RNA–Protein interactions for RNA: ENST00000640900.1

SCARB2-225, Transcript of scavenger receptor class B member 2, humanhuman

TSL 2

Gene SCARB2, Length 531 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-225ENST00000640900 VPS25Q9BRG1 176 aa5.1□□□□□ -1.59
SCARB2-225ENST00000640900 LPAP08519 4548 aa5.09□□□□□ -1.59
SCARB2-225ENST00000640900 FAM240AA0A1B0GVK7 77 aa5.09□□□□□ -1.59
SCARB2-225ENST00000640900 RETNLBQ9BQ08 111 aa5.09□□□□□ -1.59
SCARB2-225ENST00000640900 KRTAP4-8A0A0G2JLE6 195 aa5.08□□□□□ -1.6
SCARB2-225ENST00000640900 LINC00846Q9NV44 126 aa5.08□□□□□ -1.6
SCARB2-225ENST00000640900 LRP2P98164 4655 aa5.07□□□□□ -1.6
SCARB2-225ENST00000640900 ACYP1P07311 99 aa5.06□□□□□ -1.6
SCARB2-225ENST00000640900 LCE1DQ5T752 114 aa5.06□□□□□ -1.6
SCARB2-225ENST00000640900 LCE4AQ5TA78 99 aa5.06□□□□□ -1.6
SCARB2-225ENST00000640900 IGLV7-46A0A075B6I9 117 aa5.05□□□□□ -1.6
SCARB2-225ENST00000640900 TPRXLQ17RH7 258 aa5.05□□□□□ -1.6
SCARB2-225ENST00000640900 Q6ZVQ6 151 aa5.05□□□□□ -1.6
SCARB2-225ENST00000640900 NREPQ16612 68 aa5.04□□□□□ -1.6
SCARB2-225ENST00000640900 KRTAP13-3Q3SY46 172 aa5.04□□□□□ -1.6
SCARB2-225ENST00000640900 J3KT08 172 aa5.03□□□□□ -1.6
SCARB2-225ENST00000640900 DSCR10P59022 87 aa5.02□□□□□ -1.61
SCARB2-225ENST00000640900 PRR4Q16378 134 aa5.02□□□□□ -1.61
SCARB2-225ENST00000640900 MUC17Q685J3 4493 aa5.02□□□□□ -1.61
SCARB2-225ENST00000640900 A8MWP4 228 aa5.01□□□□□ -1.61
SCARB2-225ENST00000640900 IGKV4-1P06312 121 aa5.01□□□□□ -1.61
SCARB2-225ENST00000640900 DEFB116Q30KQ4 102 aa5.01□□□□□ -1.61
SCARB2-225ENST00000640900 UBL5Q9BZL1 73 aa5.01□□□□□ -1.61
SCARB2-225ENST00000640900 KRTAP9-7A8MTY7 169 aa5□□□□□ -1.61
SCARB2-225ENST00000640900 J3QR89 54 aa5□□□□□ -1.61
SCARB2-225ENST00000640900 IGKV3D-7A0A0C4DH55 119 aa4.99□□□□□ -1.61
SCARB2-225ENST00000640900 SIGMAR1Q99720 223 aa4.99□□□□□ -1.61
SCARB2-225ENST00000640900 A0A1B0GVX0 72 aa4.98□□□□□ -1.61
SCARB2-225ENST00000640900 BPY2O14599 106 aa4.98□□□□□ -1.61
SCARB2-225ENST00000640900 CXCL6P80162 114 aa4.98□□□□□ -1.61
SCARB2-225ENST00000640900 PRR15Q8IV56 129 aa4.98□□□□□ -1.61
SCARB2-225ENST00000640900 KRTAP16-1A8MUX0 517 aa4.97□□□□□ -1.61
SCARB2-225ENST00000640900 NOTCH2NLQ7Z3S9 236 aa4.97□□□□□ -1.61
SCARB2-225ENST00000640900 KRTAP23-1A1A580 65 aa4.96□□□□□ -1.62
SCARB2-225ENST00000640900 K7ERU9 68 aa4.96□□□□□ -1.62
SCARB2-225ENST00000640900 LINC00643Q86TS7 51 aa4.96□□□□□ -1.62
SCARB2-225ENST00000640900 KRTAP3-1Q9BYR8 98 aa4.96□□□□□ -1.62
SCARB2-225ENST00000640900 C8orf87E5RJ46 101 aa4.95□□□□□ -1.62
SCARB2-225ENST00000640900 K7EQZ3 153 aa4.95□□□□□ -1.62
SCARB2-225ENST00000640900 ATP5EP2Q5VTU8 51 aa4.95□□□□□ -1.62
SCARB2-225ENST00000640900 NDUFB1O75438 58 aa4.94□□□□□ -1.62
SCARB2-225ENST00000640900 IGHV6-1A0A0B4J1U7 121 aa4.93□□□□□ -1.62
SCARB2-225ENST00000640900 C9orf92A6NGG3 77 aa4.93□□□□□ -1.62
SCARB2-225ENST00000640900 LINC00313P59037 77 aa4.93□□□□□ -1.62
SCARB2-225ENST00000640900 C20orf166-AS1Q96NR2 134 aa4.93□□□□□ -1.62
SCARB2-225ENST00000640900 C8orf17Q9NRJ1 99 aa4.93□□□□□ -1.62
SCARB2-225ENST00000640900 MMP24-AS1A0A0U1RRL7 71 aa4.92□□□□□ -1.62
SCARB2-225ENST00000640900 A8MUU9 505 aa4.92□□□□□ -1.62
SCARB2-225ENST00000640900 Q8N9L7 120 aa4.92□□□□□ -1.62
SCARB2-225ENST00000640900 Q75L30 129 aa4.91□□□□□ -1.62
SCARB2-225ENST00000640900 Q8N9P0 234 aaPredicted RBP4.9□□□□□ -1.63
SCARB2-225ENST00000640900 KRTAP4-7Q9BYR0 210 aa4.9□□□□□ -1.63
SCARB2-225ENST00000640900 RPL37P61927 97 aaKnown RBP4.89□□□□□ -1.63
SCARB2-225ENST00000640900 UBR4Q5T4S7 5183 aa4.89□□□□□ -1.63
SCARB2-225ENST00000640900 TMEM254Q8TBM7 123 aa4.88□□□□□ -1.63
SCARB2-225ENST00000640900 hDV103S1A0JD37 113 aa4.87□□□□□ -1.63
SCARB2-225ENST00000640900 HCG22E2RYF7 251 aa4.86□□□□□ -1.63
SCARB2-225ENST00000640900 MRPL34Q9BQ48 92 aaKnown RBP4.86□□□□□ -1.63
SCARB2-225ENST00000640900 IMUPQ9GZP8 106 aa4.85□□□□□ -1.63
SCARB2-225ENST00000640900 MT-ATP8P03928 68 aa4.84□□□□□ -1.63
SCARB2-225ENST00000640900 CASC2Q6XLA1 102 aa4.84□□□□□ -1.63
SCARB2-225ENST00000640900 RNF213Q63HN8 5207 aa4.84□□□□□ -1.64
SCARB2-225ENST00000640900 SEC61BP60468 96 aaKnown RBP4.83□□□□□ -1.64
SCARB2-225ENST00000640900 LCE5AQ5TCM9 118 aa4.83□□□□□ -1.64
SCARB2-225ENST00000640900 KRTAP4-9Q9BYQ8 210 aa4.83□□□□□ -1.64
SCARB2-225ENST00000640900 WFDC13Q8IUB5 93 aa4.82□□□□□ -1.64
SCARB2-225ENST00000640900 KRTAP9-3Q9BYQ3 159 aa4.82□□□□□ -1.64
SCARB2-225ENST00000640900 A0A087WVE0 104 aa4.81□□□□□ -1.64
SCARB2-225ENST00000640900 HIST1H4AP62805 103 aaKnown RBP4.81□□□□□ -1.64
SCARB2-225ENST00000640900 PCOTHQ58A44 107 aa4.81□□□□□ -1.64
SCARB2-225ENST00000640900 MUC2Q02817 5179 aa4.8□□□□□ -1.64
SCARB2-225ENST00000640900 KRTAP4-1Q9BYQ7 146 aa4.8□□□□□ -1.64
SCARB2-225ENST00000640900 ZCCHC13Q8WW36 166 aaKnown RBP4.79□□□□□ -1.64
SCARB2-225ENST00000640900 ATP11AUNQ6ZP68 121 aa4.78□□□□□ -1.64
SCARB2-225ENST00000640900 Q5W150 140 aa4.77□□□□□ -1.65
SCARB2-225ENST00000640900 TP53AIP1Q9HCN2 124 aa4.76□□□□□ -1.65
SCARB2-225ENST00000640900 OCR1Q9BZK8 76 aa4.75□□□□□ -1.65
SCARB2-225ENST00000640900 UQCRQO14949 82 aa4.72□□□□□ -1.65
SCARB2-225ENST00000640900 NDUFS5O43920 106 aa4.72□□□□□ -1.65
SCARB2-225ENST00000640900 MPLKIPQ8TAP9 179 aa4.71□□□□□ -1.66
SCARB2-225ENST00000640900 KRTAP19-2Q3LHN2 52 aa4.7□□□□□ -1.66
SCARB2-225ENST00000640900 KRTAP4-11Q9BYQ6 195 aa4.7□□□□□ -1.66
SCARB2-225ENST00000640900 FAM236AA0A1B0GUQ0 79 aa4.69□□□□□ -1.66
SCARB2-225ENST00000640900 FAM236BA0A1B0GV22 79 aa4.69□□□□□ -1.66
SCARB2-225ENST00000640900 SPINK7P58062 85 aa4.69□□□□□ -1.66
SCARB2-225ENST00000640900 FAT4Q6V0I7 4981 aa4.68□□□□□ -1.66
SCARB2-225ENST00000640900 FLGP20930 4061 aaPredicted RBP4.68□□□□□ -1.66
SCARB2-225ENST00000640900 HRES1P13985 223 aa4.68□□□□□ -1.66
SCARB2-225ENST00000640900 TRAV22A0A0B4J277 110 aa4.67□□□□□ -1.66
SCARB2-225ENST00000640900 IGKV2-30P06310 120 aa4.67□□□□□ -1.66
SCARB2-225ENST00000640900 SCGB1A1P11684 91 aa4.66□□□□□ -1.66
SCARB2-225ENST00000640900 SMIM20Q8N5G0 67 aa4.66□□□□□ -1.66
SCARB2-225ENST00000640900 TRAV7A0A075B6U4 112 aa4.65□□□□□ -1.67
SCARB2-225ENST00000640900 ATOX1O00244 68 aa4.65□□□□□ -1.67
SCARB2-225ENST00000640900 C5orf47Q569G3 176 aa4.65□□□□□ -1.67
SCARB2-225ENST00000640900 C7orf65Q6ZTY9 151 aa4.64□□□□□ -1.67
SCARB2-225ENST00000640900 CYP4F30PQ9H0H9 118 aa4.64□□□□□ -1.67
SCARB2-225ENST00000640900 H0Y9P7 68 aa4.63□□□□□ -1.67
SCARB2-225ENST00000640900 H3BPC8 53 aa4.63□□□□□ -1.67
SCARB2-225ENST00000640900 KRTAP4-2Q9BYR5 136 aa4.63□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms