RNA–Protein interactions for RNA: ENST00000641927.1

PHGDH-230, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,678 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-230ENST00000641927 IGKV3D-7A0A0C4DH55 119 aa9.76□□□□□ -0.85
PHGDH-230ENST00000641927 IMUPQ9GZP8 106 aa9.75□□□□□ -0.85
PHGDH-230ENST00000641927 NDUFB1O75438 58 aa9.74□□□□□ -0.85
PHGDH-230ENST00000641927 CXCL6P80162 114 aa9.74□□□□□ -0.85
PHGDH-230ENST00000641927 A8MWP4 228 aa9.73□□□□□ -0.85
PHGDH-230ENST00000641927 DSCR10P59022 87 aa9.73□□□□□ -0.85
PHGDH-230ENST00000641927 ANAPC13Q9BS18 74 aa9.73□□□□□ -0.85
PHGDH-230ENST00000641927 IGHV6-1A0A0B4J1U7 121 aa9.71□□□□□ -0.85
PHGDH-230ENST00000641927 A0A1B0GVX0 72 aa9.7□□□□□ -0.86
PHGDH-230ENST00000641927 K7EQZ3 153 aa9.7□□□□□ -0.86
PHGDH-230ENST00000641927 Q8N9L7 120 aa9.7□□□□□ -0.86
PHGDH-230ENST00000641927 C9orf92A6NGG3 77 aa9.69□□□□□ -0.86
PHGDH-230ENST00000641927 PRR15Q8IV56 129 aa9.67□□□□□ -0.86
PHGDH-230ENST00000641927 HIST1H4AP62805 103 aaKnown RBP9.66□□□□□ -0.86
PHGDH-230ENST00000641927 LINC00313P59037 77 aa9.64□□□□□ -0.87
PHGDH-230ENST00000641927 KRTAP13-3Q3SY46 172 aa9.64□□□□□ -0.87
PHGDH-230ENST00000641927 TPRXLQ17RH7 258 aa9.62□□□□□ -0.87
PHGDH-230ENST00000641927 NOTCH2NLQ7Z3S9 236 aa9.62□□□□□ -0.87
PHGDH-230ENST00000641927 C8orf87E5RJ46 101 aa9.61□□□□□ -0.87
PHGDH-230ENST00000641927 A0A087WVE0 104 aa9.6□□□□□ -0.87
PHGDH-230ENST00000641927 C8orf17Q9NRJ1 99 aa9.6□□□□□ -0.87
PHGDH-230ENST00000641927 HMCN2Q8NDA2 5059 aa9.58□□□□□ -0.88
PHGDH-230ENST00000641927 FAM236AA0A1B0GUQ0 79 aa9.57□□□□□ -0.88
PHGDH-230ENST00000641927 FAM236BA0A1B0GV22 79 aa9.57□□□□□ -0.88
PHGDH-230ENST00000641927 LPAP08519 4548 aa9.57□□□□□ -0.88
PHGDH-230ENST00000641927 MMP24-AS1A0A0U1RRL7 71 aa9.55□□□□□ -0.88
PHGDH-230ENST00000641927 WFDC13Q8IUB5 93 aa9.55□□□□□ -0.88
PHGDH-230ENST00000641927 HCG22E2RYF7 251 aa9.53□□□□□ -0.88
PHGDH-230ENST00000641927 CCDC179H3BU77 68 aa9.53□□□□□ -0.88
PHGDH-230ENST00000641927 hDV103S1A0JD37 113 aa9.52□□□□□ -0.89
PHGDH-230ENST00000641927 XP32Q5T750 250 aa9.52□□□□□ -0.89
PHGDH-230ENST00000641927 CASC2Q6XLA1 102 aa9.52□□□□□ -0.89
PHGDH-230ENST00000641927 KRTAP16-1A8MUX0 517 aa9.51□□□□□ -0.89
PHGDH-230ENST00000641927 TMEM254Q8TBM7 123 aa9.48□□□□□ -0.89
PHGDH-230ENST00000641927 MRPL34Q9BQ48 92 aaKnown RBP9.48□□□□□ -0.89
PHGDH-230ENST00000641927 ATOX1O00244 68 aa9.46□□□□□ -0.89
PHGDH-230ENST00000641927 NDUFS5O43920 106 aa9.45□□□□□ -0.9
PHGDH-230ENST00000641927 C20orf166-AS1Q96NR2 134 aa9.44□□□□□ -0.9
PHGDH-230ENST00000641927 LRP2P98164 4655 aa9.44□□□□□ -0.9
PHGDH-230ENST00000641927 A8MUU9 505 aa9.42□□□□□ -0.9
PHGDH-230ENST00000641927 Q75L30 129 aa9.42□□□□□ -0.9
PHGDH-230ENST00000641927 RPL37P61927 97 aaKnown RBP9.42□□□□□ -0.9
PHGDH-230ENST00000641927 Q8N9P0 234 aaPredicted RBP9.42□□□□□ -0.9
PHGDH-230ENST00000641927 UQCRQO14949 82 aa9.39□□□□□ -0.91
PHGDH-230ENST00000641927 SMIM20Q8N5G0 67 aa9.37□□□□□ -0.91
PHGDH-230ENST00000641927 ATP11AUNQ6ZP68 121 aa9.36□□□□□ -0.91
PHGDH-230ENST00000641927 COX7CP15954 63 aa9.35□□□□□ -0.91
PHGDH-230ENST00000641927 SEC61BP60468 96 aaKnown RBP9.33□□□□□ -0.92
PHGDH-230ENST00000641927 SERP2Q8N6R1 65 aa9.33□□□□□ -0.92
PHGDH-230ENST00000641927 PCOTHQ58A44 107 aa9.32□□□□□ -0.92
PHGDH-230ENST00000641927 TRAV7A0A075B6U4 112 aa9.32□□□□□ -0.92
PHGDH-230ENST00000641927 OCR1Q9BZK8 76 aa9.3□□□□□ -0.92
PHGDH-230ENST00000641927 ZCCHC13Q8WW36 166 aaKnown RBP9.29□□□□□ -0.92
PHGDH-230ENST00000641927 TP53AIP1Q9HCN2 124 aa9.29□□□□□ -0.92
PHGDH-230ENST00000641927 Q5W150 140 aa9.23□□□□□ -0.93
PHGDH-230ENST00000641927 UBR4Q5T4S7 5183 aa9.23□□□□□ -0.93
PHGDH-230ENST00000641927 MUC17Q685J3 4493 aa9.2□□□□□ -0.94
PHGDH-230ENST00000641927 TRAV22A0A0B4J277 110 aa9.18□□□□□ -0.94
PHGDH-230ENST00000641927 C5orf47Q569G3 176 aa9.16□□□□□ -0.94
PHGDH-230ENST00000641927 H0Y9P7 68 aa9.14□□□□□ -0.95
PHGDH-230ENST00000641927 TMEM258P61165 79 aa9.14□□□□□ -0.95
PHGDH-230ENST00000641927 C20orf197Q8N268 126 aa9.14□□□□□ -0.95
PHGDH-230ENST00000641927 CYSTM1Q9H1C7 97 aa9.13□□□□□ -0.95
PHGDH-230ENST00000641927 IGKV2D-30A0A075B6S6 120 aa9.13□□□□□ -0.95
PHGDH-230ENST00000641927 IGKV2-30P06310 120 aa9.13□□□□□ -0.95
PHGDH-230ENST00000641927 SVIPQ8NHG7 77 aa9.12□□□□□ -0.95
PHGDH-230ENST00000641927 MP68P56378 58 aa9.11□□□□□ -0.95
PHGDH-230ENST00000641927 SPINK7P58062 85 aa9.11□□□□□ -0.95
PHGDH-230ENST00000641927 KRTAP4-1Q9BYQ7 146 aa9.11□□□□□ -0.95
PHGDH-230ENST00000641927 KLKP1Q107X0 134 aa9.1□□□□□ -0.95
PHGDH-230ENST00000641927 RNF213Q63HN8 5207 aa9.09□□□□□ -0.95
PHGDH-230ENST00000641927 A0A0U1RQV1 116 aa9.08□□□□□ -0.96
PHGDH-230ENST00000641927 RPS28P62857 69 aaKnown RBP9.08□□□□□ -0.96
PHGDH-230ENST00000641927 C7orf65Q6ZTY9 151 aa9.07□□□□□ -0.96
PHGDH-230ENST00000641927 LINC00208Q96KT6 92 aa9.07□□□□□ -0.96
PHGDH-230ENST00000641927 SNURFQ9Y675 71 aa9.07□□□□□ -0.96
PHGDH-230ENST00000641927 MUC2Q02817 5179 aa9.07□□□□□ -0.96
PHGDH-230ENST00000641927 H3BPC8 53 aa9.06□□□□□ -0.96
PHGDH-230ENST00000641927 C1orf64Q8NEQ6 169 aa9.05□□□□□ -0.96
PHGDH-230ENST00000641927 LOC101927531A0A1B0GV80 90 aa9.04□□□□□ -0.96
PHGDH-230ENST00000641927 CYP4F30PQ9H0H9 118 aa9□□□□□ -0.97
PHGDH-230ENST00000641927 NDUFC1O43677 76 aa8.99□□□□□ -0.97
PHGDH-230ENST00000641927 H7BZZ5 65 aa8.96□□□□□ -0.98
PHGDH-230ENST00000641927 HRES1P13985 223 aa8.96□□□□□ -0.98
PHGDH-230ENST00000641927 FAM236DA0A1B0GTK5 79 aa8.94□□□□□ -0.98
PHGDH-230ENST00000641927 FAM236CP0DP71 79 aa8.94□□□□□ -0.98
PHGDH-230ENST00000641927 RBM12B-AS1Q9P1G2 102 aa8.91□□□□□ -0.98
PHGDH-230ENST00000641927 C4orf26Q17RF5 130 aa8.9□□□□□ -0.98
PHGDH-230ENST00000641927 COX6B2Q6YFQ2 88 aa8.87□□□□□ -0.99
PHGDH-230ENST00000641927 SERP1Q9Y6X1 66 aa8.87□□□□□ -0.99
PHGDH-230ENST00000641927 MPLKIPQ8TAP9 179 aa8.86□□□□□ -0.99
PHGDH-230ENST00000641927 ATP5EP56381 51 aaPredicted RBP8.85□□□□□ -0.99
PHGDH-230ENST00000641927 SPANXA2-OT1Q8N9U9 137 aa8.78□□□□□ -1
PHGDH-230ENST00000641927 KRTAP19-2Q3LHN2 52 aa8.78□□□□□ -1
PHGDH-230ENST00000641927 FAT4Q6V0I7 4981 aa8.72□□□□□ -1.01
PHGDH-230ENST00000641927 LCE2CQ5TA81 110 aa8.72□□□□□ -1.01
PHGDH-230ENST00000641927 KRTAP3-1Q9BYR8 98 aa8.72□□□□□ -1.01
PHGDH-230ENST00000641927 SMIM26A0A096LP01 95 aa8.71□□□□□ -1.02
PHGDH-230ENST00000641927 H1FX-AS1Q4G0G2 97 aa8.7□□□□□ -1.02
PHGDH-230ENST00000641927 A8MUN3 132 aa8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms