RNA–Protein interactions for RNA: ENST00000638914.1

PAX6-245, Transcript of paired box 6, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PAX6, Length 7,300 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-245ENST00000638914 XIRP2A4UGR9 3374 aa6.55□□□□□ -1.36
PAX6-245ENST00000638914 BRCA2P51587 3418 aa6.55□□□□□ -1.36
PAX6-245ENST00000638914 SPATA8Q6RVD6 105 aa6.54□□□□□ -1.36
PAX6-245ENST00000638914 TENM2Q9NT68 2774 aa6.53□□□□□ -1.36
PAX6-245ENST00000638914 TNP1P09430 55 aa6.52□□□□□ -1.37
PAX6-245ENST00000638914 NBEAQ8NFP9 2946 aa6.5□□□□□ -1.37
PAX6-245ENST00000638914 BOD1L1Q8NFC6 3051 aa6.48□□□□□ -1.37
PAX6-245ENST00000638914 KRTAP7-1Q8IUC3 87 aa6.48□□□□□ -1.37
PAX6-245ENST00000638914 PRAC1Q96KF2 57 aa6.47□□□□□ -1.37
PAX6-245ENST00000638914 TPRXLQ17RH7 258 aa6.46□□□□□ -1.38
PAX6-245ENST00000638914 TNRC18O15417 2968 aaPredicted RBP6.44□□□□□ -1.38
PAX6-245ENST00000638914 PKD1L1Q8TDX9 2849 aa6.43□□□□□ -1.38
PAX6-245ENST00000638914 ZANQ9Y493 2812 aa6.42□□□□□ -1.38
PAX6-245ENST00000638914 CYSTM1Q9H1C7 97 aa6.42□□□□□ -1.38
PAX6-245ENST00000638914 ADGRG4Q8IZF6 3080 aa6.41□□□□□ -1.38
PAX6-245ENST00000638914 FREM2Q5SZK8 3169 aa6.39□□□□□ -1.39
PAX6-245ENST00000638914 PRO2289Q9P1D8 64 aa6.38□□□□□ -1.39
PAX6-245ENST00000638914 XP32Q5T750 250 aa6.38□□□□□ -1.39
PAX6-245ENST00000638914 PDZD2O15018 2839 aa6.36□□□□□ -1.39
PAX6-245ENST00000638914 CDH23Q9H251 3354 aa6.36□□□□□ -1.39
PAX6-245ENST00000638914 UNC80Q8N2C7 3258 aa6.35□□□□□ -1.39
PAX6-245ENST00000638914 KRTAP10-8P60410 259 aa6.34□□□□□ -1.39
PAX6-245ENST00000638914 SZT2Q5T011 3432 aa6.33□□□□□ -1.4
PAX6-245ENST00000638914 KRTAP1-4P0C5Y4 121 aa6.33□□□□□ -1.4
PAX6-245ENST00000638914 PP632Q6XCG6 107 aa6.31□□□□□ -1.4
PAX6-245ENST00000638914 KRTAP10-10P60014 251 aa6.31□□□□□ -1.4
PAX6-245ENST00000638914 COL6A3P12111 3177 aa6.31□□□□□ -1.4
PAX6-245ENST00000638914 MXRA5Q9NR99 2828 aa6.3□□□□□ -1.4
PAX6-245ENST00000638914 A8MU10 97 aa6.29□□□□□ -1.4
PAX6-245ENST00000638914 CELSR3Q9NYQ7 3312 aa6.28□□□□□ -1.4
PAX6-245ENST00000638914 EYSQ5T1H1 3165 aa6.27□□□□□ -1.41
PAX6-245ENST00000638914 VCANP13611 3396 aa6.27□□□□□ -1.41
PAX6-245ENST00000638914 VWFP04275 2813 aa6.23□□□□□ -1.41
PAX6-245ENST00000638914 DMXL1Q9Y485 3027 aa6.23□□□□□ -1.41
PAX6-245ENST00000638914 KRTAP25-1Q3LHN0 102 aa6.22□□□□□ -1.41
PAX6-245ENST00000638914 A0A1B0GVY2 172 aa6.21□□□□□ -1.42
PAX6-245ENST00000638914 CELSR1Q9NYQ6 3014 aa6.2□□□□□ -1.42
PAX6-245ENST00000638914 KRTAP13-3Q3SY46 172 aa6.19□□□□□ -1.42
PAX6-245ENST00000638914 FBN2P35556 2912 aa6.19□□□□□ -1.42
PAX6-245ENST00000638914 TGP01266 2768 aa6.18□□□□□ -1.42
PAX6-245ENST00000638914 SRRM2Q9UQ35 2752 aaKnown RBP6.17□□□□□ -1.42
PAX6-245ENST00000638914 CFAP47Q6ZTR5 3102 aa6.13□□□□□ -1.43
PAX6-245ENST00000638914 C10orf95Q9H7T3 257 aa6.11□□□□□ -1.43
PAX6-245ENST00000638914 H3BS24 57 aa6.1□□□□□ -1.43
PAX6-245ENST00000638914 KRTAP16-1A8MUX0 517 aa6.08□□□□□ -1.44
PAX6-245ENST00000638914 A6NN06 94 aa6.05□□□□□ -1.44
PAX6-245ENST00000638914 FBN3Q75N90 2809 aa6.04□□□□□ -1.44
PAX6-245ENST00000638914 DNAH14Q0VDD8 3507 aa6.01□□□□□ -1.45
PAX6-245ENST00000638914 HRNRQ86YZ3 2850 aaPredicted RBP6.01□□□□□ -1.45
