSMUST00000002043 Tomm6Q9CQN3 74 aa7.35□□□□□ -1.23
Ccdc47-201ENSMUST00000002043 Scn10aQ6QIY3 1958 aa7.35□□□□□ -1.23
Ccdc47-201ENSMUST00000002043 Prpf8Q99PV0 2335 aaKnown RBP7.35□□□□□ -1.23
Ccdc47-201ENSMUST00000002043 Gm37388A0A0A6YY46 143 aa7.35□□□□□ -1.23
Ccdc47-201ENSMUST00000002043 PolP10400 120 aa7.35□□□□□ -1.23
Ccdc47-201ENSMUST00000002043 BB014433Q8C5R5 389 aa7.35□□□□□ -1.23
Ccdc47-201ENSMUST00000002043 Fam216aQ9DB54 251 aa7.35□□□□□ -1.23
Ccdc47-201ENSMUST00000002043 Dock9Q8BIK4 2055 aa7.35□□□□□ -1.23
Ccdc47-201ENSMUST00000002043 Atad5Q4QY64 1826 aa7.35□□□□□ -1.23
Ccdc47-201ENSMUST00000002043 Myo16Q5DU14 1919 aa7.34□□□□□ -1.23
Ccdc47-201ENSMUST00000002043 Dock1Q8BUR4 1865 aa7.34□□□□□ -1.23
Ccdc47-201ENSMUST00000002043 Trav4d-3A0A075B625 110 aa7.34□□□□□ -1.23
Ccdc47-201ENSMUST00000002043 GfyJ3KML8 504 aa7.34□□□□□ -1.23
Ccdc47-201ENSMUST00000002043 Gm2174F6ZVF2 133 aa7.34□□□□□ -1.23
Ccdc47-201ENSMUST00000002043 Lynx1P0DP60 116 aa7.34□□□□□ -1.23
Ccdc47-201ENSMUST00000002043 Gm9936Q8C864 160 aa7.34□□□□□ -1.23
Ccdc47-201ENSMUST00000002043 NynrinQ5DTZ0 1840 aa7.34□□□□□ -1.23
Ccdc47-201ENSMUST00000002043 Igkv4-59A0A0B4J1I8 117 aa7.34□□□□□ -1.23
Ccdc47-201ENSMUST00000002043 4930447F04RikA2AFR2 126 aa7.34□□□□□ -1.23
Ccdc47-201ENSMUST00000002043 Ndufa1O35683 70 aa7.34□□□□□ -1.23
Ccdc47-201ENSMUST00000002043 Trav3-4A0A075B654 114 aa7.34□□□□□ -1.23
Ccdc47-201ENSMUST00000002043 Igkv4-68A0A0B4J1I7 117 aa7.34□□□□□ -1.23
Ccdc47-201ENSMUST00000002043 Sigmar1O55242 223 aa7.34□□□□□ -1.23
Ccdc47-201ENSMUST00000002043 P01896 185 aa7.34□□□□□ -1.23
Ccdc47-201ENSMUST00000002043 Ighv3-6P18531 116 aa7.34□□□□□ -1.23
Ccdc47-201ENSMUST00000002043 Ndufs7Q9DC70 224 aa7.34□□□□□ -1.23
Ccdc47-201ENSMUST00000002043 Atg2bQ80XK6 2075 aa7.34□□□□□ -1.24
Ccdc47-201ENSMUST00000002043 Gm19410A0A140LJC7 2098 aa7.33□□□□□ -1.24
Ccdc47-201ENSMUST00000002043 Gm28778A0A087WSK7 233 aa7.33□□□□□ -1.24
Ccdc47-201ENSMUST00000002043 Sdhaf1Q3U276 118 aa7.33□□□□□ -1.24
Ccdc47-201ENSMUST00000002043 Ighv5-8A0A075B676 92 aa7.33□□□□□ -1.24
Ccdc47-201ENSMUST00000002043 Trav6n-6A0A075B6B2 114 aa7.33□□□□□ -1.24
Ccdc47-201ENSMUST00000002043 Gm12169F2Z474 250 aa7.33□□□□□ -1.24
Ccdc47-201ENSMUST00000002043 P01738 130 aa7.33□□□□□ -1.24
Ccdc47-201ENSMUST00000002043 Zfp646Q6NV66 1788 aa7.33□□□□□ -1.24
Ccdc47-201ENSMUST00000002043 Insl3O09107 122 aa7.33□□□□□ -1.24
Ccdc47-201ENSMUST00000002043 Mtatp8P03930 67 aa7.33□□□□□ -1.24
Ccdc47-201ENSMUST00000002043 IappP12968 93 aa7.33□□□□□ -1.24
Ccdc47-201ENSMUST00000002043 B230307C23RikQ8BLB2 64 aa7.33□□□□□ -1.24
Ccdc47-201ENSMUST00000002043 Fam216bQ8CC14 138 aa7.33□□□□□ -1.24
Ccdc47-201ENSMUST00000002043 ArtnQ9Z0L2 224 aa7.33□□□□□ -1.24
Ccdc47-201ENSMUST00000002043 Trav14-3A0A075B607 120 aa7.33□□□□□ -1.24
Ccdc47-201ENSMUST00000002043 Igkv6-15A0A140T8M5 115 aa7.33□□□□□ -1.24
Ccdc47-201ENSMUST00000002043 LoxP28301 411 aa7.33□□□□□ -1.24
Ccdc47-201ENSMUST00000002043 Oxld1Q9CR10 201 aa7.33□□□□□ -1.24
Ccdc47-201ENSMUST00000002043 Atp23Q9CWQ3 201 aa7.33□□□□□ -1.24
Ccdc47-201ENSMUST00000002043 Fstl3Q9EQC7 256 aa7.33□□□□□ -1.24
Ccdc47-201ENSMUST00000002043 Reg3dQ9QUS9 175 aa7.33□□□□□ -1.24
Ccdc47-201ENSMUST00000002043 Arfgef3Q3UGY8 2170 aa7.33□□□□□ -1.24
Ccdc47-201ENSMUST00000002043 Wisp1O54775 367 aa7.32□□□□□ -1.24
Ccdc47-201ENSMUST00000002043 PemtQ61907 199 aa7.32□□□□□ -1.24
Ccdc47-201ENSMUST00000002043 3110082J24RikF6Z6Z2 108 aa7.32□□□□□ -1.24
Ccdc47-201ENSMUST00000002043 Rpl35aO55142 110 aa7.32□□□□□ -1.24
Ccdc47-201ENSMUST00000002043 Foxs1Q61574 329 aa7.32□□□□□ -1.24
Ccdc47-201ENSMUST00000002043 Olfr312Q7TRZ9 308 aa7.32□□□□□ -1.24
Ccdc47-201ENSMUST00000002043 Q8C708 225 aa7.32□□□□□ -1.24
Ccdc47-201ENSMUST00000002043 Ube2e2Q91W82 201 aa7.32□□□□□ -1.24
Ccdc47-201ENSMUST00000002043 Trav12-3A0A075B648 115 aa7.32□□□□□ -1.24
Ccdc47-201ENSMUST00000002043 Igkv4-61A0A0G2JH00 117 aa7.32□□□□□ -1.24
Ccdc47-201ENSMUST00000002043 A930003A15RikQ3U552 87 aa7.32□□□□□ -1.24
Ccdc47-201ENSMUST00000002043 Znrf2Q71FD5 238 aa7.32□□□□□ -1.24
Ccdc47-201ENSMUST00000002043 Gm5105Q8C6Y9 112 aa7.32□□□□□ -1.24
Ccdc47-201ENSMUST00000002043 Gm44973A0A140LJJ1 189 aa7.31□□□□□ -1.24
Ccdc47-201ENSMUST00000002043 Brd3osA0A1B0GRB6 84 aa7.31□□□□□ -1.24
Ccdc47-201ENSMUST00000002043 Gm12253Q5NC48 229 aa7.31□□□□□ -1.24
Ccdc47-201ENSMUST00000002043 Ly6g5bQ8K1T4 194 aa7.31□□□□□ -1.24
Ccdc47-201ENSMUST00000002043 Igkv4-81A0A0G2JEY5 119 aa7.31□□□□□ -1.24
Ccdc47-201ENSMUST00000002043 Inafm1E9PV59 130 aa7.31□□□□□ -1.24
Ccdc47-201ENSMUST00000002043 P03980 138 aa7.31□□□□□ -1.24
Ccdc47-201ENSMUST00000002043 P04945 108 aa7.31□□□□□ -1.24
Ccdc47-201ENSMUST00000002043 Pi4kaE9Q3L2 2105 aa7.31□□□□□ -1.24
Ccdc47-201ENSMUST00000002043 Gm815Q3UWS2 115 aa7.31□□□□□ -1.24
Ccdc47-201ENSMUST00000002043 Ndufa3Q9CQ91 84 aa7.31□□□□□ -1.24
Ccdc47-201ENSMUST00000002043 Ly6g6dQ9Z1Q3 135 aa7.31□□□□□ -1.24
Ccdc47-201ENSMUST00000002043 Ighv1-64A0A075B5X3 117 aa7.31□□□□□ -1.24
Ccdc47-201ENSMUST00000002043 Cox7cP17665 63 aa7.31□□□□□ -1.24
Ccdc47-201ENSMUST00000002043 Fxyd7P59648 80 aa7.31□□□□□ -1.24
Ccdc47-201ENSMUST00000002043 Defb26Q30KN7 186 aa7.31□□□□□ -1.24
Ccdc47-201ENSMUST00000002043 Il22ra2Q80XF5 230 aa7.31□□□□□ -1.24
Ccdc47-201ENSMUST00000002043 Frem1Q684R7 2191 aa7.31□□□□□ -1.24
Ccdc47-201ENSMUST00000002043 Igkv8-16A0A0G2JDG9 121 aa7.31□□□□□ -1.24
Ccdc47-201ENSMUST00000002043 P01630 113 aa7.31□□□□□ -1.24
Ccdc47-201ENSMUST00000002043 NpsP0C0P8 89 aa7.31□□□□□ -1.24
Ccdc47-201ENSMUST00000002043 Trav9-1A0A075B601 112 aa7.3□□□□□ -1.24
Ccdc47-201ENSMUST00000002043 Gatd1Q8BFQ8 220 aa7.3□□□□□ -1.24
Retrieved 100 of 22,080 RNA–protein pairs in 31.7 ms