RNA–Protein interactions for RNA: ENST00000640861.1

RAI1-207, Transcript of retinoic acid induced 1, humanhuman

TSL 5 BASIC

Gene RAI1, Length 5,172 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAI1-207ENST00000640861 CELSR3Q9NYQ7 3312 aa9.13□□□□□ -0.95
RAI1-207ENST00000640861 A8MUU9 505 aa9.11□□□□□ -0.95
RAI1-207ENST00000640861 TENM4Q6N022 2769 aa9.08□□□□□ -0.96
RAI1-207ENST00000640861 ADGRG4Q8IZF6 3080 aa9.07□□□□□ -0.96
RAI1-207ENST00000640861 FRYLO94915 3013 aa9.07□□□□□ -0.96
RAI1-207ENST00000640861 CELSR2Q9HCU4 2923 aa9.05□□□□□ -0.96
RAI1-207ENST00000640861 LAMA1P25391 3075 aa9.04□□□□□ -0.96
RAI1-207ENST00000640861 CDH23Q9H251 3354 aa9.03□□□□□ -0.96
RAI1-207ENST00000640861 LRBAP50851 2863 aa9.01□□□□□ -0.97
RAI1-207ENST00000640861 NDUFAF8A1L188 74 aa9□□□□□ -0.97
RAI1-207ENST00000640861 BOD1L1Q8NFC6 3051 aa8.98□□□□□ -0.97
RAI1-207ENST00000640861 ZZEF1O43149 2961 aa8.95□□□□□ -0.98
RAI1-207ENST00000640861 C20orf166-AS1Q96NR2 134 aa8.94□□□□□ -0.98
RAI1-207ENST00000640861 DNAH14Q0VDD8 3507 aa8.93□□□□□ -0.98
RAI1-207ENST00000640861 DCHS2Q6V1P9 2916 aa8.91□□□□□ -0.98
RAI1-207ENST00000640861 VCANP13611 3396 aa8.9□□□□□ -0.99
RAI1-207ENST00000640861 CRYBG3Q68DQ2 2970 aa8.88□□□□□ -0.99
RAI1-207ENST00000640861 ZANQ9Y493 2812 aa8.85□□□□□ -0.99
RAI1-207ENST00000640861 TENM3Q9P273 2699 aa8.82□□□□□ -1
RAI1-207ENST00000640861 TNP1P09430 55 aa8.81□□□□□ -1
RAI1-207ENST00000640861 SZT2Q5T011 3432 aa8.8□□□□□ -1
RAI1-207ENST00000640861 COL6A3P12111 3177 aa8.77□□□□□ -1.01
RAI1-207ENST00000640861 CFAP47Q6ZTR5 3102 aa8.76□□□□□ -1.01
RAI1-207ENST00000640861 KRTAP1-4P0C5Y4 121 aa8.76□□□□□ -1.01
RAI1-207ENST00000640861 KRTAP21-3Q3LHN1 58 aa8.7□□□□□ -1.02
RAI1-207ENST00000640861 EYSQ5T1H1 3165 aa8.68□□□□□ -1.02
RAI1-207ENST00000640861 XP32Q5T750 250 aa8.67□□□□□ -1.02
RAI1-207ENST00000640861 C10orf95Q9H7T3 257 aa8.66□□□□□ -1.02
RAI1-207ENST00000640861 NF1P21359 2839 aa8.65□□□□□ -1.02
RAI1-207ENST00000640861 TENM1Q9UKZ4 2725 aa8.65□□□□□ -1.03
RAI1-207ENST00000640861 FBN2P35556 2912 aa8.62□□□□□ -1.03
RAI1-207ENST00000640861 H0YAA0 97 aa8.61□□□□□ -1.03
RAI1-207ENST00000640861 SPEGQ15772 3267 aa8.61□□□□□ -1.03
RAI1-207ENST00000640861 PP632Q6XCG6 107 aa8.61□□□□□ -1.03
RAI1-207ENST00000640861 TNRC18O15417 2968 aaPredicted RBP8.56□□□□□ -1.04
RAI1-207ENST00000640861 HRNRQ86YZ3 2850 aaPredicted RBP8.55□□□□□ -1.04
RAI1-207ENST00000640861 KRTAP10-8P60410 259 aa8.51□□□□□ -1.05
RAI1-207ENST00000640861 P0C880 135 aa8.5□□□□□ -1.05
RAI1-207ENST00000640861 TPRXLQ17RH7 258 aa8.47□□□□□ -1.05
RAI1-207ENST00000640861 SPTBN5Q9NRC6 3674 aaKnown RBP8.46□□□□□ -1.05
RAI1-207ENST00000640861 TGP01266 2768 aa8.46□□□□□ -1.05
RAI1-207ENST00000640861 A0A1B0GVY2 172 aa8.46□□□□□ -1.06
RAI1-207ENST00000640861 TENM2Q9NT68 2774 aa8.43□□□□□ -1.06
RAI1-207ENST00000640861 DMXL1Q9Y485 3027 aa8.39□□□□□ -1.07
RAI1-207ENST00000640861 KRTAP13-3Q3SY46 172 aa8.38□□□□□ -1.07
RAI1-207ENST00000640861 CELSR1Q9NYQ6 3014 aa8.37□□□□□ -1.07
RAI1-207ENST00000640861 USP34Q70CQ2 3546 aa8.36□□□□□ -1.07
RAI1-207ENST00000640861 PKD1L1Q8TDX9 2849 aa8.35□□□□□ -1.07
RAI1-207ENST00000640861 MYO15AQ9UKN7 3530 aa8.34□□□□□ -1.07