PAX6-245ENST00000638914 USP34Q70CQ2 3546 aa5.99□□□□□ -1.45
PAX6-245ENST00000638914 SPEGQ15772 3267 aa5.98□□□□□ -1.45
PAX6-245ENST00000638914 SPTBN5Q9NRC6 3674 aaKnown RBP5.97□□□□□ -1.45
PAX6-245ENST00000638914 NDUFAF8A1L188 74 aa5.93□□□□□ -1.46
PAX6-245ENST00000638914 P0C880 135 aa5.87□□□□□ -1.47
PAX6-245ENST00000638914 H0YAA0 97 aa5.85□□□□□ -1.47
PAX6-245ENST00000638914 DCHS1Q96JQ0 3298 aa5.82□□□□□ -1.48
PAX6-245ENST00000638914 FBN1P35555 2871 aaKnown RBP5.82□□□□□ -1.48
PAX6-245ENST00000638914 COL7A1Q02388 2944 aa5.81□□□□□ -1.48
PAX6-245ENST00000638914 MYO15AQ9UKN7 3530 aa5.74□□□□□ -1.49
PAX6-245ENST00000638914 LOC400499M0QZD8 3231 aa5.72□□□□□ -1.49
PAX6-245ENST00000638914 KRTAP13-4Q3LI77 160 aa5.67□□□□□ -1.5
PAX6-245ENST00000638914 OTOGQ6ZRI0 2925 aa5.65□□□□□ -1.5
PAX6-245ENST00000638914 ASPMQ8IZT6 3477 aa5.65□□□□□ -1.51
PAX6-245ENST00000638914 NBPF19A0A087WUL8 3843 aa5.65□□□□□ -1.51
PAX6-245ENST00000638914 ZFHX3Q15911 3703 aa5.64□□□□□ -1.51
PAX6-245ENST00000638914 MEGF8Q7Z7M0 2845 aa5.64□□□□□ -1.51
PAX6-245ENST00000638914 WDFY3Q8IZQ1 3526 aa5.53□□□□□ -1.52
PAX6-245ENST00000638914 KRTAP12-2P59991 146 aa5.53□□□□□ -1.52
PAX6-245ENST00000638914 MT1HL1P0DM35 61 aa5.52□□□□□ -1.53
PAX6-245ENST00000638914 KRTAP12-1P59990 96 aa5.52□□□□□ -1.53
PAX6-245ENST00000638914 KRTAP15-1Q3LI76 137 aa5.5□□□□□ -1.53
PAX6-245ENST00000638914 LAMA5O15230 3695 aa5.47□□□□□ -1.53
PAX6-245ENST00000638914 ZFHX4Q86UP3 3567 aa5.47□□□□□ -1.53
PAX6-245ENST00000638914 MUC3AQ02505 3323 aa5.46□□□□□ -1.54
PAX6-245ENST00000638914 DMDP11532 3685 aa5.45□□□□□ -1.54
PAX6-245ENST00000638914 KRTAP3-1Q9BYR8 98 aa5.41□□□□□ -1.54
PAX6-245ENST00000638914 RELNP78509 3460 aa5.4□□□□□ -1.54
PAX6-245ENST00000638914 KRTAP10-12P60413 245 aa5.33□□□□□ -1.56
PAX6-245ENST00000638914 KRTAP10-6P60371 365 aaPredicted RBP5.29□□□□□ -1.56
PAX6-245ENST00000638914 KRTAP4-5Q9BYR2 181 aa5.27□□□□□ -1.57
PAX6-245ENST00000638914 KRTAP10-4P60372 401 aaPredicted RBP5.24□□□□□ -1.57
PAX6-245ENST00000638914 SMG1Q96Q15 3661 aaKnown RBP5.23□□□□□ -1.57
PAX6-245ENST00000638914 CRCT1Q9UGL9 99 aa5.13□□□□□ -1.59
PAX6-245ENST00000638914 KRTAP23-1A1A580 65 aa5.13□□□□□ -1.59
PAX6-245ENST00000638914 KRTAP12-3P60328 96 aa5.12□□□□□ -1.59
PAX6-245ENST00000638914 TRRAPQ9Y4A5 3859 aa5.11□□□□□ -1.59
PAX6-245ENST00000638914 KRTAP8-1Q8IUC2 63 aa5.08□□□□□ -1.6
PAX6-245ENST00000638914 KRTAP3-3Q9BYR6 98 aa5.08□□□□□ -1.6
PAX6-245ENST00000638914 KRTAP3-2Q9BYR7 98 aa5.07□□□□□ -1.6
PAX6-245ENST00000638914 CSMD2Q7Z408 3487 aa5.07□□□□□ -1.6
PAX6-245ENST00000638914 SPENQ96T58 3664 aaKnown RBP5.06□□□□□ -1.6
PAX6-245ENST00000638914 INE1O15225 51 aa5.04□□□□□ -1.6
PAX6-245ENST00000638914 CSMD1Q96PZ7 3565 aa5.04□□□□□ -1.6
PAX6-245ENST00000638914 ANK3Q12955 4377 aaKnown RBP5□□□□□ -1.61
PAX6-245ENST00000638914 BSNQ9UPA5 3926 aa4.95□□□□□ -1.62
PAX6-245ENST00000638914 LORP23490 312 aaPredicted RBP4.93□□□□□ -1.62
PAX6-245ENST00000638914 LCE3AQ5TA76 89 aa4.9□□□□□ -1.63
PAX6-245ENST00000638914 SVEP1Q4LDE5 3571 aa4.88□□□□□ -1.63
PAX6-245ENST00000638914 CUBNO60494 3623 aa4.86□□□□□ -1.63
PAX6-245ENST00000638914 ALMS1Q8TCU4 4167 aa4.84□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms