RNA–Protein interactions for RNA: ENST00000639913.1

KCNMA1-273, Transcript of potassium calcium-activated channel subfamily M alpha 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene KCNMA1, Length 12,071 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMA1-273ENST00000639913 RPS29P62273 56 aaKnown RBP4.63□□□□□ -1.67
KCNMA1-273ENST00000639913 PCNTO95613 3336 aa4.62□□□□□ -1.67
KCNMA1-273ENST00000639913 UTRNP46939 3433 aa4.62□□□□□ -1.67
KCNMA1-273ENST00000639913 A0A1B0GVY2 172 aa4.61□□□□□ -1.67
KCNMA1-273ENST00000639913 KRTAP1-4P0C5Y4 121 aa4.59□□□□□ -1.68
KCNMA1-273ENST00000639913 ZZEF1O43149 2961 aa4.57□□□□□ -1.68
KCNMA1-273ENST00000639913 TENM1Q9UKZ4 2725 aa4.57□□□□□ -1.68
KCNMA1-273ENST00000639913 FBN2P35556 2912 aa4.56□□□□□ -1.68
KCNMA1-273ENST00000639913 CRYBG3Q68DQ2 2970 aa4.56□□□□□ -1.68
KCNMA1-273ENST00000639913 VPS13AQ96RL7 3174 aa4.55□□□□□ -1.68
KCNMA1-273ENST00000639913 HRNRQ86YZ3 2850 aaPredicted RBP4.55□□□□□ -1.68
KCNMA1-273ENST00000639913 NF1P21359 2839 aa4.55□□□□□ -1.68
KCNMA1-273ENST00000639913 KRTAP10-8P60410 259 aa4.54□□□□□ -1.68
KCNMA1-273ENST00000639913 P0C880 135 aa4.54□□□□□ -1.68
KCNMA1-273ENST00000639913 TGP01266 2768 aa4.54□□□□□ -1.68
KCNMA1-273ENST00000639913 TNP1P09430 55 aa4.54□□□□□ -1.68
KCNMA1-273ENST00000639913 XP32Q5T750 250 aa4.54□□□□□ -1.68
KCNMA1-273ENST00000639913 TENM2Q9NT68 2774 aa4.53□□□□□ -1.68
KCNMA1-273ENST00000639913 FRYLO94915 3013 aa4.53□□□□□ -1.68
KCNMA1-273ENST00000639913 REV3LO60673 3130 aa4.52□□□□□ -1.69
KCNMA1-273ENST00000639913 COL12A1Q99715 3063 aa4.49□□□□□ -1.69
KCNMA1-273ENST00000639913 MKI67P46013 3256 aaKnown RBP4.46□□□□□ -1.7
KCNMA1-273ENST00000639913 LAMA1P25391 3075 aa4.46□□□□□ -1.7
KCNMA1-273ENST00000639913 BOD1L1Q8NFC6 3051 aa4.42□□□□□ -1.7
KCNMA1-273ENST00000639913 LAMA3Q16787 3333 aa4.42□□□□□ -1.7
KCNMA1-273ENST00000639913 UNC80Q8N2C7 3258 aa4.42□□□□□ -1.7
KCNMA1-273ENST00000639913 PKD1L1Q8TDX9 2849 aa4.42□□□□□ -1.7
KCNMA1-273ENST00000639913 KRTAP13-3Q3SY46 172 aa4.41□□□□□ -1.7
KCNMA1-273ENST00000639913 ADGRG4Q8IZF6 3080 aa4.4□□□□□ -1.7
KCNMA1-273ENST00000639913 VWFP04275 2813 aa4.4□□□□□ -1.71
KCNMA1-273ENST00000639913 KRTAP12-2P59991 146 aa4.39□□□□□ -1.71
KCNMA1-273ENST00000639913 TPRXLQ17RH7 258 aa4.38□□□□□ -1.71
KCNMA1-273ENST00000639913 PP632Q6XCG6 107 aa4.37□□□□□ -1.71
KCNMA1-273ENST00000639913 BRCA2P51587 3418 aa4.37□□□□□ -1.71
KCNMA1-273ENST00000639913 PDZD2O15018 2839 aa4.37□□□□□ -1.71
KCNMA1-273ENST00000639913 TNRC18O15417 2968 aaPredicted RBP4.34□□□□□ -1.71
KCNMA1-273ENST00000639913 KRTAP10-10P60014 251 aa4.34□□□□□ -1.72
KCNMA1-273ENST00000639913 MXRA5Q9NR99 2828 aa4.33□□□□□ -1.72
KCNMA1-273ENST00000639913 SRRM2Q9UQ35 2752 aaKnown RBP4.31□□□□□ -1.72
KCNMA1-273ENST00000639913 COL6A3P12111 3177 aa4.28□□□□□ -1.72
KCNMA1-273ENST00000639913 KRTAP3-1Q9BYR8 98 aa4.27□□□□□ -1.73
KCNMA1-273ENST00000639913 CFAP47Q6ZTR5 3102 aa4.27□□□□□ -1.73
KCNMA1-273ENST00000639913 CELSR3Q9NYQ7 3312 aa4.26□□□□□ -1.73
KCNMA1-273ENST00000639913 XIRP2A4UGR9 3374 aa4.26□□□□□ -1.73
KCNMA1-273ENST00000639913 KRTAP13-4Q3LI77 160 aa4.24□□□□□ -1.73
KCNMA1-273ENST00000639913 KRTAP12-1P59990 96 aa4.24□□□□□ -1.73
KCNMA1-273ENST00000639913 EYSQ5T1H1 3165 aa4.23□□□□□ -1.73
KCNMA1-273ENST00000639913 DMXL1Q9Y485 3027 aa4.22□□□□□ -1.73
KCNMA1-273ENST00000639913 FBN3Q75N90 2809 aa4.17□□□□□ -1.74
KCNMA1-273ENST00000639913 CELSR1Q9NYQ6 3014 aa4.15□□□□□ -1.75
KCNMA1-273ENST00000639913 FBN1P35555 2871 aaKnown RBP4.15□□□□□ -1.75
KCNMA1-273ENST00000639913 KRTAP10-6P60371 365 aaPredicted RBP4.14□□□□□ -1.75
KCNMA1-273ENST00000639913 KRTAP21-3Q3LHN1 58 aa4.09□□□□□ -1.75
KCNMA1-273ENST00000639913 VCANP13611 3396 aa4.06□□□□□ -1.76
KCNMA1-273ENST00000639913 PRO2289Q9P1D8 64 aa4.06□□□□□ -1.76
KCNMA1-273ENST00000639913 KRTAP15-1Q3LI76 137 aa4.06□□□□□ -1.76
KCNMA1-273ENST00000639913 SZT2Q5T011 3432 aa4.05□□□□□ -1.76
KCNMA1-273ENST00000639913 MEGF8Q7Z7M0 2845 aa4.05□□□□□ -1.76
KCNMA1-273ENST00000639913 CDH23Q9H251 3354 aa4.03□□□□□ -1.76
KCNMA1-273ENST00000639913 KRTAP3-2Q9BYR7 98 aa4.02□□□□□ -1.77
KCNMA1-273ENST00000639913 DNAH14Q0VDD8 3507 aa3.99□□□□□ -1.77
KCNMA1-273ENST00000639913 CRCT1Q9UGL9 99 aa3.97□□□□□ -1.77
KCNMA1-273ENST00000639913 KRTAP3-3Q9BYR6 98 aa3.96□□□□□ -1.78
KCNMA1-273ENST00000639913 SPTBN5Q9NRC6 3674 aaKnown RBP3.96□□□□□ -1.78
KCNMA1-273ENST00000639913 MYO15AQ9UKN7 3530 aa3.95□□□□□ -1.78
KCNMA1-273ENST00000639913 COL7A1Q02388 2944 aa3.95□□□□□ -1.78
KCNMA1-273ENST00000639913 ANK3Q12955 4377 aaKnown RBP3.95□□□□□ -1.78
KCNMA1-273ENST00000639913 SPEGQ15772 3267 aa3.93□□□□□ -1.78
KCNMA1-273ENST00000639913 OTOGQ6ZRI0 2925 aa3.93□□□□□ -1.78
KCNMA1-273ENST00000639913 MT1HL1P0DM35 61 aa3.89□□□□□ -1.79
KCNMA1-273ENST00000639913 DCHS1Q96JQ0 3298 aa3.87□□□□□ -1.79
KCNMA1-273ENST00000639913 KRTAP4-5Q9BYR2 181 aa3.85□□□□□ -1.79
KCNMA1-273ENST00000639913 LORP23490 312 aaPredicted RBP3.85□□□□□ -1.79
KCNMA1-273ENST00000639913 USP34Q70CQ2 3546 aa3.83□□□□□ -1.8
KCNMA1-273ENST00000639913 LOC400499M0QZD8 3231 aa3.82□□□□□ -1.8
KCNMA1-273ENST00000639913 DNAH11Q96DT5 4516 aa3.82□□□□□ -1.8
KCNMA1-273ENST00000639913 HUWE1Q7Z6Z7 4374 aaKnown RBP3.82□□□□□ -1.8
KCNMA1-273ENST00000639913 DNAH2Q9P225 4427 aa3.82□□□□□ -1.8
KCNMA1-273ENST00000639913 KRTAP10-4P60372 401 aaPredicted RBP3.79□□□□□ -1.8
KCNMA1-273ENST00000639913 KRTAP10-12P60413 245 aa3.79□□□□□ -1.8
KCNMA1-273ENST00000639913 ALMS1Q8TCU4 4167 aa3.78□□□□□ -1.8
KCNMA1-273ENST00000639913 LCE3AQ5TA76 89 aa3.76□□□□□ -1.81
KCNMA1-273ENST00000639913 WDFY3Q8IZQ1 3526 aa3.75□□□□□ -1.81
KCNMA1-273ENST00000639913 KRTAP12-3P60328 96 aa3.72□□□□□ -1.81
KCNMA1-273ENST00000639913 INE1O15225 51 aa3.71□□□□□ -1.81
KCNMA1-273ENST00000639913 TRRAPQ9Y4A5 3859 aa3.71□□□□□ -1.82
KCNMA1-273ENST00000639913 PLECQ15149 4684 aaKnown RBP3.71□□□□□ -1.82
KCNMA1-273ENST00000639913 RELNP78509 3460 aa3.68□□□□□ -1.82
KCNMA1-273ENST00000639913 ZFHX4Q86UP3 3567 aa3.66□□□□□ -1.82
KCNMA1-273ENST00000639913 DNAH10Q8IVF4 4471 aa3.66□□□□□ -1.82
KCNMA1-273ENST00000639913 ZFHX3Q15911 3703 aa3.66□□□□□ -1.82
KCNMA1-273ENST00000639913 NBPF19A0A087WUL8 3843 aa3.64□□□□□ -1.83
KCNMA1-273ENST00000639913 CSMD1Q96PZ7 3565 aa3.62□□□□□ -1.83
KCNMA1-273ENST00000639913 DMDP11532 3685 aa3.61□□□□□ -1.83
KCNMA1-273ENST00000639913 DNAH5Q8TE73 4624 aa3.61□□□□□ -1.83
KCNMA1-273ENST00000639913 KRTAP4-1Q9BYQ7 146 aa3.6□□□□□ -1.83
KCNMA1-273ENST00000639913 SMG1Q96Q15 3661 aaKnown RBP3.59□□□□□ -1.83
KCNMA1-273ENST00000639913 KRTAP10-5P60370 271 aa3.58□□□□□ -1.84
KCNMA1-273ENST00000639913 DNAH1Q9P2D7 4330 aa3.56□□□□□ -1.84
KCNMA1-273ENST00000639913 DNAH17Q9UFH2 4485 aa3.54□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 719.4 ms