RNA–Protein interactions for RNA: ENST00000640640.1

SCARB2-223, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5 BASIC

Gene SCARB2, Length 4,608 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-223ENST00000640640 CELSR1Q9NYQ6 3014 aa10.34□□□□□ -0.75
SCARB2-223ENST00000640640 A0A0D9SG42 100 aa10.32□□□□□ -0.76
SCARB2-223ENST00000640640 SPINK7P58062 85 aa10.3□□□□□ -0.76
SCARB2-223ENST00000640640 TENM3Q9P273 2699 aa10.3□□□□□ -0.76
SCARB2-223ENST00000640640 ZFHX4Q86UP3 3567 aa10.29□□□□□ -0.76
SCARB2-223ENST00000640640 DMDP11532 3685 aa10.27□□□□□ -0.76
SCARB2-223ENST00000640640 A0A1B0GU33 70 aa10.27□□□□□ -0.77
SCARB2-223ENST00000640640 LINC01554Q52M75 96 aa10.26□□□□□ -0.77
SCARB2-223ENST00000640640 Q5VSD8 79 aa10.26□□□□□ -0.77
SCARB2-223ENST00000640640 CRIPTQ9P021 101 aa10.25□□□□□ -0.77
SCARB2-223ENST00000640640 Q5VV11 94 aa10.25□□□□□ -0.77
SCARB2-223ENST00000640640 NOTCH2NLQ7Z3S9 236 aa10.24□□□□□ -0.77
SCARB2-223ENST00000640640 SPINT4Q6UDR6 99 aa10.24□□□□□ -0.77
SCARB2-223ENST00000640640 KRTAP13-1Q8IUC0 172 aa10.22□□□□□ -0.77
SCARB2-223ENST00000640640 TENM1Q9UKZ4 2725 aa10.2□□□□□ -0.78
SCARB2-223ENST00000640640 LCA10Q71F78 164 aa10.2□□□□□ -0.78
SCARB2-223ENST00000640640 DMAC1Q96GE9 116 aa10.18□□□□□ -0.78
SCARB2-223ENST00000640640 ASB16-AS1Q495Z4 193 aa10.14□□□□□ -0.79
SCARB2-223ENST00000640640 CSAG1Q6PB30 78 aa10.1□□□□□ -0.79
SCARB2-223ENST00000640640 PDZD2O15018 2839 aa10.09□□□□□ -0.79
SCARB2-223ENST00000640640 KRTAP13-2Q52LG2 175 aa10.08□□□□□ -0.8
SCARB2-223ENST00000640640 PKD1L1Q8TDX9 2849 aa10.08□□□□□ -0.8
SCARB2-223ENST00000640640 S4R3F8 94 aa10.08□□□□□ -0.8
SCARB2-223ENST00000640640 FBN1P35555 2871 aaKnown RBP10.06□□□□□ -0.8
SCARB2-223ENST00000640640 VWFP04275 2813 aa10.04□□□□□ -0.8
SCARB2-223ENST00000640640 OTOGQ6ZRI0 2925 aa10.01□□□□□ -0.81
SCARB2-223ENST00000640640 RPS29P62273 56 aaKnown RBP9.99□□□□□ -0.81
SCARB2-223ENST00000640640 SEC61BP60468 96 aaKnown RBP9.98□□□□□ -0.81
SCARB2-223ENST00000640640 KRTAP21-3Q3LHN1 58 aa9.97□□□□□ -0.81
SCARB2-223ENST00000640640 SMG1Q96Q15 3661 aaKnown RBP9.97□□□□□ -0.81
SCARB2-223ENST00000640640 CSMD1Q96PZ7 3565 aa9.96□□□□□ -0.82
SCARB2-223ENST00000640640 TENM2Q9NT68 2774 aa9.96□□□□□ -0.82
SCARB2-223ENST00000640640 TGP01266 2768 aa9.94□□□□□ -0.82
SCARB2-223ENST00000640640 CAMK2N1Q7Z7J9 78 aa9.92□□□□□ -0.82
SCARB2-223ENST00000640640 PRAC1Q96KF2 57 aa9.91□□□□□ -0.82
SCARB2-223ENST00000640640 M0R2T5 61 aa9.88□□□□□ -0.83
SCARB2-223ENST00000640640 R4GN34 69 aa9.87□□□□□ -0.83
SCARB2-223ENST00000640640 H1FX-AS1Q4G0G2 97 aa9.83□□□□□ -0.84
SCARB2-223ENST00000640640 RPL37P61927 97 aaKnown RBP9.82□□□□□ -0.84
SCARB2-223ENST00000640640 NBPF19A0A087WUL8 3843 aa9.81□□□□□ -0.84
SCARB2-223ENST00000640640 SVEP1Q4LDE5 3571 aa9.78□□□□□ -0.84
SCARB2-223ENST00000640640 ZFHX3Q15911 3703 aa9.77□□□□□ -0.85
SCARB2-223ENST00000640640 SPATA8Q6RVD6 105 aa9.75□□□□□ -0.85
SCARB2-223ENST00000640640 KRTAP1-4P0C5Y4 121 aa9.73□□□□□ -0.85
SCARB2-223ENST00000640640 CUBNO60494 3623 aa9.7□□□□□ -0.86
SCARB2-223ENST00000640640 M0QZ58 72 aa9.69□□□□□ -0.86
SCARB2-223ENST00000640640 ADM2Q7Z4H4 148 aa9.68□□□□□ -0.86
SCARB2-223ENST00000640640 A8MUU9 505 aa9.65□□□□□ -0.87
SCARB2-223ENST00000640640 CSMD2Q7Z408 3487 aa9.64□□□□□ -0.87
SCARB2-223ENST00000640640 ROMO1P60602 79 aa9.63□□□□□ -0.87
SCARB2-223ENST00000640640 C20orf166-AS1Q96NR2 134 aa9.62□□□□□ -0.87
SCARB2-223ENST00000640640 SPENQ96T58 3664 aaKnown RBP9.61□□□□□ -0.87
SCARB2-223ENST00000640640 A8MU10 97 aa9.58□□□□□ -0.88
SCARB2-223ENST00000640640 LUZP6Q538Z0 58 aa9.57□□□□□ -0.88
SCARB2-223ENST00000640640 A6NN06 94 aa9.52□□□□□ -0.89
SCARB2-223ENST00000640640 SRRM2Q9UQ35 2752 aaKnown RBP9.52□□□□□ -0.89
SCARB2-223ENST00000640640 KRTAP16-1A8MUX0 517 aa9.42□□□□□ -0.9
SCARB2-223ENST00000640640 FBN3Q75N90 2809 aa9.41□□□□□ -0.9
SCARB2-223ENST00000640640 XP32Q5T750 250 aa9.38□□□□□ -0.91
SCARB2-223ENST00000640640 BSNQ9UPA5 3926 aa9.38□□□□□ -0.91
SCARB2-223ENST00000640640 TRRAPQ9Y4A5 3859 aa9.36□□□□□ -0.91
SCARB2-223ENST00000640640 ANK3Q12955 4377 aaKnown RBP9.31□□□□□ -0.92
SCARB2-223ENST00000640640 PLAC4Q8WY50 150 aa9.29□□□□□ -0.92
SCARB2-223ENST00000640640 KRTAP25-1Q3LHN0 102 aa9.26□□□□□ -0.93
SCARB2-223ENST00000640640 MEGF8Q7Z7M0 2845 aa9.23□□□□□ -0.93
SCARB2-223ENST00000640640 A0A1B0GVY2 172 aa9.21□□□□□ -0.94
SCARB2-223ENST00000640640 KRTAP13-3Q3SY46 172 aa9.2□□□□□ -0.94
SCARB2-223ENST00000640640 TPRXLQ17RH7 258 aa9.19□□□□□ -0.94
SCARB2-223ENST00000640640 COL7A1Q02388 2944 aa9.19□□□□□ -0.94
SCARB2-223ENST00000640640 KRTAP10-8P60410 259 aa9.13□□□□□ -0.95
SCARB2-223ENST00000640640 H3BS24 57 aa9.11□□□□□ -0.95
SCARB2-223ENST00000640640 H0YAA0 97 aa9.1□□□□□ -0.95
SCARB2-223ENST00000640640 A0A0A0MQY5 61 aa8.97□□□□□ -0.97
SCARB2-223ENST00000640640 P0C880 135 aa8.95□□□□□ -0.98
SCARB2-223ENST00000640640 VPS13CQ709C8 3753 aa8.93□□□□□ -0.98
SCARB2-223ENST00000640640 TNP1P09430 55 aa8.93□□□□□ -0.98
SCARB2-223ENST00000640640 C10orf95Q9H7T3 257 aa8.85□□□□□ -0.99
SCARB2-223ENST00000640640 ZNF469Q96JG9 3925 aaPredicted RBP8.78□□□□□ -1
SCARB2-223ENST00000640640 NDUFAF8A1L188 74 aa8.75□□□□□ -1.01
SCARB2-223ENST00000640640 KRTAP3-1Q9BYR8 98 aa8.74□□□□□ -1.01
SCARB2-223ENST00000640640 PP632Q6XCG6 107 aa8.71□□□□□ -1.02
SCARB2-223ENST00000640640 KRTAP10-10P60014 251 aa8.66□□□□□ -1.02
SCARB2-223ENST00000640640 HUWE1Q7Z6Z7 4374 aaKnown RBP8.65□□□□□ -1.03
SCARB2-223ENST00000640640 KRTAP12-2P59991 146 aa8.53□□□□□ -1.04
SCARB2-223ENST00000640640 MT1HL1P0DM35 61 aa8.51□□□□□ -1.05
SCARB2-223ENST00000640640 CSMD3Q7Z407 3707 aa8.5□□□□□ -1.05
SCARB2-223ENST00000640640 KRTAP10-4P60372 401 aaPredicted RBP8.49□□□□□ -1.05
SCARB2-223ENST00000640640 KRTAP12-1P59990 96 aa8.45□□□□□ -1.06
SCARB2-223ENST00000640640 KRTAP10-6P60371 365 aaPredicted RBP8.43□□□□□ -1.06
SCARB2-223ENST00000640640 AKAP9Q99996 3911 aa8.42□□□□□ -1.06
SCARB2-223ENST00000640640 KRTAP13-4Q3LI77 160 aa8.38□□□□□ -1.07
SCARB2-223ENST00000640640 PRO2289Q9P1D8 64 aa8.35□□□□□ -1.07
SCARB2-223ENST00000640640 DNAH9Q9NYC9 4486 aa8.34□□□□□ -1.07
SCARB2-223ENST00000640640 KRTAP4-5Q9BYR2 181 aa8.24□□□□□ -1.09
SCARB2-223ENST00000640640 KRTAP3-3Q9BYR6 98 aa8.24□□□□□ -1.09
SCARB2-223ENST00000640640 DNHD1Q96M86 4753 aa8.21□□□□□ -1.1
SCARB2-223ENST00000640640 KRTAP3-2Q9BYR7 98 aa8.19□□□□□ -1.1
SCARB2-223ENST00000640640 PLECQ15149 4684 aaKnown RBP8.18□□□□□ -1.1
SCARB2-223ENST00000640640 DNAH5Q8TE73 4624 aa8.17□□□□□ -1.1
SCARB2-223ENST00000640640 DNAH11Q96DT5 4516 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms