RNA–Protein interactions for RNA: ENST00000639659.1

SYNE2-228, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best) BASIC

Gene SYNE2, Length 1,290 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-228ENST00000639659 ZCCHC13Q8WW36 166 aaKnown RBP7.21□□□□□ -1.26
SYNE2-228ENST00000639659 LINC00472Q9H8W2 130 aa7.2□□□□□ -1.26
SYNE2-228ENST00000639659 A0A1B0GX51 115 aa7.19□□□□□ -1.26
SYNE2-228ENST00000639659 CCKP06307 115 aa7.19□□□□□ -1.26
SYNE2-228ENST00000639659 C2orf91Q6ZV80 131 aa7.19□□□□□ -1.26
SYNE2-228ENST00000639659 C8orf87E5RJ46 101 aa7.18□□□□□ -1.26
SYNE2-228ENST00000639659 DNAL4O96015 105 aa7.18□□□□□ -1.26
SYNE2-228ENST00000639659 WFDC13Q8IUB5 93 aa7.18□□□□□ -1.26
SYNE2-228ENST00000639659 VPS25Q9BRG1 176 aa7.18□□□□□ -1.26
SYNE2-228ENST00000639659 A0A1B0GVX0 72 aa7.17□□□□□ -1.26
SYNE2-228ENST00000639659 CEND1Q8N111 149 aa7.17□□□□□ -1.26
SYNE2-228ENST00000639659 ORMDL1Q9P0S3 153 aa7.16□□□□□ -1.26
SYNE2-228ENST00000639659 TRIAP1O43715 76 aa7.15□□□□□ -1.26
SYNE2-228ENST00000639659 LYRM7Q5U5X0 104 aa7.15□□□□□ -1.26
SYNE2-228ENST00000639659 UQCR10Q9UDW1 63 aa7.15□□□□□ -1.26
SYNE2-228ENST00000639659 TMEM238LA0A1B0GVL6 79 aa7.14□□□□□ -1.27
SYNE2-228ENST00000639659 TSTD3H0UI37 97 aa7.14□□□□□ -1.27
SYNE2-228ENST00000639659 PRO1854Q9UHT4 67 aa7.14□□□□□ -1.27
SYNE2-228ENST00000639659 HSD52Q0P140 79 aa7.11□□□□□ -1.27
SYNE2-228ENST00000639659 FXYD2P54710 66 aa7.1□□□□□ -1.27
SYNE2-228ENST00000639659 PSMB2P49721 201 aa7.09□□□□□ -1.27
SYNE2-228ENST00000639659 TMEM256-PLSCR3K7ERE1 68 aa7.08□□□□□ -1.28
SYNE2-228ENST00000639659 H3BQ85 93 aa7.07□□□□□ -1.28
SYNE2-228ENST00000639659 PCP4L1A6NKN8 68 aa7.03□□□□□ -1.28
SYNE2-228ENST00000639659 J3KT08 172 aa7.03□□□□□ -1.28
SYNE2-228ENST00000639659 NDUFB1O75438 58 aa7.03□□□□□ -1.28
SYNE2-228ENST00000639659 K7ERJ3 54 aa7.02□□□□□ -1.29
SYNE2-228ENST00000639659 DSCR8Q96T75 97 aa7.02□□□□□ -1.29
SYNE2-228ENST00000639659 NEBP20929 6669 aa7.01□□□□□ -1.29
SYNE2-228ENST00000639659 LOC100996750A0A140TA64 210 aa7.01□□□□□ -1.29
SYNE2-228ENST00000639659 COX6CP09669 75 aa7.01□□□□□ -1.29
SYNE2-228ENST00000639659 UBE2V1Q13404 147 aa7.01□□□□□ -1.29
SYNE2-228ENST00000639659 KRTAP4-6Q9BYQ5 205 aa7.01□□□□□ -1.29
SYNE2-228ENST00000639659 RBM3P98179 157 aaKnown RBP7□□□□□ -1.29
SYNE2-228ENST00000639659 C8orf17Q9NRJ1 99 aa7□□□□□ -1.29
SYNE2-228ENST00000639659 H1FX-AS1Q4G0G2 97 aa6.99□□□□□ -1.29
SYNE2-228ENST00000639659 IGKV3D-7A0A0C4DH55 119 aa6.97□□□□□ -1.29
SYNE2-228ENST00000639659 M0R143 59 aa6.97□□□□□ -1.29
SYNE2-228ENST00000639659 A6NN06 94 aa6.95□□□□□ -1.3
SYNE2-228ENST00000639659 C9JAW5 83 aa6.95□□□□□ -1.3
SYNE2-228ENST00000639659 MUC12Q9UKN1 5478 aa6.94□□□□□ -1.3
SYNE2-228ENST00000639659 SCGB1C2P0DMR2 95 aa6.94□□□□□ -1.3
SYNE2-228ENST00000639659 KRTAP20-1Q3LI63 56 aa6.94□□□□□ -1.3
SYNE2-228ENST00000639659 Q6ZQT0 140 aa6.94□□□□□ -1.3
SYNE2-228ENST00000639659 Q6ZVQ6 151 aa6.94□□□□□ -1.3
SYNE2-228ENST00000639659 C21orf62-AS1Q17RA5 79 aa6.92□□□□□ -1.3
SYNE2-228ENST00000639659 IGKV2D-30A0A075B6S6 120 aa6.89□□□□□ -1.31
SYNE2-228ENST00000639659 FAM236AA0A1B0GUQ0 79 aa6.89□□□□□ -1.31
SYNE2-228ENST00000639659 FAM236BA0A1B0GV22 79 aa6.89□□□□□ -1.31
SYNE2-228ENST00000639659 NDUFS5O43920 106 aa6.89□□□□□ -1.31
SYNE2-228ENST00000639659 IGKV2-30P06310 120 aa6.89□□□□□ -1.31
SYNE2-228ENST00000639659 BAALC-AS2P0C853 105 aa6.87□□□□□ -1.31
SYNE2-228ENST00000639659 BATFQ16520 125 aa6.87□□□□□ -1.31
SYNE2-228ENST00000639659 MRPL34Q9BQ48 92 aaKnown RBP6.86□□□□□ -1.31
SYNE2-228ENST00000639659 COL5A1-AS1Q5SY13 56 aa6.85□□□□□ -1.31
SYNE2-228ENST00000639659 TMEM254Q8TBM7 123 aa6.84□□□□□ -1.31
SYNE2-228ENST00000639659 NAA38Q9BRA0 125 aaKnown RBP6.84□□□□□ -1.31
SYNE2-228ENST00000639659 MMP24-AS1A0A0U1RRL7 71 aa6.83□□□□□ -1.32
SYNE2-228ENST00000639659 Q5VV11 94 aa6.83□□□□□ -1.32
SYNE2-228ENST00000639659 PRR15Q8IV56 129 aa6.83□□□□□ -1.32
SYNE2-228ENST00000639659 ATXN8Q156A1 80 aa6.82□□□□□ -1.32
SYNE2-228ENST00000639659 C5orf47Q569G3 176 aa6.82□□□□□ -1.32
SYNE2-228ENST00000639659 MT1BP07438 61 aa6.81□□□□□ -1.32
SYNE2-228ENST00000639659 C7orf65Q6ZTY9 151 aa6.81□□□□□ -1.32
SYNE2-228ENST00000639659 hDV103S1A0JD37 113 aa6.79□□□□□ -1.32
SYNE2-228ENST00000639659 C9orf118A6NHY6 69 aa6.78□□□□□ -1.32
SYNE2-228ENST00000639659 NREPQ16612 68 aa6.78□□□□□ -1.32
SYNE2-228ENST00000639659 JMJD7-PLA2G4BH0Y9G9 81 aa6.77□□□□□ -1.33
SYNE2-228ENST00000639659 C4orf26Q17RF5 130 aa6.77□□□□□ -1.33
SYNE2-228ENST00000639659 C14orf132Q9NPU4 83 aa6.77□□□□□ -1.33
SYNE2-228ENST00000639659 LOC110117498A0A087WWA1 95 aa6.76□□□□□ -1.33
SYNE2-228ENST00000639659 TAX1BP3O14907 124 aa6.76□□□□□ -1.33
SYNE2-228ENST00000639659 K7EQZ3 153 aa6.75□□□□□ -1.33
SYNE2-228ENST00000639659 A0A1B0GW54 56 aa6.74□□□□□ -1.33
SYNE2-228ENST00000639659 Q5W150 140 aa6.74□□□□□ -1.33
SYNE2-228ENST00000639659 KRTAP10-5P60370 271 aa6.73□□□□□ -1.33
SYNE2-228ENST00000639659 A0A1W2PPM0 123 aa6.72□□□□□ -1.33
SYNE2-228ENST00000639659 PDE6GP18545 87 aa6.72□□□□□ -1.33
SYNE2-228ENST00000639659 MDN1Q9NU22 5596 aa6.71□□□□□ -1.34
SYNE2-228ENST00000639659 KRTAP5-9P26371 169 aa6.7□□□□□ -1.34
SYNE2-228ENST00000639659 KRTAP19-8Q3LI54 63 aa6.7□□□□□ -1.34
SYNE2-228ENST00000639659 KMT2DO14686 5537 aa6.7□□□□□ -1.34
SYNE2-228ENST00000639659 IMUPQ9GZP8 106 aa6.69□□□□□ -1.34
SYNE2-228ENST00000639659 S4R3F8 94 aa6.69□□□□□ -1.34
SYNE2-228ENST00000639659 SPRR2GQ9BYE4 73 aa6.68□□□□□ -1.34
SYNE2-228ENST00000639659 A0A1B0GV90 55 aa6.66□□□□□ -1.34
SYNE2-228ENST00000639659 HCG22E2RYF7 251 aa6.66□□□□□ -1.34
SYNE2-228ENST00000639659 GTF2H5Q6ZYL4 71 aa6.66□□□□□ -1.34
SYNE2-228ENST00000639659 H3BT86 120 aa6.65□□□□□ -1.34
SYNE2-228ENST00000639659 CSAG1Q6PB30 78 aa6.65□□□□□ -1.34
SYNE2-228ENST00000639659 SPCS1Q9Y6A9 102 aa6.65□□□□□ -1.34
SYNE2-228ENST00000639659 BPY2O14599 106 aa6.63□□□□□ -1.35
SYNE2-228ENST00000639659 CASC2Q6XLA1 102 aa6.62□□□□□ -1.35
SYNE2-228ENST00000639659 LCA10Q71F78 164 aa6.62□□□□□ -1.35
SYNE2-228ENST00000639659 KRTAP2-3P0C7H8 128 aa6.61□□□□□ -1.35
SYNE2-228ENST00000639659 Q8N9L7 120 aa6.61□□□□□ -1.35
SYNE2-228ENST00000639659 KRTAP2-4Q9BYR9 128 aa6.61□□□□□ -1.35
SYNE2-228ENST00000639659 K7EP34 96 aa6.6□□□□□ -1.35
SYNE2-228ENST00000639659 KLKP1Q107X0 134 aa6.6□□□□□ -1.35
SYNE2-228ENST00000639659 KRTAP3-1Q9BYR8 98 aa6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 106 ms