RAI1-207ENST00000640861 MXRA5Q9NR99 2828 aa8.31□□□□□ -1.08
RAI1-207ENST00000640861 KRTAP10-10P60014 251 aa8.28□□□□□ -1.08
RAI1-207ENST00000640861 LOC400499M0QZD8 3231 aa8.28□□□□□ -1.08
RAI1-207ENST00000640861 PDZD2O15018 2839 aa8.27□□□□□ -1.08
RAI1-207ENST00000640861 VWFP04275 2813 aa8.21□□□□□ -1.1
RAI1-207ENST00000640861 PRO2289Q9P1D8 64 aa8.17□□□□□ -1.1
RAI1-207ENST00000640861 KRTAP12-2P59991 146 aa8.07□□□□□ -1.12
RAI1-207ENST00000640861 DCHS1Q96JQ0 3298 aa8.04□□□□□ -1.12
RAI1-207ENST00000640861 WDFY3Q8IZQ1 3526 aa8.03□□□□□ -1.12
RAI1-207ENST00000640861 SRRM2Q9UQ35 2752 aaKnown RBP7.99□□□□□ -1.13
RAI1-207ENST00000640861 KRTAP12-1P59990 96 aa7.95□□□□□ -1.14
RAI1-207ENST00000640861 KRTAP13-4Q3LI77 160 aa7.94□□□□□ -1.14
RAI1-207ENST00000640861 KRTAP3-1Q9BYR8 98 aa7.93□□□□□ -1.14
RAI1-207ENST00000640861 FBN1P35555 2871 aaKnown RBP7.92□□□□□ -1.14
RAI1-207ENST00000640861 RELNP78509 3460 aa7.91□□□□□ -1.14
RAI1-207ENST00000640861 ZFHX4Q86UP3 3567 aa7.83□□□□□ -1.16
RAI1-207ENST00000640861 ASPMQ8IZT6 3477 aa7.8□□□□□ -1.16
RAI1-207ENST00000640861 FBN3Q75N90 2809 aa7.8□□□□□ -1.16
RAI1-207ENST00000640861 KRTAP15-1Q3LI76 137 aa7.77□□□□□ -1.17
RAI1-207ENST00000640861 DMDP11532 3685 aa7.76□□□□□ -1.17
RAI1-207ENST00000640861 KRTAP10-6P60371 365 aaPredicted RBP7.73□□□□□ -1.17
RAI1-207ENST00000640861 LAMA5O15230 3695 aa7.72□□□□□ -1.17
RAI1-207ENST00000640861 MUC3AQ02505 3323 aa7.7□□□□□ -1.18
RAI1-207ENST00000640861 MEGF8Q7Z7M0 2845 aa7.69□□□□□ -1.18
RAI1-207ENST00000640861 OTOGQ6ZRI0 2925 aa7.67□□□□□ -1.18
RAI1-207ENST00000640861 SMG1Q96Q15 3661 aaKnown RBP7.66□□□□□ -1.18
RAI1-207ENST00000640861 CSMD1Q96PZ7 3565 aa7.65□□□□□ -1.19
RAI1-207ENST00000640861 COL7A1Q02388 2944 aa7.62□□□□□ -1.19
RAI1-207ENST00000640861 INE1O15225 51 aa7.61□□□□□ -1.19
RAI1-207ENST00000640861 NBPF19A0A087WUL8 3843 aa7.52□□□□□ -1.21
RAI1-207ENST00000640861 ZFHX3Q15911 3703 aa7.51□□□□□ -1.21
RAI1-207ENST00000640861 SVEP1Q4LDE5 3571 aa7.45□□□□□ -1.22
RAI1-207ENST00000640861 MT1HL1P0DM35 61 aa7.45□□□□□ -1.22
RAI1-207ENST00000640861 KRTAP3-2Q9BYR7 98 aa7.44□□□□□ -1.22
RAI1-207ENST00000640861 KRTAP3-3Q9BYR6 98 aa7.41□□□□□ -1.22
RAI1-207ENST00000640861 ANK3Q12955 4377 aaKnown RBP7.32□□□□□ -1.24
RAI1-207ENST00000640861 SPENQ96T58 3664 aaKnown RBP7.27□□□□□ -1.25
RAI1-207ENST00000640861 KRTAP23-1A1A580 65 aa7.26□□□□□ -1.25
RAI1-207ENST00000640861 KRTAP10-4P60372 401 aaPredicted RBP7.25□□□□□ -1.25
RAI1-207ENST00000640861 CUBNO60494 3623 aa7.24□□□□□ -1.25
RAI1-207ENST00000640861 KRTAP10-12P60413 245 aa7.23□□□□□ -1.25
RAI1-207ENST00000640861 TRRAPQ9Y4A5 3859 aa7.22□□□□□ -1.25
RAI1-207ENST00000640861 BSNQ9UPA5 3926 aa7.2□□□□□ -1.26
RAI1-207ENST00000640861 CSMD2Q7Z408 3487 aa7.2□□□□□ -1.26
RAI1-207ENST00000640861 KRTAP4-5Q9BYR2 181 aa7.1□□□□□ -1.27
RAI1-207ENST00000640861 KRTAP12-3P60328 96 aa7.07□□□□□ -1.28
RAI1-207ENST00000640861 CRCT1Q9UGL9 99 aa7.03□□□□□ -1.28
RAI1-207ENST00000640861 LCE3AQ5TA76 89 aa6.97□□□□□ -1.29
RAI1-207ENST00000640861 LORP23490 312 aaPredicted RBP6.97□□□□□ -1.29
RAI1-207ENST00000640861 HUWE1Q7Z6Z7 4374 aaKnown RBP6.95□□□□□ -1.3
RAI1-207ENST00000640861 VPS13CQ709C8 3753 aa6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms