RNA–Protein interactions for RNA: ENST00000641314.1

PHGDH-214, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,558 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-214ENST00000641314 NDUFB1O75438 58 aa9.93□□□□□ -0.82
PHGDH-214ENST00000641314 IMUPQ9GZP8 106 aa9.92□□□□□ -0.82
PHGDH-214ENST00000641314 PRR15Q8IV56 129 aa9.92□□□□□ -0.82
PHGDH-214ENST00000641314 IGHV6-1A0A0B4J1U7 121 aa9.9□□□□□ -0.82
PHGDH-214ENST00000641314 A0A1B0GVX0 72 aa9.9□□□□□ -0.82
PHGDH-214ENST00000641314 DMBT1Q9UGM3 2413 aaPredicted RBP9.89□□□□□ -0.83
PHGDH-214ENST00000641314 PCLOQ9Y6V0 5065 aa9.84□□□□□ -0.83
PHGDH-214ENST00000641314 WFDC13Q8IUB5 93 aa9.83□□□□□ -0.84
PHGDH-214ENST00000641314 C8orf17Q9NRJ1 99 aa9.83□□□□□ -0.84
PHGDH-214ENST00000641314 HCG22E2RYF7 251 aa9.82□□□□□ -0.84
PHGDH-214ENST00000641314 NOTCH2NLQ7Z3S9 236 aa9.82□□□□□ -0.84
PHGDH-214ENST00000641314 MMP24-AS1A0A0U1RRL7 71 aa9.81□□□□□ -0.84
PHGDH-214ENST00000641314 FAM236AA0A1B0GUQ0 79 aa9.81□□□□□ -0.84
PHGDH-214ENST00000641314 FAM236BA0A1B0GV22 79 aa9.81□□□□□ -0.84
PHGDH-214ENST00000641314 C8orf87E5RJ46 101 aa9.79□□□□□ -0.84
PHGDH-214ENST00000641314 CASC2Q6XLA1 102 aa9.79□□□□□ -0.84
PHGDH-214ENST00000641314 FP248Q71RG6 208 aaPredicted RBP9.79□□□□□ -0.84
PHGDH-214ENST00000641314 LINC00313P59037 77 aa9.78□□□□□ -0.84
PHGDH-214ENST00000641314 hDV103S1A0JD37 113 aa9.76□□□□□ -0.85
PHGDH-214ENST00000641314 PRR4Q16378 134 aa9.76□□□□□ -0.85
PHGDH-214ENST00000641314 IGLV7-46A0A075B6I9 117 aa9.75□□□□□ -0.85
PHGDH-214ENST00000641314 C9orf92A6NGG3 77 aa9.75□□□□□ -0.85
PHGDH-214ENST00000641314 SCGB1A1P11684 91 aa9.74□□□□□ -0.85
PHGDH-214ENST00000641314 PCP4P48539 62 aa9.71□□□□□ -0.85
PHGDH-214ENST00000641314 TMEM254Q8TBM7 123 aa9.71□□□□□ -0.85
PHGDH-214ENST00000641314 SVIPQ8NHG7 77 aa9.7□□□□□ -0.86
PHGDH-214ENST00000641314 MRPL34Q9BQ48 92 aaKnown RBP9.7□□□□□ -0.86
PHGDH-214ENST00000641314 KRTAP16-1A8MUX0 517 aa9.67□□□□□ -0.86
PHGDH-214ENST00000641314 ATOX1O00244 68 aa9.66□□□□□ -0.86
PHGDH-214ENST00000641314 NDUFS5O43920 106 aa9.66□□□□□ -0.86
PHGDH-214ENST00000641314 KRTAP13-3Q3SY46 172 aa9.63□□□□□ -0.87
PHGDH-214ENST00000641314 Q8N9P0 234 aaPredicted RBP9.59□□□□□ -0.87
PHGDH-214ENST00000641314 ANAPC13Q9BS18 74 aa9.59□□□□□ -0.87
PHGDH-214ENST00000641314 OCR1Q9BZK8 76 aa9.59□□□□□ -0.87
PHGDH-214ENST00000641314 SMIM20Q8N5G0 67 aa9.58□□□□□ -0.88
PHGDH-214ENST00000641314 TPRXLQ17RH7 258 aa9.57□□□□□ -0.88
PHGDH-214ENST00000641314 TRAV7A0A075B6U4 112 aa9.55□□□□□ -0.88
PHGDH-214ENST00000641314 XP32Q5T750 250 aa9.54□□□□□ -0.88
PHGDH-214ENST00000641314 TP53AIP1Q9HCN2 124 aa9.54□□□□□ -0.88
PHGDH-214ENST00000641314 C20orf166-AS1Q96NR2 134 aa9.54□□□□□ -0.88
PHGDH-214ENST00000641314 A8MUU9 505 aa9.53□□□□□ -0.88
PHGDH-214ENST00000641314 UQCRQO14949 82 aa9.53□□□□□ -0.88
PHGDH-214ENST00000641314 SERP2Q8N6R1 65 aa9.53□□□□□ -0.88
PHGDH-214ENST00000641314 HERC1Q15751 4861 aa9.51□□□□□ -0.89
PHGDH-214ENST00000641314 Q75L30 129 aa9.5□□□□□ -0.89
PHGDH-214ENST00000641314 COX7CP15954 63 aa9.46□□□□□ -0.89
PHGDH-214ENST00000641314 Q5W150 140 aa9.46□□□□□ -0.89
PHGDH-214ENST00000641314 LPAP08519 4548 aa9.46□□□□□ -0.9
PHGDH-214ENST00000641314 TRAV22A0A0B4J277 110 aa9.46□□□□□ -0.9
PHGDH-214ENST00000641314 H0Y9P7 68 aa9.46□□□□□ -0.9
PHGDH-214ENST00000641314 RPL37P61927 97 aaKnown RBP9.46□□□□□ -0.9
PHGDH-214ENST00000641314 C5orf47Q569G3 176 aa9.44□□□□□ -0.9
PHGDH-214ENST00000641314 ZCCHC13Q8WW36 166 aaKnown RBP9.44□□□□□ -0.9
PHGDH-214ENST00000641314 MP68P56378 58 aa9.42□□□□□ -0.9
PHGDH-214ENST00000641314 HMCN2Q8NDA2 5059 aa9.4□□□□□ -0.9
PHGDH-214ENST00000641314 ATP11AUNQ6ZP68 121 aa9.4□□□□□ -0.9
PHGDH-214ENST00000641314 C20orf197Q8N268 126 aa9.39□□□□□ -0.91
PHGDH-214ENST00000641314 CCDC179H3BU77 68 aa9.38□□□□□ -0.91
PHGDH-214ENST00000641314 LINC00208Q96KT6 92 aa9.37□□□□□ -0.91
PHGDH-214ENST00000641314 SNURFQ9Y675 71 aa9.35□□□□□ -0.91
PHGDH-214ENST00000641314 LRP2P98164 4655 aa9.35□□□□□ -0.91
PHGDH-214ENST00000641314 C1orf64Q8NEQ6 169 aa9.34□□□□□ -0.91
PHGDH-214ENST00000641314 A0A0U1RQV1 116 aa9.33□□□□□ -0.92
PHGDH-214ENST00000641314 H3BPC8 53 aa9.33□□□□□ -0.92
PHGDH-214ENST00000641314 PCOTHQ58A44 107 aa9.33□□□□□ -0.92
PHGDH-214ENST00000641314 IGKV2D-30A0A075B6S6 120 aa9.3□□□□□ -0.92
PHGDH-214ENST00000641314 LOC101927531A0A1B0GV80 90 aa9.3□□□□□ -0.92
PHGDH-214ENST00000641314 IGKV2-30P06310 120 aa9.3□□□□□ -0.92
PHGDH-214ENST00000641314 KLKP1Q107X0 134 aa9.28□□□□□ -0.92
PHGDH-214ENST00000641314 SEC61BP60468 96 aaKnown RBP9.27□□□□□ -0.93
PHGDH-214ENST00000641314 CYSTM1Q9H1C7 97 aa9.25□□□□□ -0.93
PHGDH-214ENST00000641314 C7orf65Q6ZTY9 151 aa9.24□□□□□ -0.93
PHGDH-214ENST00000641314 CYP4F30PQ9H0H9 118 aa9.24□□□□□ -0.93
PHGDH-214ENST00000641314 SPINK7P58062 85 aa9.22□□□□□ -0.93
PHGDH-214ENST00000641314 MUC17Q685J3 4493 aa9.16□□□□□ -0.94
PHGDH-214ENST00000641314 NDUFC1O43677 76 aa9.16□□□□□ -0.94
PHGDH-214ENST00000641314 H7BZZ5 65 aa9.14□□□□□ -0.95
PHGDH-214ENST00000641314 HRES1P13985 223 aa9.11□□□□□ -0.95
PHGDH-214ENST00000641314 KRTAP4-1Q9BYQ7 146 aa9.07□□□□□ -0.96
PHGDH-214ENST00000641314 C4orf26Q17RF5 130 aa9.06□□□□□ -0.96
PHGDH-214ENST00000641314 TMEM258P61165 79 aa9.01□□□□□ -0.97
PHGDH-214ENST00000641314 SPANXA2-OT1Q8N9U9 137 aa9.01□□□□□ -0.97
PHGDH-214ENST00000641314 FAM236DA0A1B0GTK5 79 aa8.98□□□□□ -0.97
PHGDH-214ENST00000641314 FAM236CP0DP71 79 aa8.98□□□□□ -0.97
PHGDH-214ENST00000641314 COX6B2Q6YFQ2 88 aa8.95□□□□□ -0.98
PHGDH-214ENST00000641314 RBM12B-AS1Q9P1G2 102 aa8.95□□□□□ -0.98
PHGDH-214ENST00000641314 UBR4Q5T4S7 5183 aa8.94□□□□□ -0.98
PHGDH-214ENST00000641314 ATP5EP56381 51 aaPredicted RBP8.93□□□□□ -0.98
PHGDH-214ENST00000641314 MPLKIPQ8TAP9 179 aa8.93□□□□□ -0.98
PHGDH-214ENST00000641314 DMAC1Q96GE9 116 aa8.91□□□□□ -0.98
PHGDH-214ENST00000641314 RNF213Q63HN8 5207 aa8.9□□□□□ -0.98
PHGDH-214ENST00000641314 KRTAP3-1Q9BYR8 98 aa8.9□□□□□ -0.99
PHGDH-214ENST00000641314 A8MUN3 132 aa8.86□□□□□ -0.99
PHGDH-214ENST00000641314 ACYP2P14621 99 aa8.85□□□□□ -0.99
PHGDH-214ENST00000641314 MUC2Q02817 5179 aa8.83□□□□□ -1
PHGDH-214ENST00000641314 H1FX-AS1Q4G0G2 97 aa8.79□□□□□ -1
PHGDH-214ENST00000641314 COA5Q86WW8 74 aa8.78□□□□□ -1
PHGDH-214ENST00000641314 KRTAP19-2Q3LHN2 52 aa8.76□□□□□ -1.01
PHGDH-214ENST00000641314 CHKB-CPT1BH3BT56 60 aa8.74□□□□□ -1.01
PHGDH-214ENST00000641314 SERP1Q9Y6X1 66 aa8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms